RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 CAVIN1Q6NZI2 390 aaKnown RBP10.3□□□□□ -0.76
CHD8-201ENST00000399982 RAD21O60216 631 aa10.3□□□□□ -0.76
CHD8-201ENST00000399982 STK11IPQ8N1F8 1099 aa10.3□□□□□ -0.76
CHD8-201ENST00000399982 CHMP5Q9NZZ3 219 aa10.3□□□□□ -0.76
CHD8-201ENST00000399982 CCDC39Q9UFE4 941 aa10.3□□□□□ -0.76
CHD8-201ENST00000399982 USP8P40818 1118 aa10.3□□□□□ -0.76
CHD8-201ENST00000399982 RGL3Q3MIN7 710 aa10.3□□□□□ -0.76
CHD8-201ENST00000399982 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
CHD8-201ENST00000399982 SETD5Q9C0A6 1442 aa10.3□□□□□ -0.76
CHD8-201ENST00000399982 PDE4AP27815 886 aa10.29□□□□□ -0.76
CHD8-201ENST00000399982 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
CHD8-201ENST00000399982 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
CHD8-201ENST00000399982 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
CHD8-201ENST00000399982 ZBED9Q6R2W3 1325 aa10.29□□□□□ -0.76
CHD8-201ENST00000399982 FAM13BQ9NYF5 915 aa10.29□□□□□ -0.76
CHD8-201ENST00000399982 POGKQ9P215 609 aa10.29□□□□□ -0.76
CHD8-201ENST00000399982 PAF1Q8N7H5 531 aa10.29□□□□□ -0.76
CHD8-201ENST00000399982 CCDC9Q9Y3X0 531 aaKnown RBP10.29□□□□□ -0.76
CHD8-201ENST00000399982 FRAT2O75474 233 aaPredicted RBP10.28□□□□□ -0.76
CHD8-201ENST00000399982 DDX49Q9Y6V7 483 aaKnown RBP10.28□□□□□ -0.76
CHD8-201ENST00000399982 TPM1P09493 284 aa10.28□□□□□ -0.76
CHD8-201ENST00000399982 SF3A1Q15459 793 aaKnown RBP10.28□□□□□ -0.76
CHD8-201ENST00000399982 ERCC4Q92889 916 aaPredicted RBP10.28□□□□□ -0.76
CHD8-201ENST00000399982 NOL8Q76FK4 1167 aaKnown RBP10.28□□□□□ -0.76
CHD8-201ENST00000399982 ZNF592Q92610 1267 aa10.27□□□□□ -0.77
CHD8-201ENST00000399982 GOLGA6L19H0YKK7 550 aa10.27□□□□□ -0.77
CHD8-201ENST00000399982 PDCL2Q8N4E4 241 aa10.27□□□□□ -0.77
CHD8-201ENST00000399982 RTF1Q92541 710 aaKnown RBP10.27□□□□□ -0.77
CHD8-201ENST00000399982 EIF3AQ14152 1382 aaKnown RBP10.27□□□□□ -0.77
CHD8-201ENST00000399982 HSP90B2PQ58FF3 399 aa10.26□□□□□ -0.77
CHD8-201ENST00000399982 CCDC191Q8NCU4 936 aa10.26□□□□□ -0.77
CHD8-201ENST00000399982 RUFY1Q96T51 708 aa10.26□□□□□ -0.77
CHD8-201ENST00000399982 RDXP35241 583 aaKnown RBP10.26□□□□□ -0.77
CHD8-201ENST00000399982 NUCB2P80303 420 aa10.26□□□□□ -0.77
CHD8-201ENST00000399982 DCTN1Q14203 1278 aa10.26□□□□□ -0.77
CHD8-201ENST00000399982 TRIM6-TRIM34B2RNG4 842 aa10.26□□□□□ -0.77
CHD8-201ENST00000399982 CGNL1Q0VF96 1302 aa10.26□□□□□ -0.77
CHD8-201ENST00000399982 CT47A1Q5JQC4 288 aaPredicted RBP10.25□□□□□ -0.77
CHD8-201ENST00000399982 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
CHD8-201ENST00000399982 FOXD4L4Q8WXT5 416 aaPredicted RBP10.25□□□□□ -0.77
CHD8-201ENST00000399982 GPATCH3Q96I76 525 aa10.25□□□□□ -0.77
CHD8-201ENST00000399982 CCP110O43303 1012 aa10.25□□□□□ -0.77
CHD8-201ENST00000399982 ZFYVE27Q5T4F4 411 aa10.25□□□□□ -0.77
CHD8-201ENST00000399982 UBE2Q2Q8WVN8 375 aa10.25□□□□□ -0.77
CHD8-201ENST00000399982 SKIDA1Q1XH10 827 aa10.25□□□□□ -0.77
CHD8-201ENST00000399982 LETM1O95202 739 aaPredicted RBP10.24□□□□□ -0.77
CHD8-201ENST00000399982 CC2D1BQ5T0F9 858 aaKnown RBP10.24□□□□□ -0.77
CHD8-201ENST00000399982 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
CHD8-201ENST00000399982 NAP1L1P55209 391 aaKnown RBP10.24□□□□□ -0.77
CHD8-201ENST00000399982 TRIM34Q9BYJ4 488 aa10.24□□□□□ -0.77
CHD8-201ENST00000399982 CCDC173Q0VFZ6 552 aa10.24□□□□□ -0.77
CHD8-201ENST00000399982 HSP90AB2PQ58FF8 381 aa10.24□□□□□ -0.77
CHD8-201ENST00000399982 CCDC97Q96F63 343 aaPredicted RBP10.23□□□□□ -0.77
CHD8-201ENST00000399982 NLRP13Q86W25 1043 aa10.23□□□□□ -0.77
CHD8-201ENST00000399982 VPS8Q8N3P4 1428 aa10.23□□□□□ -0.77
CHD8-201ENST00000399982 DHX37Q8IY37 1157 aaKnown RBP10.22□□□□□ -0.77
CHD8-201ENST00000399982 H3BQV1 296 aa10.22□□□□□ -0.77
CHD8-201ENST00000399982 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
CHD8-201ENST00000399982 BECN2A8MW95 431 aa10.21□□□□□ -0.77
CHD8-201ENST00000399982 HOMER1Q86YM7 354 aa10.21□□□□□ -0.77
CHD8-201ENST00000399982 KIF27Q86VH2 1401 aa10.21□□□□□ -0.77
CHD8-201ENST00000399982 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.78
CHD8-201ENST00000399982 HSP90AB3PQ58FF7 597 aa10.21□□□□□ -0.78
CHD8-201ENST00000399982 SEPT11Q9NVA2 429 aaKnown RBP10.21□□□□□ -0.78
CHD8-201ENST00000399982 MFAP1P55081 439 aaKnown RBP10.21□□□□□ -0.78
CHD8-201ENST00000399982 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.78
CHD8-201ENST00000399982 CSB-PGBD3P0DP91 1061 aa10.2□□□□□ -0.78
CHD8-201ENST00000399982 PABPN1Q86U42 306 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD8-201ENST00000399982 IPO7O95373 1038 aaKnown RBP10.2□□□□□ -0.78
CHD8-201ENST00000399982 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
CHD8-201ENST00000399982 CCDC43Q96MW1 224 aaKnown RBP10.2□□□□□ -0.78
CHD8-201ENST00000399982 RRP7BPQ9NSQ0 103 aa10.2□□□□□ -0.78
CHD8-201ENST00000399982 MBD3O95983 291 aa10.2□□□□□ -0.78
CHD8-201ENST00000399982 PAK3O75914 559 aaPredicted RBP10.2□□□□□ -0.78
CHD8-201ENST00000399982 LEKR1Q6ZMV7 388 aa10.2□□□□□ -0.78
CHD8-201ENST00000399982 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
CHD8-201ENST00000399982 PPM1FP49593 454 aaPredicted RBP10.19□□□□□ -0.78
CHD8-201ENST00000399982 SAMD1Q6SPF0 538 aaPredicted RBP10.19□□□□□ -0.78
CHD8-201ENST00000399982 REC8O95072 547 aa10.19□□□□□ -0.78
CHD8-201ENST00000399982 ZRSR2Q15696 482 aaKnown RBP10.19□□□□□ -0.78
CHD8-201ENST00000399982 KCNH8Q96L42 1107 aa10.19□□□□□ -0.78
CHD8-201ENST00000399982 H0YHG0 523 aa10.19□□□□□ -0.78
CHD8-201ENST00000399982 KIF15Q9NS87 1388 aa10.19□□□□□ -0.78
CHD8-201ENST00000399982 NASPP49321 788 aaPredicted RBP10.18□□□□□ -0.78
CHD8-201ENST00000399982 RB1CC1Q8TDY2 1594 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 HOOK1Q9UJC3 728 aaKnown RBP10.18□□□□□ -0.78
CHD8-201ENST00000399982 CENPJQ9HC77 1338 aaPredicted RBP10.18□□□□□ -0.78
CHD8-201ENST00000399982 ANKRD62A6NC57 917 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 GTF2E1P29083 439 aaPredicted RBP10.18□□□□□ -0.78
CHD8-201ENST00000399982 NFKBIBQ15653 356 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 MNS1Q8NEH6 495 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 DEF6Q9H4E7 631 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 HSPA5P11021 654 aaKnown RBP10.18□□□□□ -0.78
CHD8-201ENST00000399982 NEFHP12036 1026 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 R3HCC1Q9Y3T6 440 aaKnown RBP10.18□□□□□ -0.78
CHD8-201ENST00000399982 ANKRD20A12PQ8NF67 263 aa10.18□□□□□ -0.78
CHD8-201ENST00000399982 WRNQ14191 1432 aaPredicted RBP eCLIP10.17□□□□□ -0.78
CHD8-201ENST00000399982 FOXD4L6Q3SYB3 417 aaPredicted RBP10.17□□□□□ -0.78
CHD8-201ENST00000399982 FOXD4L3Q6VB84 417 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms