RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 IQGAP3Q86VI3 1631 aa21.59■■□□□ 1.05
COL25A1-201ENST00000399126 KIDINS220Q9ULH0 1771 aa21.58■■□□□ 1.05
COL25A1-201ENST00000399126 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.04
COL25A1-201ENST00000399126 CFAP74Q9C0B2 1584 aa21.57■■□□□ 1.04
COL25A1-201ENST00000399126 ZNF518AQ6AHZ1 1483 aa21.56■■□□□ 1.04
COL25A1-201ENST00000399126 MAP3K4Q9Y6R4 1608 aa21.56■■□□□ 1.04
COL25A1-201ENST00000399126 NBPF8Q3BBV2 869 aa21.55■■□□□ 1.04
COL25A1-201ENST00000399126 POGZQ7Z3K3 1410 aa21.55■■□□□ 1.04
COL25A1-201ENST00000399126 MIER1Q8N108 512 aa21.55■■□□□ 1.04
COL25A1-201ENST00000399126 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
COL25A1-201ENST00000399126 PLA2R1Q13018 1463 aa21.52■■□□□ 1.03
COL25A1-201ENST00000399126 KDM5CP41229 1560 aa21.51■■□□□ 1.03
COL25A1-201ENST00000399126 FAM69CQ0P6D2 419 aa21.51■■□□□ 1.03
COL25A1-201ENST00000399126 DIP2BQ9P265 1576 aa21.51■■□□□ 1.03
COL25A1-201ENST00000399126 NEO1Q92859 1461 aa21.5■■□□□ 1.03
COL25A1-201ENST00000399126 KIF3BO15066 747 aa21.49■■□□□ 1.03
COL25A1-201ENST00000399126 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
COL25A1-201ENST00000399126 GLI2P10070 1586 aa21.49■■□□□ 1.03
COL25A1-201ENST00000399126 TSPOAP1O95153 1857 aa21.49■■□□□ 1.03
COL25A1-201ENST00000399126 DHX29Q7Z478 1369 aaKnown RBP21.48■■□□□ 1.03
COL25A1-201ENST00000399126 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
COL25A1-201ENST00000399126 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
COL25A1-201ENST00000399126 HECW2Q9P2P5 1572 aa21.46■■□□□ 1.03
COL25A1-201ENST00000399126 E9PCH4 1651 aa21.45■■□□□ 1.02
COL25A1-201ENST00000399126 MROH1Q8NDA8 1641 aa21.45■■□□□ 1.02
COL25A1-201ENST00000399126 CCDC144AA2RUR9 1427 aa21.44■■□□□ 1.02
COL25A1-201ENST00000399126 MLH3Q9UHC1 1453 aa21.44■■□□□ 1.02
COL25A1-201ENST00000399126 ABCA6Q8N139 1617 aa21.44■■□□□ 1.02
COL25A1-201ENST00000399126 FRMPD1Q5SYB0 1578 aa21.43■■□□□ 1.02
COL25A1-201ENST00000399126 EIF2AK4Q9P2K8 1649 aaKnown RBP21.43■■□□□ 1.02
COL25A1-201ENST00000399126 A2MP01023 1474 aa21.43■■□□□ 1.02
COL25A1-201ENST00000399126 RICTORQ6R327 1708 aa21.43■■□□□ 1.02
COL25A1-201ENST00000399126 HSPA5P11021 654 aaKnown RBP21.42■■□□□ 1.02
COL25A1-201ENST00000399126 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
COL25A1-201ENST00000399126 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
COL25A1-201ENST00000399126 KDM2AQ9Y2K7 1162 aa21.4■■□□□ 1.02
COL25A1-201ENST00000399126 PRDM15P57071 1507 aaPredicted RBP21.4■■□□□ 1.02
COL25A1-201ENST00000399126 VWDEQ8N2E2 1590 aa21.4■■□□□ 1.02
COL25A1-201ENST00000399126 RGL3Q3MIN7 710 aa21.39■■□□□ 1.01
COL25A1-201ENST00000399126 DCAF11Q8TEB1 546 aa21.38■■□□□ 1.01
COL25A1-201ENST00000399126 TET3O43151 1660 aa21.37■■□□□ 1.01
COL25A1-201ENST00000399126 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL25A1-201ENST00000399126 ATP10AO60312 1499 aa21.36■■□□□ 1.01
COL25A1-201ENST00000399126 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
COL25A1-201ENST00000399126 KANK1Q14678 1352 aa21.36■■□□□ 1.01
COL25A1-201ENST00000399126 YEATS2Q9ULM3 1422 aa21.35■■□□□ 1.01
COL25A1-201ENST00000399126 DIP2CQ9Y2E4 1556 aa21.35■■□□□ 1.01
COL25A1-201ENST00000399126 CEP152O94986 1710 aa21.34■■□□□ 1.01
COL25A1-201ENST00000399126 SPHKAPQ2M3C7 1700 aa21.34■■□□□ 1.01
COL25A1-201ENST00000399126 PLEKHG5O94827 1062 aa21.33■■□□□ 1.01
COL25A1-201ENST00000399126 GGT6Q6P531 493 aa21.33■■□□□ 1.01
COL25A1-201ENST00000399126 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1
COL25A1-201ENST00000399126 UHRF1BP1Q6BDS2 1440 aa21.32■■□□□ 1
COL25A1-201ENST00000399126 TRPM2O94759 1503 aa21.3■■□□□ 1
COL25A1-201ENST00000399126 SPATA31E1Q6ZUB1 1445 aa21.29■■□□□ 1
COL25A1-201ENST00000399126 C11orf95C9JLR9 678 aaPredicted RBP21.29■■□□□ 1
COL25A1-201ENST00000399126 WASHC2AQ641Q2 1341 aa21.29■■□□□ 1
COL25A1-201ENST00000399126 CLTCL1P53675 1640 aa21.29■■□□□ 1
COL25A1-201ENST00000399126 PTPRTO14522 1441 aa21.29■■□□□ 1
COL25A1-201ENST00000399126 CFAP65Q6ZU64 1925 aaKnown RBP21.29■■□□□ 1
COL25A1-201ENST00000399126 EFCAB6Q5THR3 1501 aa21.28■■□□□ 1
COL25A1-201ENST00000399126 UGGT1Q9NYU2 1555 aa21.28■■□□□ 1
COL25A1-201ENST00000399126 RALGAPBQ86X10 1494 aa21.27■■□□□ 1
COL25A1-201ENST00000399126 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
COL25A1-201ENST00000399126 ARXQ96QS3 562 aa21.26■□□□□ 0.99
COL25A1-201ENST00000399126 BCORL1Q5H9F3 1711 aa21.26■□□□□ 0.99
COL25A1-201ENST00000399126 PRAG1Q86YV5 1406 aa21.25■□□□□ 0.99
COL25A1-201ENST00000399126 USP47Q96K76 1375 aa21.25■□□□□ 0.99
COL25A1-201ENST00000399126 LMTK2Q8IWU2 1503 aa21.23■□□□□ 0.99
COL25A1-201ENST00000399126 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
COL25A1-201ENST00000399126 COL17A1Q9UMD9 1497 aaPredicted RBP21.23■□□□□ 0.99
COL25A1-201ENST00000399126 CARD11Q9BXL7 1154 aa21.22■□□□□ 0.99
COL25A1-201ENST00000399126 TRPM1Q7Z4N2 1603 aa21.21■□□□□ 0.99
COL25A1-201ENST00000399126 ABCC3O15438 1527 aa21.21■□□□□ 0.99
COL25A1-201ENST00000399126 WASHC2CQ9Y4E1 1318 aa21.21■□□□□ 0.99
COL25A1-201ENST00000399126 NPATQ14207 1427 aa21.2■□□□□ 0.98
COL25A1-201ENST00000399126 CENPBP07199 599 aaPredicted RBP21.2■□□□□ 0.98
COL25A1-201ENST00000399126 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
COL25A1-201ENST00000399126 KLHL34Q8N239 644 aa21.2■□□□□ 0.98
COL25A1-201ENST00000399126 ROCK2O75116 1388 aaKnown RBP21.18■□□□□ 0.98
COL25A1-201ENST00000399126 CCDC7Q96M83 1385 aa21.17■□□□□ 0.98
COL25A1-201ENST00000399126 CAMSAP1Q5T5Y3 1602 aa21.16■□□□□ 0.98
COL25A1-201ENST00000399126 KIF7Q2M1P5 1343 aa21.15■□□□□ 0.98
COL25A1-201ENST00000399126 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
COL25A1-201ENST00000399126 POLR1AO95602 1720 aaPredicted RBP21.14■□□□□ 0.97
COL25A1-201ENST00000399126 MROH2AA6NES4 1674 aa21.13■□□□□ 0.97
COL25A1-201ENST00000399126 KIF1BO60333 1816 aa21.13■□□□□ 0.97
COL25A1-201ENST00000399126 ST20-MTHFSA0A0A6YYL1 179 aa21.12■□□□□ 0.97
COL25A1-201ENST00000399126 MADDQ8WXG6 1647 aa21.12■□□□□ 0.97
COL25A1-201ENST00000399126 POLR3GLQ9BT43 218 aa21.09■□□□□ 0.97
COL25A1-201ENST00000399126 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
COL25A1-201ENST00000399126 CHGAP10645 457 aaKnown RBP21.07■□□□□ 0.96
COL25A1-201ENST00000399126 ANP32CO43423 234 aa21.07■□□□□ 0.96
COL25A1-201ENST00000399126 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
COL25A1-201ENST00000399126 ZC3H13Q5T200 1668 aaKnown RBP21.06■□□□□ 0.96
COL25A1-201ENST00000399126 SYNMO15061 1565 aa21.06■□□□□ 0.96
COL25A1-201ENST00000399126 GTF3C3Q9Y5Q9 886 aa21.05■□□□□ 0.96
COL25A1-201ENST00000399126 NOS1P29475 1434 aa21.05■□□□□ 0.96
COL25A1-201ENST00000399126 ADGRB3O60242 1522 aa21.04■□□□□ 0.96
COL25A1-201ENST00000399126 ARHGEF40Q8TER5 1519 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms