RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PNISRQ8TF01 805 aaKnown RBP13.93□□□□□ -0.18
CPSF1P1-201ENST00000397477 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
CPSF1P1-201ENST00000397477 PLIN1O60240 522 aa13.92□□□□□ -0.18
CPSF1P1-201ENST00000397477 RALBP1Q15311 655 aa13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 SAFB2Q14151 953 aaKnown RBP eCLIP13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
CPSF1P1-201ENST00000397477 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
CPSF1P1-201ENST00000397477 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
CPSF1P1-201ENST00000397477 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
CPSF1P1-201ENST00000397477 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
CPSF1P1-201ENST00000397477 NBR1Q14596 966 aa13.87□□□□□ -0.19
CPSF1P1-201ENST00000397477 SPATA31E1Q6ZUB1 1445 aa13.87□□□□□ -0.19
CPSF1P1-201ENST00000397477 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
CPSF1P1-201ENST00000397477 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
CPSF1P1-201ENST00000397477 EXOC6Q8TAG9 804 aa13.86□□□□□ -0.19
CPSF1P1-201ENST00000397477 DHX29Q7Z478 1369 aaKnown RBP13.85□□□□□ -0.19
CPSF1P1-201ENST00000397477 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
CPSF1P1-201ENST00000397477 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
CPSF1P1-201ENST00000397477 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
CPSF1P1-201ENST00000397477 ABCC10Q5T3U5 1492 aa13.83□□□□□ -0.2
CPSF1P1-201ENST00000397477 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
CPSF1P1-201ENST00000397477 KANK1Q14678 1352 aa13.83□□□□□ -0.2
CPSF1P1-201ENST00000397477 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
CPSF1P1-201ENST00000397477 DISP3Q9P2K9 1392 aa13.82□□□□□ -0.2
CPSF1P1-201ENST00000397477 ADGRL2O95490 1459 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 STK26Q9P289 416 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 ARID4BQ4LE39 1312 aaPredicted RBP13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 ADAMTS8Q9UP79 889 aa13.81□□□□□ -0.2
CPSF1P1-201ENST00000397477 MBD5Q9P267 1494 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 ERCC6L2Q5T890 1561 aa13.8□□□□□ -0.2
CPSF1P1-201ENST00000397477 ABCA8O94911 1581 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 ERICH6BQ5W0A0 696 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
CPSF1P1-201ENST00000397477 SKAP1Q86WV1 359 aa13.78□□□□□ -0.2
CPSF1P1-201ENST00000397477 MSH5O43196 834 aa13.78□□□□□ -0.2
CPSF1P1-201ENST00000397477 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
CPSF1P1-201ENST00000397477 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
CPSF1P1-201ENST00000397477 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.21
CPSF1P1-201ENST00000397477 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
CPSF1P1-201ENST00000397477 TESK2Q96S53 571 aa13.76□□□□□ -0.21
CPSF1P1-201ENST00000397477 MLECQ14165 292 aa13.76□□□□□ -0.21
CPSF1P1-201ENST00000397477 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
CPSF1P1-201ENST00000397477 SMG6Q86US8 1419 aaKnown RBP13.74□□□□□ -0.21
CPSF1P1-201ENST00000397477 APAF1O14727 1248 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 CRBNQ96SW2 442 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 CDC42BPAQ5VT25 1732 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 RGS3P49796 1198 aa13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
CPSF1P1-201ENST00000397477 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 CYB5RLQ6IPT4 315 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
CPSF1P1-201ENST00000397477 PLCH2O75038 1416 aa13.71□□□□□ -0.21
CPSF1P1-201ENST00000397477 BCORL1Q5H9F3 1711 aa13.71□□□□□ -0.21
CPSF1P1-201ENST00000397477 A2MP01023 1474 aa13.71□□□□□ -0.21
CPSF1P1-201ENST00000397477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.71□□□□□ -0.22
CPSF1P1-201ENST00000397477 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
CPSF1P1-201ENST00000397477 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 PLA2R1Q13018 1463 aa13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 SLC12A5Q9H2X9 1139 aa13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 ARHGEF12Q9NZN5 1544 aa13.69□□□□□ -0.22
CPSF1P1-201ENST00000397477 NOP58Q9Y2X3 529 aaKnown RBP13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 C20orf194Q5TEA3 1177 aa13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 LAS1LQ9Y4W2 734 aaKnown RBP13.68□□□□□ -0.22
CPSF1P1-201ENST00000397477 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
CPSF1P1-201ENST00000397477 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
CPSF1P1-201ENST00000397477 ABCC2Q92887 1545 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 KDM5CP41229 1560 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 BCL2L13Q9BXK5 485 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 POGKQ9P215 609 aa13.66□□□□□ -0.22
CPSF1P1-201ENST00000397477 CHD1O14646 1710 aa13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 FANCAO15360 1455 aa13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 PAK3O75914 559 aaPredicted RBP13.65□□□□□ -0.22
CPSF1P1-201ENST00000397477 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
CPSF1P1-201ENST00000397477 ADGRL1O94910 1474 aa13.64□□□□□ -0.23
CPSF1P1-201ENST00000397477 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
CPSF1P1-201ENST00000397477 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms