RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 KDM5CP41229 1560 aa29.21■■■□□ 2.27
NFIX-203ENST00000397661 CCDC144AA2RUR9 1427 aa29.2■■■□□ 2.27
NFIX-203ENST00000397661 NUP160Q12769 1436 aa29.2■■■□□ 2.26
NFIX-203ENST00000397661 PANK3Q9H999 370 aa29.2■■■□□ 2.26
NFIX-203ENST00000397661 ABCC10Q5T3U5 1492 aa29.19■■■□□ 2.26
NFIX-203ENST00000397661 ADGBQ8N7X0 1667 aa29.19■■■□□ 2.26
NFIX-203ENST00000397661 RALGAPBQ86X10 1494 aa29.17■■■□□ 2.26
NFIX-203ENST00000397661 SKAP1Q86WV1 359 aa29.17■■■□□ 2.26
NFIX-203ENST00000397661 RALBP1Q15311 655 aa29.16■■■□□ 2.26
NFIX-203ENST00000397661 CDC42BPAQ5VT25 1732 aa29.16■■■□□ 2.26
NFIX-203ENST00000397661 RCAN3Q9UKA8 241 aa29.14■■■□□ 2.26
NFIX-203ENST00000397661 ARID4BQ4LE39 1312 aaPredicted RBP29.14■■■□□ 2.26
NFIX-203ENST00000397661 KTN1Q86UP2 1357 aaKnown RBP29.12■■■□□ 2.25
NFIX-203ENST00000397661 NLRP13Q86W25 1043 aa29.12■■■□□ 2.25
NFIX-203ENST00000397661 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
NFIX-203ENST00000397661 RRP1P56182 461 aaKnown RBP29.09■■■□□ 2.25
NFIX-203ENST00000397661 DISP3Q9P2K9 1392 aa29.08■■■□□ 2.25
NFIX-203ENST00000397661 CROCC2H7BZ55 1655 aa29.08■■■□□ 2.25
NFIX-203ENST00000397661 ABCA8O94911 1581 aa29.08■■■□□ 2.24
NFIX-203ENST00000397661 PLEKHH2Q8IVE3 1493 aa29.06■■■□□ 2.24
NFIX-203ENST00000397661 BRD4O60885 1362 aaPredicted RBP29.06■■■□□ 2.24
NFIX-203ENST00000397661 ARHGAP5Q13017 1502 aa29.06■■■□□ 2.24
NFIX-203ENST00000397661 FAM135AQ9P2D6 1515 aa29.06■■■□□ 2.24
NFIX-203ENST00000397661 CCDC141Q6ZP82 1450 aa29.05■■■□□ 2.24
NFIX-203ENST00000397661 RTN4Q9NQC3 1192 aaKnown RBP29.05■■■□□ 2.24
NFIX-203ENST00000397661 PER1O15534 1290 aaPredicted RBP29.04■■■□□ 2.24
NFIX-203ENST00000397661 ANP32AP39687 249 aaKnown RBP29.04■■■□□ 2.24
NFIX-203ENST00000397661 ADCY10Q96PN6 1610 aa29.04■■■□□ 2.24
NFIX-203ENST00000397661 POLR1AO95602 1720 aaPredicted RBP29.03■■■□□ 2.24
NFIX-203ENST00000397661 SYCP2Q9BX26 1530 aa29.03■■■□□ 2.24
NFIX-203ENST00000397661 AFAP1Q8N556 730 aa29.02■■■□□ 2.24
NFIX-203ENST00000397661 PRAG1Q86YV5 1406 aa29.01■■■□□ 2.23
NFIX-203ENST00000397661 RNF123Q5XPI4 1314 aa29.01■■■□□ 2.23
NFIX-203ENST00000397661 TESK2Q96S53 571 aa29.01■■■□□ 2.23
NFIX-203ENST00000397661 TMF1P82094 1093 aa29■■■□□ 2.23
NFIX-203ENST00000397661 ZBTB47Q9UFB7 747 aaPredicted RBP28.99■■■□□ 2.23
NFIX-203ENST00000397661 SHANK2Q9UPX8 1470 aa28.99■■■□□ 2.23
NFIX-203ENST00000397661 LRPPRCP42704 1394 aaKnown RBP28.98■■■□□ 2.23
NFIX-203ENST00000397661 SAMD9LQ8IVG5 1584 aa28.98■■■□□ 2.23
NFIX-203ENST00000397661 PLA2R1Q13018 1463 aa28.97■■■□□ 2.23
NFIX-203ENST00000397661 RSPH4AQ5TD94 716 aa28.97■■■□□ 2.23
NFIX-203ENST00000397661 SENP3Q9H4L4 574 aaPredicted RBP28.96■■■□□ 2.23
NFIX-203ENST00000397661 ADAMTS8Q9UP79 889 aa28.96■■■□□ 2.23
NFIX-203ENST00000397661 RTL5Q5HYW3 569 aaPredicted RBP28.96■■■□□ 2.23
NFIX-203ENST00000397661 IPO9Q96P70 1041 aaKnown RBP28.95■■■□□ 2.22
NFIX-203ENST00000397661 LAS1LQ9Y4W2 734 aaKnown RBP28.94■■■□□ 2.22
NFIX-203ENST00000397661 ARHGEF12Q9NZN5 1544 aa28.94■■■□□ 2.22
NFIX-203ENST00000397661 A2MP01023 1474 aa28.93■■■□□ 2.22
NFIX-203ENST00000397661 KNSTRNQ9Y448 316 aa28.92■■■□□ 2.22
NFIX-203ENST00000397661 CRBNQ96SW2 442 aa28.91■■■□□ 2.22
NFIX-203ENST00000397661 C20orf194Q5TEA3 1177 aa28.9■■■□□ 2.22
NFIX-203ENST00000397661 CCDC146Q8IYE0 955 aa28.9■■■□□ 2.22
NFIX-203ENST00000397661 PARD3Q8TEW0 1356 aa28.9■■■□□ 2.22
NFIX-203ENST00000397661 KDM5DQ9BY66 1539 aa28.88■■■□□ 2.21
NFIX-203ENST00000397661 EFCAB2Q5VUJ9 269 aa28.87■■■□□ 2.21
NFIX-203ENST00000397661 ERBINQ96RT1 1412 aa28.87■■■□□ 2.21
NFIX-203ENST00000397661 CDC42BPBQ9Y5S2 1711 aa28.87■■■□□ 2.21
NFIX-203ENST00000397661 WDR43Q15061 677 aaKnown RBP eCLIP28.86■■■□□ 2.21
NFIX-203ENST00000397661 ERCC6L2Q5T890 1561 aa28.86■■■□□ 2.21
NFIX-203ENST00000397661 TTC37Q6PGP7 1564 aa28.85■■■□□ 2.21
NFIX-203ENST00000397661 CHGAP10645 457 aaKnown RBP28.83■■■□□ 2.21
NFIX-203ENST00000397661 SPAG9O60271 1321 aaKnown RBP28.81■■■□□ 2.2
NFIX-203ENST00000397661 PDE4AP27815 886 aa28.8■■■□□ 2.2
NFIX-203ENST00000397661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.8■■■□□ 2.22e-6■■■■□ 22.3
NFIX-203ENST00000397661 KIF3BO15066 747 aa28.79■■■□□ 2.2
NFIX-203ENST00000397661 ARHGEF5Q12774 1597 aa28.79■■■□□ 2.2
NFIX-203ENST00000397661 TNNT2P45379 298 aaPredicted RBP28.78■■■□□ 2.2
NFIX-203ENST00000397661 TRAPPC8Q9Y2L5 1435 aa28.78■■■□□ 2.2
NFIX-203ENST00000397661 PPP2R1AP30153 589 aa28.78■■■□□ 2.2
NFIX-203ENST00000397661 PDE3BQ13370 1112 aa28.77■■■□□ 2.2
NFIX-203ENST00000397661 IL27Q8NEV9 243 aa28.74■■■□□ 2.19
NFIX-203ENST00000397661 CFAP70Q5T0N1 1121 aa28.74■■■□□ 2.19
NFIX-203ENST00000397661 ANO8Q9HCE9 1232 aaPredicted RBP28.73■■■□□ 2.19
NFIX-203ENST00000397661 TRPM1Q7Z4N2 1603 aa28.73■■■□□ 2.19
NFIX-203ENST00000397661 COL17A1Q9UMD9 1497 aaPredicted RBP28.73■■■□□ 2.19
NFIX-203ENST00000397661 PREX2Q70Z35 1606 aa28.73■■■□□ 2.19
NFIX-203ENST00000397661 NEUROD2Q15784 382 aa28.7■■■□□ 2.18
NFIX-203ENST00000397661 GPRASP1Q5JY77 1395 aa28.69■■■□□ 2.18
NFIX-203ENST00000397661 TCERG1O14776 1098 aaKnown RBP28.69■■■□□ 2.18
NFIX-203ENST00000397661 SLC4A3P48751 1232 aa28.69■■■□□ 2.18
NFIX-203ENST00000397661 APAF1O14727 1248 aa28.67■■■□□ 2.18
NFIX-203ENST00000397661 NEFMP07197 916 aa28.67■■■□□ 2.18
NFIX-203ENST00000397661 PLEKHH1Q9ULM0 1364 aa28.66■■■□□ 2.18
NFIX-203ENST00000397661 AMER1Q5JTC6 1135 aaPredicted RBP28.66■■■□□ 2.18
NFIX-203ENST00000397661 MAGI2Q86UL8 1455 aa28.66■■■□□ 2.18
NFIX-203ENST00000397661 RGS3P49796 1198 aa28.65■■■□□ 2.18
NFIX-203ENST00000397661 NUTM2DQ5VT03 806 aaPredicted RBP28.65■■■□□ 2.18
NFIX-203ENST00000397661 BACH2Q9BYV9 841 aa28.63■■■□□ 2.17
NFIX-203ENST00000397661 SPINK5Q9NQ38 1064 aaPredicted RBP28.63■■■□□ 2.17
NFIX-203ENST00000397661 CHD1O14646 1710 aa28.62■■■□□ 2.17
NFIX-203ENST00000397661 GOLGA2Q08379 1002 aa28.61■■■□□ 2.17
NFIX-203ENST00000397661 WASHC2CQ9Y4E1 1318 aa28.61■■■□□ 2.17
NFIX-203ENST00000397661 PLCH2O75038 1416 aa28.6■■■□□ 2.17
NFIX-203ENST00000397661 E9PCH4 1651 aa28.6■■■□□ 2.17
NFIX-203ENST00000397661 DUSP27Q5VZP5 1158 aa28.59■■■□□ 2.17
NFIX-203ENST00000397661 ADGRF5Q8IZF2 1346 aa28.59■■■□□ 2.17
NFIX-203ENST00000397661 BCAR3O75815 825 aa28.58■■■□□ 2.17
NFIX-203ENST00000397661 PRDM15P57071 1507 aaPredicted RBP28.57■■■□□ 2.16
NFIX-203ENST00000397661 DUOX2Q9NRD8 1548 aa28.57■■■□□ 2.16
NFIX-203ENST00000397661 TRAK1Q9UPV9 953 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms