RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
RAE1-202ENST00000395840 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
RAE1-202ENST00000395840 AGLP35573 1532 aa12.8□□□□□ -0.36
RAE1-202ENST00000395840 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
RAE1-202ENST00000395840 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
RAE1-202ENST00000395840 UBE2Q2Q8WVN8 375 aa12.79□□□□□ -0.36
RAE1-202ENST00000395840 A2MP01023 1474 aa12.79□□□□□ -0.36
RAE1-202ENST00000395840 ARID4BQ4LE39 1312 aaPredicted RBP12.78□□□□□ -0.36
RAE1-202ENST00000395840 ADGRL2O95490 1459 aa12.78□□□□□ -0.36
RAE1-202ENST00000395840 ROCK1Q13464 1354 aa12.77□□□□□ -0.36
RAE1-202ENST00000395840 DHX29Q7Z478 1369 aaKnown RBP12.77□□□□□ -0.36
RAE1-202ENST00000395840 DUOX2Q9NRD8 1548 aa12.77□□□□□ -0.37
RAE1-202ENST00000395840 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
RAE1-202ENST00000395840 ITGAEP38570 1179 aa12.75□□□□□ -0.37
RAE1-202ENST00000395840 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
RAE1-202ENST00000395840 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
RAE1-202ENST00000395840 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
RAE1-202ENST00000395840 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
RAE1-202ENST00000395840 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
RAE1-202ENST00000395840 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
RAE1-202ENST00000395840 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
RAE1-202ENST00000395840 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
RAE1-202ENST00000395840 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
RAE1-202ENST00000395840 CNTLNQ9NXG0 1405 aa12.7□□□□□ -0.38
RAE1-202ENST00000395840 RRP7BPQ9NSQ0 103 aa12.7□□□□□ -0.38
RAE1-202ENST00000395840 CHIC2Q9UKJ5 165 aa12.7□□□□□ -0.38
RAE1-202ENST00000395840 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
RAE1-202ENST00000395840 KIF3BO15066 747 aa12.68□□□□□ -0.38
RAE1-202ENST00000395840 NEFLP07196 543 aa12.68□□□□□ -0.38
RAE1-202ENST00000395840 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
RAE1-202ENST00000395840 RNF17Q9BXT8 1623 aaKnown RBP12.67□□□□□ -0.38
RAE1-202ENST00000395840 ANKRD50Q9ULJ7 1429 aa12.67□□□□□ -0.38
RAE1-202ENST00000395840 SIGLEC1Q9BZZ2 1709 aa12.67□□□□□ -0.38
RAE1-202ENST00000395840 KANK1Q14678 1352 aa12.67□□□□□ -0.38
RAE1-202ENST00000395840 FER1L4A9Z1Z3 1794 aa12.65□□□□□ -0.38
RAE1-202ENST00000395840 MLECQ14165 292 aa12.65□□□□□ -0.38
RAE1-202ENST00000395840 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
RAE1-202ENST00000395840 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
RAE1-202ENST00000395840 GGT6Q6P531 493 aa12.64□□□□□ -0.39
RAE1-202ENST00000395840 HFM1A2PYH4 1435 aa12.64□□□□□ -0.39
RAE1-202ENST00000395840 MROH2AA6NES4 1674 aa12.64□□□□□ -0.39
RAE1-202ENST00000395840 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
RAE1-202ENST00000395840 MADDQ8WXG6 1647 aa12.64□□□□□ -0.39
RAE1-202ENST00000395840 GCC2Q8IWJ2 1684 aa12.63□□□□□ -0.39
RAE1-202ENST00000395840 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
RAE1-202ENST00000395840 KDM5DQ9BY66 1539 aa12.63□□□□□ -0.39
RAE1-202ENST00000395840 PRDM15P57071 1507 aaPredicted RBP12.62□□□□□ -0.39
RAE1-202ENST00000395840 WASHC2CQ9Y4E1 1318 aa12.61□□□□□ -0.39
RAE1-202ENST00000395840 RIMS1Q86UR5 1692 aaKnown RBP12.61□□□□□ -0.39
RAE1-202ENST00000395840 NAIPQ13075 1403 aa12.61□□□□□ -0.39
RAE1-202ENST00000395840 PTPRMP28827 1452 aa12.6□□□□□ -0.39
RAE1-202ENST00000395840 UNC13BO14795 1591 aa12.59□□□□□ -0.39
RAE1-202ENST00000395840 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
RAE1-202ENST00000395840 NBR1Q14596 966 aa12.58□□□□□ -0.39
RAE1-202ENST00000395840 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.39
RAE1-202ENST00000395840 LMTK2Q8IWU2 1503 aa12.58□□□□□ -0.39
RAE1-202ENST00000395840 CLTCQ00610 1675 aaKnown RBP12.58□□□□□ -0.4
RAE1-202ENST00000395840 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
RAE1-202ENST00000395840 ZMYM3Q14202 1370 aa12.57□□□□□ -0.4
RAE1-202ENST00000395840 NPATQ14207 1427 aa12.57□□□□□ -0.4
RAE1-202ENST00000395840 ABCC3O15438 1527 aa12.57□□□□□ -0.4
RAE1-202ENST00000395840 VWDEQ8N2E2 1590 aa12.57□□□□□ -0.4
RAE1-202ENST00000395840 SETD5Q9C0A6 1442 aa12.57□□□□□ -0.4
RAE1-202ENST00000395840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.41e-6■□□□□ 9.2
RAE1-202ENST00000395840 ARHGAP31Q2M1Z3 1444 aa12.56□□□□□ -0.4
RAE1-202ENST00000395840 PZPP20742 1482 aa12.55□□□□□ -0.4
RAE1-202ENST00000395840 C3P01024 1663 aa12.55□□□□□ -0.4
RAE1-202ENST00000395840 SLC24A1O60721 1099 aa12.55□□□□□ -0.4
RAE1-202ENST00000395840 IQGAP3Q86VI3 1631 aa12.55□□□□□ -0.4
RAE1-202ENST00000395840 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
RAE1-202ENST00000395840 NUP155O75694 1391 aa12.54□□□□□ -0.4
RAE1-202ENST00000395840 CAMSAP1Q5T5Y3 1602 aa12.54□□□□□ -0.4
RAE1-202ENST00000395840 RPRD2Q5VT52 1461 aaKnown RBP12.54□□□□□ -0.4
RAE1-202ENST00000395840 TET3O43151 1660 aa12.53□□□□□ -0.4
RAE1-202ENST00000395840 CEP152O94986 1710 aa12.52□□□□□ -0.4
RAE1-202ENST00000395840 SETD1BQ9UPS6 1966 aaKnown RBP12.51□□□□□ -0.41
RAE1-202ENST00000395840 EFCAB6Q5THR3 1501 aa12.51□□□□□ -0.41
RAE1-202ENST00000395840 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
RAE1-202ENST00000395840 PREX1Q8TCU6 1659 aa12.49□□□□□ -0.41
RAE1-202ENST00000395840 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
RAE1-202ENST00000395840 UHRF1BP1Q6BDS2 1440 aa12.48□□□□□ -0.41
RAE1-202ENST00000395840 TNRQ92752 1358 aa12.48□□□□□ -0.41
RAE1-202ENST00000395840 RAB3GAP2Q9H2M9 1393 aa12.48□□□□□ -0.41
RAE1-202ENST00000395840 SPATA31D1Q6ZQQ2 1576 aa12.48□□□□□ -0.41
RAE1-202ENST00000395840 NLRP1Q9C000 1473 aa12.48□□□□□ -0.41
RAE1-202ENST00000395840 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
RAE1-202ENST00000395840 NOP58Q9Y2X3 529 aaKnown RBP12.48□□□□□ -0.41
RAE1-202ENST00000395840 ERVK-7P63135 1459 aa12.47□□□□□ -0.41
RAE1-202ENST00000395840 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.42
RAE1-202ENST00000395840 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
RAE1-202ENST00000395840 SLC52A1Q9NWF4 448 aa12.45□□□□□ -0.42
RAE1-202ENST00000395840 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
RAE1-202ENST00000395840 NOS1P29475 1434 aa12.44□□□□□ -0.42
RAE1-202ENST00000395840 E9PCH4 1651 aa12.43□□□□□ -0.42
RAE1-202ENST00000395840 ZNF142P52746 1687 aaPredicted RBP12.43□□□□□ -0.42
RAE1-202ENST00000395840 A2ML1A8K2U0 1454 aa12.43□□□□□ -0.42
RAE1-202ENST00000395840 MYO3AQ8NEV4 1616 aa12.43□□□□□ -0.42
RAE1-202ENST00000395840 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
RAE1-202ENST00000395840 FBXO31Q5XUX0 539 aaPredicted RBP12.42□□□□□ -0.42
RAE1-202ENST00000395840 MPHOSPH9Q99550 1183 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms