RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 RNF17Q9BXT8 1623 aaKnown RBP24.1■■□□□ 1.45
TNRC18-202ENST00000399434 IQGAP3Q86VI3 1631 aa24.08■■□□□ 1.45
TNRC18-202ENST00000399434 MYT1LQ9UL68 1186 aa24.08■■□□□ 1.45
TNRC18-202ENST00000399434 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
TNRC18-202ENST00000399434 ATP10AO60312 1499 aa24.04■■□□□ 1.44
TNRC18-202ENST00000399434 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
TNRC18-202ENST00000399434 FAM135AQ9P2D6 1515 aa24.02■■□□□ 1.44
TNRC18-202ENST00000399434 CCER1Q8TC90 406 aaPredicted RBP24.02■■□□□ 1.44
TNRC18-202ENST00000399434 TRIM52Q96A61 297 aa24■■□□□ 1.43
TNRC18-202ENST00000399434 AGLP35573 1532 aa23.99■■□□□ 1.43
TNRC18-202ENST00000399434 NUP155O75694 1391 aa23.98■■□□□ 1.43
TNRC18-202ENST00000399434 ACIN1Q9UKV3 1341 aaKnown RBP23.98■■□□□ 1.43
TNRC18-202ENST00000399434 CEP152O94986 1710 aa23.98■■□□□ 1.43
TNRC18-202ENST00000399434 KIF3BO15066 747 aa23.94■■□□□ 1.42
TNRC18-202ENST00000399434 MPHOSPH9Q99550 1183 aa23.94■■□□□ 1.42
TNRC18-202ENST00000399434 TET3O43151 1660 aa23.94■■□□□ 1.42
TNRC18-202ENST00000399434 E9PCH4 1651 aa23.92■■□□□ 1.42
TNRC18-202ENST00000399434 LMTK2Q8IWU2 1503 aa23.9■■□□□ 1.42
TNRC18-202ENST00000399434 ABCC3O15438 1527 aa23.89■■□□□ 1.42
TNRC18-202ENST00000399434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.42
TNRC18-202ENST00000399434 ZC3H13Q5T200 1668 aaKnown RBP23.89■■□□□ 1.42
TNRC18-202ENST00000399434 CLSPNQ9HAW4 1339 aa23.89■■□□□ 1.41
TNRC18-202ENST00000399434 SLC4A1APQ9BWU0 796 aaKnown RBP23.88■■□□□ 1.41
TNRC18-202ENST00000399434 EFCAB6Q5THR3 1501 aa23.88■■□□□ 1.41
TNRC18-202ENST00000399434 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
TNRC18-202ENST00000399434 FOXD1Q16676 465 aa23.85■■□□□ 1.41
TNRC18-202ENST00000399434 PKD2Q13563 968 aa23.83■■□□□ 1.41
TNRC18-202ENST00000399434 KANK1Q14678 1352 aa23.83■■□□□ 1.41
TNRC18-202ENST00000399434 ANKRD30BQ9BXX2 1392 aa23.82■■□□□ 1.4
TNRC18-202ENST00000399434 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
TNRC18-202ENST00000399434 CLTCQ00610 1675 aaKnown RBP23.8■■□□□ 1.4
TNRC18-202ENST00000399434 GGT6Q6P531 493 aa23.8■■□□□ 1.4
TNRC18-202ENST00000399434 PLA2R1Q13018 1463 aa23.78■■□□□ 1.4
TNRC18-202ENST00000399434 SIN3AQ96ST3 1273 aa23.76■■□□□ 1.39
TNRC18-202ENST00000399434 NPATQ14207 1427 aa23.74■■□□□ 1.39
TNRC18-202ENST00000399434 TRPM2O94759 1503 aa23.73■■□□□ 1.39
TNRC18-202ENST00000399434 RPRD2Q5VT52 1461 aaKnown RBP23.72■■□□□ 1.39
TNRC18-202ENST00000399434 PTPRTO14522 1441 aa23.71■■□□□ 1.39
TNRC18-202ENST00000399434 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
TNRC18-202ENST00000399434 WASHC2CQ9Y4E1 1318 aa23.7■■□□□ 1.38
TNRC18-202ENST00000399434 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
TNRC18-202ENST00000399434 CLTCL1P53675 1640 aa23.7■■□□□ 1.38
TNRC18-202ENST00000399434 PREX1Q8TCU6 1659 aa23.69■■□□□ 1.38
TNRC18-202ENST00000399434 MROH2AA6NES4 1674 aa23.69■■□□□ 1.38
TNRC18-202ENST00000399434 CFAP65Q6ZU64 1925 aaKnown RBP23.68■■□□□ 1.38
TNRC18-202ENST00000399434 MLECQ14165 292 aa23.68■■□□□ 1.38
TNRC18-202ENST00000399434 ZEB1P37275 1124 aaPredicted RBP23.67■■□□□ 1.38
TNRC18-202ENST00000399434 SYNMO15061 1565 aa23.67■■□□□ 1.38
TNRC18-202ENST00000399434 ARID4BQ4LE39 1312 aaPredicted RBP23.66■■□□□ 1.38
TNRC18-202ENST00000399434 UGGT1Q9NYU2 1555 aa23.65■■□□□ 1.38
TNRC18-202ENST00000399434 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
TNRC18-202ENST00000399434 NEUROD1Q13562 356 aa23.64■■□□□ 1.38
TNRC18-202ENST00000399434 NOS1P29475 1434 aa23.64■■□□□ 1.37
TNRC18-202ENST00000399434 ADAMTSL3P82987 1691 aa23.63■■□□□ 1.37
TNRC18-202ENST00000399434 PIK3C2BO00750 1634 aa23.63■■□□□ 1.37
TNRC18-202ENST00000399434 MADDQ8WXG6 1647 aa23.62■■□□□ 1.37
TNRC18-202ENST00000399434 CCDC144AA2RUR9 1427 aa23.6■■□□□ 1.37
TNRC18-202ENST00000399434 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
TNRC18-202ENST00000399434 SPATA31D1Q6ZQQ2 1576 aa23.6■■□□□ 1.37
TNRC18-202ENST00000399434 C3P01024 1663 aa23.6■■□□□ 1.37
TNRC18-202ENST00000399434 CNTLNQ9NXG0 1405 aa23.59■■□□□ 1.37
TNRC18-202ENST00000399434 RIMS1Q86UR5 1692 aaKnown RBP23.58■■□□□ 1.36
TNRC18-202ENST00000399434 KIF1BO60333 1816 aa23.55■■□□□ 1.36
TNRC18-202ENST00000399434 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
TNRC18-202ENST00000399434 SPATA31E1Q6ZUB1 1445 aa23.54■■□□□ 1.36
TNRC18-202ENST00000399434 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
TNRC18-202ENST00000399434 NEURL4Q96JN8 1562 aa23.53■■□□□ 1.36
TNRC18-202ENST00000399434 ADGRB3O60242 1522 aa23.52■■□□□ 1.36
TNRC18-202ENST00000399434 FBXO31Q5XUX0 539 aaPredicted RBP23.49■■□□□ 1.35
TNRC18-202ENST00000399434 TIMELESSQ9UNS1 1208 aa23.49■■□□□ 1.35
TNRC18-202ENST00000399434 IFT172Q9UG01 1749 aa23.49■■□□□ 1.35
TNRC18-202ENST00000399434 MYO5BQ9ULV0 1848 aa23.49■■□□□ 1.35
TNRC18-202ENST00000399434 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
TNRC18-202ENST00000399434 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
TNRC18-202ENST00000399434 TMEM131LA2VDJ0 1609 aa23.45■■□□□ 1.35
TNRC18-202ENST00000399434 PPLO60437 1756 aa23.41■■□□□ 1.34
TNRC18-202ENST00000399434 PPP1R15AO75807 674 aaPredicted RBP23.41■■□□□ 1.34
TNRC18-202ENST00000399434 CEBPAP49715 358 aaPredicted RBP23.39■■□□□ 1.34
TNRC18-202ENST00000399434 TNRQ92752 1358 aa23.39■■□□□ 1.33
TNRC18-202ENST00000399434 MYO3AQ8NEV4 1616 aa23.39■■□□□ 1.33
TNRC18-202ENST00000399434 IDI1Q13907 227 aa23.37■■□□□ 1.33
TNRC18-202ENST00000399434 KDM5AP29375 1690 aaKnown RBP23.37■■□□□ 1.33
TNRC18-202ENST00000399434 UHRF1BP1Q6BDS2 1440 aa23.36■■□□□ 1.33
TNRC18-202ENST00000399434 UBR1Q8IWV7 1749 aa23.36■■□□□ 1.33
TNRC18-202ENST00000399434 NEXMIFQ5QGS0 1516 aa23.36■■□□□ 1.33
TNRC18-202ENST00000399434 RGL3Q3MIN7 710 aa23.36■■□□□ 1.33
TNRC18-202ENST00000399434 SLC52A1Q9NWF4 448 aa23.36■■□□□ 1.33
TNRC18-202ENST00000399434 PTPRMP28827 1452 aa23.34■■□□□ 1.33
TNRC18-202ENST00000399434 NBPF8Q3BBV2 869 aa23.33■■□□□ 1.33
TNRC18-202ENST00000399434 MYOM2P54296 1465 aa23.33■■□□□ 1.32
TNRC18-202ENST00000399434 TRPM1Q7Z4N2 1603 aa23.32■■□□□ 1.32
TNRC18-202ENST00000399434 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
TNRC18-202ENST00000399434 KDM4FA0A1W2PPD8 638 aa23.31■■□□□ 1.32
TNRC18-202ENST00000399434 NLRP1Q9C000 1473 aa23.31■■□□□ 1.32
TNRC18-202ENST00000399434 PRAG1Q86YV5 1406 aa23.31■■□□□ 1.32
TNRC18-202ENST00000399434 ZNF142P52746 1687 aaPredicted RBP23.31■■□□□ 1.32
TNRC18-202ENST00000399434 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
TNRC18-202ENST00000399434 NRXN1Q9ULB1 1477 aa23.28■■□□□ 1.32
TNRC18-202ENST00000399434 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
TNRC18-202ENST00000399434 RALGAPBQ86X10 1494 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms