RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 BCL11AQ9H165 835 aa21.38■■□□□ 1.01
SMARCD1-202ENST00000394963 CFAP70Q5T0N1 1121 aa21.38■■□□□ 1.01
SMARCD1-202ENST00000394963 CCDC141Q6ZP82 1450 aa21.36■■□□□ 1.01
SMARCD1-202ENST00000394963 WDR43Q15061 677 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMARCD1-202ENST00000394963 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
SMARCD1-202ENST00000394963 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
SMARCD1-202ENST00000394963 ERICH6Q7L0X2 663 aa21.32■■□□□ 1
SMARCD1-202ENST00000394963 RPRD2Q5VT52 1461 aaKnown RBP21.32■■□□□ 1
SMARCD1-202ENST00000394963 PPM1GO15355 546 aaPredicted RBP21.32■■□□□ 1
SMARCD1-202ENST00000394963 CHD1O14646 1710 aa21.29■■□□□ 1
SMARCD1-202ENST00000394963 CNTLNQ9NXG0 1405 aa21.27■■□□□ 1
SMARCD1-202ENST00000394963 POGKQ9P215 609 aa21.26■□□□□ 0.99
SMARCD1-202ENST00000394963 PZPP20742 1482 aa21.26■□□□□ 0.99
SMARCD1-202ENST00000394963 NUTM2FA1L443 756 aa21.26■□□□□ 0.99
SMARCD1-202ENST00000394963 CCDC146Q8IYE0 955 aa21.25■□□□□ 0.99
SMARCD1-202ENST00000394963 SRPK2P78362 688 aaKnown RBP21.25■□□□□ 0.99
SMARCD1-202ENST00000394963 CCDC136Q96JN2 1154 aa21.25■□□□□ 0.99
SMARCD1-202ENST00000394963 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
SMARCD1-202ENST00000394963 SOX12O15370 315 aa21.2■□□□□ 0.99
SMARCD1-202ENST00000394963 KTN1Q86UP2 1357 aaKnown RBP21.2■□□□□ 0.98
SMARCD1-202ENST00000394963 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
SMARCD1-202ENST00000394963 FANCAO15360 1455 aa21.19■□□□□ 0.98
SMARCD1-202ENST00000394963 ASXL2Q76L83 1435 aa21.19■□□□□ 0.98
SMARCD1-202ENST00000394963 ADGRL1O94910 1474 aa21.18■□□□□ 0.98
SMARCD1-202ENST00000394963 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
SMARCD1-202ENST00000394963 PLCH2O75038 1416 aa21.17■□□□□ 0.98
SMARCD1-202ENST00000394963 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
SMARCD1-202ENST00000394963 ABCA8O94911 1581 aa21.17■□□□□ 0.98
SMARCD1-202ENST00000394963 NPM2Q86SE8 214 aaKnown RBP21.16■□□□□ 0.98
SMARCD1-202ENST00000394963 ABCC10Q5T3U5 1492 aa21.16■□□□□ 0.98
SMARCD1-202ENST00000394963 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
SMARCD1-202ENST00000394963 ADGRF5Q8IZF2 1346 aa21.14■□□□□ 0.98
SMARCD1-202ENST00000394963 MINK1Q8N4C8 1332 aaPredicted RBP21.13■□□□□ 0.97
SMARCD1-202ENST00000394963 ITSN2Q9NZM3 1697 aa21.13■□□□□ 0.97
SMARCD1-202ENST00000394963 FBXO31Q5XUX0 539 aaPredicted RBP21.13■□□□□ 0.97
SMARCD1-202ENST00000394963 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
SMARCD1-202ENST00000394963 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
SMARCD1-202ENST00000394963 NLRP13Q86W25 1043 aa21.12■□□□□ 0.97
SMARCD1-202ENST00000394963 MBD5Q9P267 1494 aa21.12■□□□□ 0.97
SMARCD1-202ENST00000394963 PLIN1O60240 522 aa21.12■□□□□ 0.97
SMARCD1-202ENST00000394963 U2SURPO15042 1029 aaKnown RBP21.11■□□□□ 0.97
SMARCD1-202ENST00000394963 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
SMARCD1-202ENST00000394963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMARCD1-202ENST00000394963 RALBP1Q15311 655 aa21.1■□□□□ 0.97
SMARCD1-202ENST00000394963 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
SMARCD1-202ENST00000394963 CFAP65Q6ZU64 1925 aaKnown RBP21.1■□□□□ 0.97
SMARCD1-202ENST00000394963 CDCA7LQ96GN5 454 aa21.1■□□□□ 0.97
SMARCD1-202ENST00000394963 MYBBP1AQ9BQG0 1328 aaKnown RBP21.09■□□□□ 0.97
SMARCD1-202ENST00000394963 SLC12A5Q9H2X9 1139 aa21.08■□□□□ 0.97
SMARCD1-202ENST00000394963 CABP2Q9NPB3 220 aa21.08■□□□□ 0.96
SMARCD1-202ENST00000394963 TTC37Q6PGP7 1564 aa21.08■□□□□ 0.96
SMARCD1-202ENST00000394963 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
SMARCD1-202ENST00000394963 TEX14Q8IWB6 1497 aa21.05■□□□□ 0.96
SMARCD1-202ENST00000394963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMARCD1-202ENST00000394963 TSHZ2Q9NRE2 1034 aa21.05■□□□□ 0.96
SMARCD1-202ENST00000394963 WDR7Q9Y4E6 1490 aa21.04■□□□□ 0.96
SMARCD1-202ENST00000394963 DISP3Q9P2K9 1392 aa21.04■□□□□ 0.96
SMARCD1-202ENST00000394963 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
SMARCD1-202ENST00000394963 SAMD9LQ8IVG5 1584 aa21.02■□□□□ 0.96
SMARCD1-202ENST00000394963 ERBINQ96RT1 1412 aa21.02■□□□□ 0.96
SMARCD1-202ENST00000394963 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
SMARCD1-202ENST00000394963 ADAMTS8Q9UP79 889 aa21.02■□□□□ 0.96
SMARCD1-202ENST00000394963 ZBTB7CA1YPR0 619 aa21.02■□□□□ 0.96
SMARCD1-202ENST00000394963 C14orf37Q86TY3 774 aa21.01■□□□□ 0.95
SMARCD1-202ENST00000394963 GCC2Q8IWJ2 1684 aa21.01■□□□□ 0.95
SMARCD1-202ENST00000394963 IDI1Q13907 227 aa21.01■□□□□ 0.95
SMARCD1-202ENST00000394963 PPP4R2Q9NY27 417 aa21■□□□□ 0.95
SMARCD1-202ENST00000394963 NUDCQ9Y266 331 aa21■□□□□ 0.95
SMARCD1-202ENST00000394963 ZBED9Q6R2W3 1325 aa21■□□□□ 0.95
SMARCD1-202ENST00000394963 FRAT1Q92837 279 aaPredicted RBP21■□□□□ 0.95
SMARCD1-202ENST00000394963 CDC42BPAQ5VT25 1732 aa20.99■□□□□ 0.95
SMARCD1-202ENST00000394963 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
SMARCD1-202ENST00000394963 LAS1LQ9Y4W2 734 aaKnown RBP20.98■□□□□ 0.95
SMARCD1-202ENST00000394963 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
SMARCD1-202ENST00000394963 ADGRL2O95490 1459 aa20.97■□□□□ 0.95
SMARCD1-202ENST00000394963 APAF1O14727 1248 aa20.97■□□□□ 0.95
SMARCD1-202ENST00000394963 RCAN3Q9UKA8 241 aa20.97■□□□□ 0.95
SMARCD1-202ENST00000394963 U2AF1L5P0DN76 240 aaPredicted RBP20.97■□□□□ 0.95
SMARCD1-202ENST00000394963 U2AF1Q01081 240 aaKnown RBP eCLIP20.97■□□□□ 0.95
SMARCD1-202ENST00000394963 DHX29Q7Z478 1369 aaKnown RBP20.95■□□□□ 0.94
SMARCD1-202ENST00000394963 GGNBP2Q9H3C7 697 aa20.95■□□□□ 0.94
SMARCD1-202ENST00000394963 TESK2Q96S53 571 aa20.94■□□□□ 0.94
SMARCD1-202ENST00000394963 CEBPAP49715 358 aaPredicted RBP20.93■□□□□ 0.94
SMARCD1-202ENST00000394963 EIF3AQ14152 1382 aaKnown RBP20.93■□□□□ 0.94
SMARCD1-202ENST00000394963 NEFMP07197 916 aa20.92■□□□□ 0.94
SMARCD1-202ENST00000394963 BCL2L13Q9BXK5 485 aa20.91■□□□□ 0.94
SMARCD1-202ENST00000394963 RBM19Q9Y4C8 960 aaKnown RBP20.91■□□□□ 0.94
SMARCD1-202ENST00000394963 PRAG1Q86YV5 1406 aa20.91■□□□□ 0.94
SMARCD1-202ENST00000394963 PRAM1Q96QH2 718 aa20.91■□□□□ 0.94
SMARCD1-202ENST00000394963 PPP2R1AP30153 589 aa20.9■□□□□ 0.94
SMARCD1-202ENST00000394963 KDM5BQ9UGL1 1544 aa20.9■□□□□ 0.94
SMARCD1-202ENST00000394963 SHANK2Q9UPX8 1470 aa20.9■□□□□ 0.94
SMARCD1-202ENST00000394963 EXOC6Q8TAG9 804 aa20.9■□□□□ 0.94
SMARCD1-202ENST00000394963 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
SMARCD1-202ENST00000394963 WAPLQ7Z5K2 1190 aa20.88■□□□□ 0.93
SMARCD1-202ENST00000394963 A2MP01023 1474 aa20.88■□□□□ 0.93
SMARCD1-202ENST00000394963 FBLN1P23142 703 aa20.88■□□□□ 0.93
SMARCD1-202ENST00000394963 NOS1P29475 1434 aa20.88■□□□□ 0.93
SMARCD1-202ENST00000394963 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
SMARCD1-202ENST00000394963 ZCCHC11Q5TAX3 1644 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms