RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ATMINO43313 823 aaPredicted RBP18.68■□□□□ 0.58
SMIM11A-201ENST00000399292 MYT1LQ9UL68 1186 aa18.68■□□□□ 0.58
SMIM11A-201ENST00000399292 ZMYM4Q5VZL5 1548 aa18.68■□□□□ 0.58
SMIM11A-201ENST00000399292 MAP3K13O43283 966 aa18.67■□□□□ 0.58
SMIM11A-201ENST00000399292 ZNF777Q9ULD5 760 aaPredicted RBP18.67■□□□□ 0.58
SMIM11A-201ENST00000399292 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
SMIM11A-201ENST00000399292 ZFYVE16Q7Z3T8 1539 aa18.66■□□□□ 0.58
SMIM11A-201ENST00000399292 CFDP1Q9UEE9 299 aaPredicted RBP18.66■□□□□ 0.58
SMIM11A-201ENST00000399292 ZNF518AQ6AHZ1 1483 aa18.65■□□□□ 0.58
SMIM11A-201ENST00000399292 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
SMIM11A-201ENST00000399292 ARHGEF40Q8TER5 1519 aa18.64■□□□□ 0.58
SMIM11A-201ENST00000399292 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
SMIM11A-201ENST00000399292 CDC42BPBQ9Y5S2 1711 aa18.63■□□□□ 0.57
SMIM11A-201ENST00000399292 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
SMIM11A-201ENST00000399292 PREX2Q70Z35 1606 aa18.62■□□□□ 0.57
SMIM11A-201ENST00000399292 ATP10AO60312 1499 aa18.61■□□□□ 0.57
SMIM11A-201ENST00000399292 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
SMIM11A-201ENST00000399292 FAM212AQ96EL1 285 aa18.61■□□□□ 0.57
SMIM11A-201ENST00000399292 HNRNPMP52272 730 aaKnown RBP eCLIP18.6■□□□□ 0.57
SMIM11A-201ENST00000399292 MLECQ14165 292 aa18.6■□□□□ 0.57
SMIM11A-201ENST00000399292 ARHGEF12Q9NZN5 1544 aa18.59■□□□□ 0.57
SMIM11A-201ENST00000399292 TRAPPC8Q9Y2L5 1435 aa18.59■□□□□ 0.57
SMIM11A-201ENST00000399292 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
SMIM11A-201ENST00000399292 ADAMTSL3P82987 1691 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 SLC39A7Q92504 469 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 TRPC6Q9Y210 931 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 ABCC1P33527 1531 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 EHBP1L1Q8N3D4 1523 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 PTPRMP28827 1452 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 MLH3Q9UHC1 1453 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 BCORL1Q5H9F3 1711 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
SMIM11A-201ENST00000399292 KDM5CP41229 1560 aa18.56■□□□□ 0.56
SMIM11A-201ENST00000399292 POTEB2H3BUK9 544 aa18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 C7P10643 843 aa18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 VASPP50552 380 aaPredicted RBP18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 SGIP1Q9BQI5 828 aa18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 METRNQ9UJH8 293 aa18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 HECW2Q9P2P5 1572 aa18.55■□□□□ 0.56
SMIM11A-201ENST00000399292 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
SMIM11A-201ENST00000399292 SPAG9O60271 1321 aaKnown RBP18.53■□□□□ 0.56
SMIM11A-201ENST00000399292 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
SMIM11A-201ENST00000399292 TIE1P35590 1138 aa18.53■□□□□ 0.56
SMIM11A-201ENST00000399292 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
SMIM11A-201ENST00000399292 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
SMIM11A-201ENST00000399292 PCDHB13Q9Y5F0 798 aa18.51■□□□□ 0.55
SMIM11A-201ENST00000399292 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
SMIM11A-201ENST00000399292 MADDQ8WXG6 1647 aa18.5■□□□□ 0.55
SMIM11A-201ENST00000399292 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
SMIM11A-201ENST00000399292 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
SMIM11A-201ENST00000399292 SYCP2Q9BX26 1530 aa18.49■□□□□ 0.55
SMIM11A-201ENST00000399292 KANK4Q5T7N3 995 aaPredicted RBP18.49■□□□□ 0.55
SMIM11A-201ENST00000399292 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
SMIM11A-201ENST00000399292 SIGLEC1Q9BZZ2 1709 aa18.48■□□□□ 0.55
SMIM11A-201ENST00000399292 DIP2CQ9Y2E4 1556 aa18.47■□□□□ 0.55
SMIM11A-201ENST00000399292 MAP3K1Q13233 1512 aa18.47■□□□□ 0.55
SMIM11A-201ENST00000399292 SUPT6HQ7KZ85 1726 aaKnown RBP18.46■□□□□ 0.55
SMIM11A-201ENST00000399292 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
SMIM11A-201ENST00000399292 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
SMIM11A-201ENST00000399292 ESF1Q9H501 851 aaKnown RBP18.45■□□□□ 0.54
SMIM11A-201ENST00000399292 REREQ9P2R6 1566 aa18.44■□□□□ 0.54
SMIM11A-201ENST00000399292 DCAF8Q5TAQ9 597 aa18.44■□□□□ 0.54
SMIM11A-201ENST00000399292 ABCA6Q8N139 1617 aa18.44■□□□□ 0.54
SMIM11A-201ENST00000399292 KIDINS220Q9ULH0 1771 aa18.43■□□□□ 0.54
SMIM11A-201ENST00000399292 KLHL34Q8N239 644 aa18.43■□□□□ 0.54
SMIM11A-201ENST00000399292 MBD5Q9P267 1494 aa18.43■□□□□ 0.54
SMIM11A-201ENST00000399292 RIMS1Q86UR5 1692 aaKnown RBP18.43■□□□□ 0.54
SMIM11A-201ENST00000399292 AGLP35573 1532 aa18.41■□□□□ 0.54
SMIM11A-201ENST00000399292 TTLL13PA6NNM8 815 aa18.41■□□□□ 0.54
SMIM11A-201ENST00000399292 CEBPAP49715 358 aaPredicted RBP18.4■□□□□ 0.54
SMIM11A-201ENST00000399292 IFNL1Q8IU54 200 aa18.4■□□□□ 0.54
SMIM11A-201ENST00000399292 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
SMIM11A-201ENST00000399292 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
SMIM11A-201ENST00000399292 ATP7AQ04656 1500 aa18.39■□□□□ 0.53
SMIM11A-201ENST00000399292 RTEL1-TNFRSF6BF6WH68 1400 aa18.38■□□□□ 0.53
SMIM11A-201ENST00000399292 A2MP01023 1474 aa18.37■□□□□ 0.53
SMIM11A-201ENST00000399292 CAMSAP2Q08AD1 1489 aa18.37■□□□□ 0.53
SMIM11A-201ENST00000399292 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
SMIM11A-201ENST00000399292 CCDC141Q6ZP82 1450 aa18.35■□□□□ 0.53
SMIM11A-201ENST00000399292 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
SMIM11A-201ENST00000399292 MIA2Q96PC5 1412 aa18.34■□□□□ 0.53
SMIM11A-201ENST00000399292 GGT6Q6P531 493 aa18.34■□□□□ 0.53
SMIM11A-201ENST00000399292 MYOM3Q5VTT5 1437 aa18.33■□□□□ 0.53
SMIM11A-201ENST00000399292 DHX29Q7Z478 1369 aaKnown RBP18.32■□□□□ 0.52
SMIM11A-201ENST00000399292 PYGBP11216 843 aa18.32■□□□□ 0.52
SMIM11A-201ENST00000399292 LMTK3Q96Q04 1460 aa18.32■□□□□ 0.52
SMIM11A-201ENST00000399292 CNTLNQ9NXG0 1405 aa18.32■□□□□ 0.52
SMIM11A-201ENST00000399292 POTEJP0CG39 1038 aa18.31■□□□□ 0.52
SMIM11A-201ENST00000399292 HSPA2P54652 639 aa18.31■□□□□ 0.52
SMIM11A-201ENST00000399292 POTEFA5A3E0 1075 aa18.3■□□□□ 0.52
SMIM11A-201ENST00000399292 GSE1Q14687 1217 aa18.29■□□□□ 0.52
SMIM11A-201ENST00000399292 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
SMIM11A-201ENST00000399292 KIF3BO15066 747 aa18.28■□□□□ 0.52
SMIM11A-201ENST00000399292 PLXNC1O60486 1568 aa18.28■□□□□ 0.52
SMIM11A-201ENST00000399292 ARHGEF5Q12774 1597 aa18.28■□□□□ 0.52
SMIM11A-201ENST00000399292 ZMYM3Q14202 1370 aa18.28■□□□□ 0.52
SMIM11A-201ENST00000399292 MAMSTRQ6ZN01 415 aa18.26■□□□□ 0.51
SMIM11A-201ENST00000399292 TMEM106CQ9BVX2 250 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms