RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 PDE3BQ13370 1112 aa23.81■■□□□ 1.4
KDM1A-202ENST00000400181 BRPF3Q9ULD4 1205 aa23.81■■□□□ 1.4
KDM1A-202ENST00000400181 USP35Q9P2H5 1018 aa23.8■■□□□ 1.4
KDM1A-202ENST00000400181 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
KDM1A-202ENST00000400181 FBLN2P98095 1184 aa23.79■■□□□ 1.4
KDM1A-202ENST00000400181 TSPY4P0CV99 314 aa23.78■■□□□ 1.4
KDM1A-202ENST00000400181 TSPY10P0CW01 314 aa23.78■■□□□ 1.4
KDM1A-202ENST00000400181 GPATCH8Q9UKJ3 1502 aaKnown RBP23.77■■□□□ 1.4
KDM1A-202ENST00000400181 TROQ12816 1431 aaPredicted RBP23.77■■□□□ 1.4
KDM1A-202ENST00000400181 UHRF1BP1Q6BDS2 1440 aa23.76■■□□□ 1.39
KDM1A-202ENST00000400181 HNRNPMP52272 730 aaKnown RBP eCLIP23.75■■□□□ 1.396e-9■■■■□ 26.3
KDM1A-202ENST00000400181 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
KDM1A-202ENST00000400181 DDRGK1Q96HY6 314 aa23.75■■□□□ 1.39
KDM1A-202ENST00000400181 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
KDM1A-202ENST00000400181 KIAA0586Q9BVV6 1533 aa23.75■■□□□ 1.39
KDM1A-202ENST00000400181 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
KDM1A-202ENST00000400181 NFKBIBQ15653 356 aa23.75■■□□□ 1.39
KDM1A-202ENST00000400181 PANK3Q9H999 370 aa23.75■■□□□ 1.39
KDM1A-202ENST00000400181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.74■■□□□ 1.391e-7■■□□□ 13.9
KDM1A-202ENST00000400181 PLB1Q6P1J6 1458 aa23.74■■□□□ 1.39
KDM1A-202ENST00000400181 PARD3Q8TEW0 1356 aa23.73■■□□□ 1.39
KDM1A-202ENST00000400181 RGS3P49796 1198 aa23.73■■□□□ 1.39
KDM1A-202ENST00000400181 PER1O15534 1290 aaPredicted RBP23.72■■□□□ 1.39
KDM1A-202ENST00000400181 RAPGEF6Q8TEU7 1601 aa23.71■■□□□ 1.39
KDM1A-202ENST00000400181 GSE1Q14687 1217 aa23.7■■□□□ 1.39
KDM1A-202ENST00000400181 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
KDM1A-202ENST00000400181 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
KDM1A-202ENST00000400181 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
KDM1A-202ENST00000400181 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
KDM1A-202ENST00000400181 WASHC2CQ9Y4E1 1318 aa23.68■■□□□ 1.38
KDM1A-202ENST00000400181 FRAT1Q92837 279 aaPredicted RBP23.67■■□□□ 1.38
KDM1A-202ENST00000400181 C9orf84Q5VXU9 1444 aa23.67■■□□□ 1.38
KDM1A-202ENST00000400181 ADGRL2O95490 1459 aa23.65■■□□□ 1.38
KDM1A-202ENST00000400181 DISP3Q9P2K9 1392 aa23.65■■□□□ 1.38
KDM1A-202ENST00000400181 ADGBQ8N7X0 1667 aa23.64■■□□□ 1.37
KDM1A-202ENST00000400181 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
KDM1A-202ENST00000400181 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
KDM1A-202ENST00000400181 ARHGEF12Q9NZN5 1544 aa23.6■■□□□ 1.37
KDM1A-202ENST00000400181 FRAT2O75474 233 aaPredicted RBP23.59■■□□□ 1.37
KDM1A-202ENST00000400181 EIF5BO60841 1220 aaKnown RBP23.58■■□□□ 1.37
KDM1A-202ENST00000400181 FAM161AQ3B820 660 aa23.58■■□□□ 1.37
KDM1A-202ENST00000400181 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.37
KDM1A-202ENST00000400181 CENPQQ7L2Z9 268 aaPredicted RBP23.58■■□□□ 1.36
KDM1A-202ENST00000400181 TESK2Q96S53 571 aa23.58■■□□□ 1.36
KDM1A-202ENST00000400181 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
KDM1A-202ENST00000400181 KDM2BQ8NHM5 1336 aa23.57■■□□□ 1.36
KDM1A-202ENST00000400181 CCDC146Q8IYE0 955 aa23.57■■□□□ 1.36
KDM1A-202ENST00000400181 TMF1P82094 1093 aa23.56■■□□□ 1.36
KDM1A-202ENST00000400181 C8orf34Q49A92 452 aa23.56■■□□□ 1.36
KDM1A-202ENST00000400181 PRAG1Q86YV5 1406 aa23.55■■□□□ 1.36
KDM1A-202ENST00000400181 PLEKHH1Q9ULM0 1364 aa23.54■■□□□ 1.36
KDM1A-202ENST00000400181 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
KDM1A-202ENST00000400181 E9PCH4 1651 aa23.54■■□□□ 1.36
KDM1A-202ENST00000400181 BLMP54132 1417 aaPredicted RBP23.53■■□□□ 1.36
KDM1A-202ENST00000400181 KNSTRNQ9Y448 316 aa23.52■■□□□ 1.36
KDM1A-202ENST00000400181 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
KDM1A-202ENST00000400181 CROCC2H7BZ55 1655 aa23.52■■□□□ 1.36
KDM1A-202ENST00000400181 GOLGA2Q08379 1002 aa23.51■■□□□ 1.35
KDM1A-202ENST00000400181 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
KDM1A-202ENST00000400181 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
KDM1A-202ENST00000400181 ERBINQ96RT1 1412 aa23.49■■□□□ 1.35
KDM1A-202ENST00000400181 PPP2R1AP30153 589 aa23.49■■□□□ 1.35
KDM1A-202ENST00000400181 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.48■■□□□ 1.35
KDM1A-202ENST00000400181 KDM5DQ9BY66 1539 aa23.47■■□□□ 1.35
KDM1A-202ENST00000400181 BCAR3O75815 825 aa23.47■■□□□ 1.35
KDM1A-202ENST00000400181 COL17A1Q9UMD9 1497 aaPredicted RBP23.47■■□□□ 1.35
KDM1A-202ENST00000400181 ZMYM4Q5VZL5 1548 aa23.45■■□□□ 1.34
KDM1A-202ENST00000400181 SPINK5Q9NQ38 1064 aaPredicted RBP23.45■■□□□ 1.34
KDM1A-202ENST00000400181 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
KDM1A-202ENST00000400181 FAM135AQ9P2D6 1515 aa23.44■■□□□ 1.34
KDM1A-202ENST00000400181 ARXQ96QS3 562 aa23.43■■□□□ 1.34
KDM1A-202ENST00000400181 APAF1O14727 1248 aa23.43■■□□□ 1.34
KDM1A-202ENST00000400181 A2MP01023 1474 aa23.43■■□□□ 1.34
KDM1A-202ENST00000400181 CDC42BPAQ5VT25 1732 aa23.42■■□□□ 1.34
KDM1A-202ENST00000400181 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
KDM1A-202ENST00000400181 SLKQ9H2G2 1235 aaPredicted RBP23.42■■□□□ 1.34
KDM1A-202ENST00000400181 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
KDM1A-202ENST00000400181 CARMIL2Q6F5E8 1435 aa23.41■■□□□ 1.34
KDM1A-202ENST00000400181 PTPRGP23470 1445 aa23.41■■□□□ 1.34
KDM1A-202ENST00000400181 SLFN5Q08AF3 891 aa23.39■■□□□ 1.33
KDM1A-202ENST00000400181 SHANK2Q9UPX8 1470 aa23.39■■□□□ 1.33
KDM1A-202ENST00000400181 IGHDP01880 384 aa23.39■■□□□ 1.33
KDM1A-202ENST00000400181 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
KDM1A-202ENST00000400181 CANXP27824 592 aaKnown RBP23.38■■□□□ 1.33
KDM1A-202ENST00000400181 ATP10BO94823 1461 aa23.38■■□□□ 1.33
KDM1A-202ENST00000400181 PLA2R1Q13018 1463 aa23.37■■□□□ 1.33
KDM1A-202ENST00000400181 PLEKHH2Q8IVE3 1493 aa23.37■■□□□ 1.33
KDM1A-202ENST00000400181 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
KDM1A-202ENST00000400181 GPRASP1Q5JY77 1395 aa23.36■■□□□ 1.33
KDM1A-202ENST00000400181 SEC24BO95487 1268 aa23.36■■□□□ 1.33
KDM1A-202ENST00000400181 POGKQ9P215 609 aa23.35■■□□□ 1.33
KDM1A-202ENST00000400181 ADCY10Q96PN6 1610 aa23.35■■□□□ 1.33
KDM1A-202ENST00000400181 AMER1Q5JTC6 1135 aaPredicted RBP23.35■■□□□ 1.33
KDM1A-202ENST00000400181 DMRT2Q9Y5R5 561 aa23.34■■□□□ 1.33
KDM1A-202ENST00000400181 MAGI2Q86UL8 1455 aa23.34■■□□□ 1.33
KDM1A-202ENST00000400181 ZNF521Q96K83 1311 aa23.34■■□□□ 1.33
KDM1A-202ENST00000400181 NEUROD2Q15784 382 aa23.34■■□□□ 1.33
KDM1A-202ENST00000400181 COG6Q9Y2V7 657 aa23.34■■□□□ 1.33
KDM1A-202ENST00000400181 PANK1Q8TE04 598 aa23.33■■□□□ 1.33
KDM1A-202ENST00000400181 CCDC141Q6ZP82 1450 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms