RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 KIDINS220Q9ULH0 1771 aa19.37■□□□□ 0.69
CLIC1-209ENST00000395892 DIP2BQ9P265 1576 aa19.37■□□□□ 0.69
CLIC1-209ENST00000395892 FAM135AQ9P2D6 1515 aa19.36■□□□□ 0.69
CLIC1-209ENST00000395892 ZNF518AQ6AHZ1 1483 aa19.36■□□□□ 0.69
CLIC1-209ENST00000395892 POGZQ7Z3K3 1410 aa19.36■□□□□ 0.69
CLIC1-209ENST00000395892 FAM69CQ0P6D2 419 aa19.36■□□□□ 0.69
CLIC1-209ENST00000395892 KDM5CP41229 1560 aa19.36■□□□□ 0.69
CLIC1-209ENST00000395892 DHX29Q7Z478 1369 aaKnown RBP19.35■□□□□ 0.69
CLIC1-209ENST00000395892 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
CLIC1-209ENST00000395892 IQGAP3Q86VI3 1631 aa19.34■□□□□ 0.69
CLIC1-209ENST00000395892 L3MBTL2Q969R5 705 aa19.33■□□□□ 0.68
CLIC1-209ENST00000395892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.682e-10■□□□□ 10.7
CLIC1-209ENST00000395892 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
CLIC1-209ENST00000395892 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
CLIC1-209ENST00000395892 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
CLIC1-209ENST00000395892 RAPGEF3O95398 923 aa19.28■□□□□ 0.68
CLIC1-209ENST00000395892 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
CLIC1-209ENST00000395892 RICTORQ6R327 1708 aa19.27■□□□□ 0.68
CLIC1-209ENST00000395892 VWDEQ8N2E2 1590 aa19.27■□□□□ 0.67
CLIC1-209ENST00000395892 EIF2AK4Q9P2K8 1649 aaKnown RBP19.26■□□□□ 0.67
CLIC1-209ENST00000395892 DIEXFQ68CQ4 756 aaKnown RBP19.26■□□□□ 0.67
CLIC1-209ENST00000395892 HECW2Q9P2P5 1572 aa19.25■□□□□ 0.67
CLIC1-209ENST00000395892 A2MP01023 1474 aa19.25■□□□□ 0.67
CLIC1-209ENST00000395892 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
CLIC1-209ENST00000395892 MYT1LQ9UL68 1186 aa19.24■□□□□ 0.67
CLIC1-209ENST00000395892 MROH1Q8NDA8 1641 aa19.24■□□□□ 0.67
CLIC1-209ENST00000395892 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
CLIC1-209ENST00000395892 ATP10AO60312 1499 aa19.23■□□□□ 0.67
CLIC1-209ENST00000395892 KIF3BO15066 747 aa19.23■□□□□ 0.67
CLIC1-209ENST00000395892 NBPF8Q3BBV2 869 aa19.22■□□□□ 0.67
CLIC1-209ENST00000395892 ABCA6Q8N139 1617 aa19.22■□□□□ 0.67
CLIC1-209ENST00000395892 TSPOAP1O95153 1857 aa19.2■□□□□ 0.66
CLIC1-209ENST00000395892 BCORL1Q5H9F3 1711 aa19.2■□□□□ 0.66
CLIC1-209ENST00000395892 PRDM15P57071 1507 aaPredicted RBP19.19■□□□□ 0.66
CLIC1-209ENST00000395892 DIP2CQ9Y2E4 1556 aa19.18■□□□□ 0.66
CLIC1-209ENST00000395892 RNF17Q9BXT8 1623 aaKnown RBP19.18■□□□□ 0.66
CLIC1-209ENST00000395892 E9PCH4 1651 aa19.17■□□□□ 0.66
CLIC1-209ENST00000395892 PTPRTO14522 1441 aa19.17■□□□□ 0.66
CLIC1-209ENST00000395892 ZMYM4Q5VZL5 1548 aa19.16■□□□□ 0.66
CLIC1-209ENST00000395892 TET3O43151 1660 aa19.16■□□□□ 0.66
CLIC1-209ENST00000395892 KANK1Q14678 1352 aa19.15■□□□□ 0.66
CLIC1-209ENST00000395892 YEATS2Q9ULM3 1422 aa19.15■□□□□ 0.66
CLIC1-209ENST00000395892 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
CLIC1-209ENST00000395892 PPP4R3CPQ6ZMV5 832 aa19.14■□□□□ 0.65
CLIC1-209ENST00000395892 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
CLIC1-209ENST00000395892 COL17A1Q9UMD9 1497 aaPredicted RBP19.13■□□□□ 0.65
CLIC1-209ENST00000395892 CCDC144AA2RUR9 1427 aa19.11■□□□□ 0.65
CLIC1-209ENST00000395892 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
CLIC1-209ENST00000395892 TRPM2O94759 1503 aa19.07■□□□□ 0.64
CLIC1-209ENST00000395892 SPHKAPQ2M3C7 1700 aa19.06■□□□□ 0.64
CLIC1-209ENST00000395892 HSPA5P11021 654 aaKnown RBP19.06■□□□□ 0.64
CLIC1-209ENST00000395892 GGT6Q6P531 493 aa19.06■□□□□ 0.64
CLIC1-209ENST00000395892 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
CLIC1-209ENST00000395892 CEP152O94986 1710 aa19.05■□□□□ 0.64
CLIC1-209ENST00000395892 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
CLIC1-209ENST00000395892 DCAF11Q8TEB1 546 aa19.04■□□□□ 0.64
CLIC1-209ENST00000395892 REREQ9P2R6 1566 aa19.03■□□□□ 0.64
CLIC1-209ENST00000395892 ABCC3O15438 1527 aa19.03■□□□□ 0.64
CLIC1-209ENST00000395892 CLTCL1P53675 1640 aa19.03■□□□□ 0.64
CLIC1-209ENST00000395892 EIF4G2P78344 907 aaKnown RBP eCLIP19.02■□□□□ 0.641e-7■■■■■ 36.9
CLIC1-209ENST00000395892 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
CLIC1-209ENST00000395892 MIER1Q8N108 512 aa19.01■□□□□ 0.63
CLIC1-209ENST00000395892 KDM2AQ9Y2K7 1162 aa19.01■□□□□ 0.63
CLIC1-209ENST00000395892 AGLP35573 1532 aa19■□□□□ 0.63
CLIC1-209ENST00000395892 NPATQ14207 1427 aa19■□□□□ 0.63
CLIC1-209ENST00000395892 RALGAPBQ86X10 1494 aa18.99■□□□□ 0.63
CLIC1-209ENST00000395892 PRAG1Q86YV5 1406 aa18.99■□□□□ 0.63
CLIC1-209ENST00000395892 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
CLIC1-209ENST00000395892 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
CLIC1-209ENST00000395892 ARHGAP31Q2M1Z3 1444 aa18.97■□□□□ 0.63
CLIC1-209ENST00000395892 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
CLIC1-209ENST00000395892 CAMSAP1Q5T5Y3 1602 aa18.96■□□□□ 0.63
CLIC1-209ENST00000395892 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
CLIC1-209ENST00000395892 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
CLIC1-209ENST00000395892 NOS1P29475 1434 aa18.94■□□□□ 0.62
CLIC1-209ENST00000395892 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
CLIC1-209ENST00000395892 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
CLIC1-209ENST00000395892 ZC3H13Q5T200 1668 aaKnown RBP18.93■□□□□ 0.62
CLIC1-209ENST00000395892 STAC3Q96MF2 364 aa18.93■□□□□ 0.62
CLIC1-209ENST00000395892 TRPM1Q7Z4N2 1603 aa18.92■□□□□ 0.62
CLIC1-209ENST00000395892 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
CLIC1-209ENST00000395892 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
CLIC1-209ENST00000395892 ARHGEF40Q8TER5 1519 aa18.91■□□□□ 0.62
CLIC1-209ENST00000395892 WASHC2AQ641Q2 1341 aa18.91■□□□□ 0.62
CLIC1-209ENST00000395892 NBPF1Q3BBV0 1214 aa18.9■□□□□ 0.62
CLIC1-209ENST00000395892 GPRASP1Q5JY77 1395 aa18.9■□□□□ 0.62
CLIC1-209ENST00000395892 KIF1BO60333 1816 aa18.89■□□□□ 0.61
CLIC1-209ENST00000395892 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
CLIC1-209ENST00000395892 USP47Q96K76 1375 aa18.88■□□□□ 0.61
CLIC1-209ENST00000395892 SYNMO15061 1565 aa18.87■□□□□ 0.61
CLIC1-209ENST00000395892 PIK3C2BO00750 1634 aa18.86■□□□□ 0.61
CLIC1-209ENST00000395892 LAMC1P11047 1609 aa18.85■□□□□ 0.61
CLIC1-209ENST00000395892 MADDQ8WXG6 1647 aa18.85■□□□□ 0.61
CLIC1-209ENST00000395892 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
CLIC1-209ENST00000395892 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
CLIC1-209ENST00000395892 ADGRB3O60242 1522 aa18.84■□□□□ 0.61
CLIC1-209ENST00000395892 IFT172Q9UG01 1749 aa18.83■□□□□ 0.61
CLIC1-209ENST00000395892 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.61
CLIC1-209ENST00000395892 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
CLIC1-209ENST00000395892 MYOM2P54296 1465 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms