RNA–Protein interactions for RNA: ENST00000394805.7

MATR3-201, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-201ENST00000394805 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.577e-6■■□□□ 14
MATR3-201ENST00000394805 GPATCH8Q9UKJ3 1502 aaKnown RBP11.52□□□□□ -0.57
MATR3-201ENST00000394805 BACH2Q9BYV9 841 aa11.52□□□□□ -0.57
MATR3-201ENST00000394805 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
MATR3-201ENST00000394805 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
MATR3-201ENST00000394805 ADAMTS8Q9UP79 889 aa11.51□□□□□ -0.57
MATR3-201ENST00000394805 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
MATR3-201ENST00000394805 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
MATR3-201ENST00000394805 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
MATR3-201ENST00000394805 C9orf84Q5VXU9 1444 aa11.49□□□□□ -0.57
MATR3-201ENST00000394805 KIAA0586Q9BVV6 1533 aa11.49□□□□□ -0.57
MATR3-201ENST00000394805 KNSTRNQ9Y448 316 aa11.49□□□□□ -0.57
MATR3-201ENST00000394805 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
MATR3-201ENST00000394805 TMF1P82094 1093 aa11.48□□□□□ -0.57
MATR3-201ENST00000394805 ADAMTS12P58397 1594 aa11.47□□□□□ -0.57
MATR3-201ENST00000394805 CCDC144AA2RUR9 1427 aa11.47□□□□□ -0.57
MATR3-201ENST00000394805 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
MATR3-201ENST00000394805 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
MATR3-201ENST00000394805 LRPPRCP42704 1394 aaKnown RBP11.47□□□□□ -0.57
MATR3-201ENST00000394805 KIF14Q15058 1648 aa11.47□□□□□ -0.57
MATR3-201ENST00000394805 NEUROD2Q15784 382 aa11.47□□□□□ -0.57
MATR3-201ENST00000394805 RAPGEF6Q8TEU7 1601 aa11.46□□□□□ -0.57
MATR3-201ENST00000394805 SENP3Q9H4L4 574 aaPredicted RBP11.46□□□□□ -0.57
MATR3-201ENST00000394805 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.58
MATR3-201ENST00000394805 KIAA0556O60303 1618 aa11.46□□□□□ -0.58
MATR3-201ENST00000394805 KDM5CP41229 1560 aa11.46□□□□□ -0.58
MATR3-201ENST00000394805 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
MATR3-201ENST00000394805 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
MATR3-201ENST00000394805 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
MATR3-201ENST00000394805 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
MATR3-201ENST00000394805 RALGAPBQ86X10 1494 aa11.45□□□□□ -0.58
MATR3-201ENST00000394805 CARMIL2Q6F5E8 1435 aa11.45□□□□□ -0.58
MATR3-201ENST00000394805 ARXQ96QS3 562 aa11.44□□□□□ -0.58
MATR3-201ENST00000394805 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
MATR3-201ENST00000394805 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
MATR3-201ENST00000394805 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
MATR3-201ENST00000394805 MS4A1P11836 297 aa11.43□□□□□ -0.58
MATR3-201ENST00000394805 DDRGK1Q96HY6 314 aa11.43□□□□□ -0.58
MATR3-201ENST00000394805 BRPF3Q9ULD4 1205 aa11.43□□□□□ -0.58
MATR3-201ENST00000394805 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
MATR3-201ENST00000394805 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
MATR3-201ENST00000394805 NFKBIBQ15653 356 aa11.41□□□□□ -0.58
MATR3-201ENST00000394805 PARD3Q8TEW0 1356 aa11.41□□□□□ -0.58
MATR3-201ENST00000394805 APAF1O14727 1248 aa11.41□□□□□ -0.58
MATR3-201ENST00000394805 FRAT1Q92837 279 aaPredicted RBP11.41□□□□□ -0.58
MATR3-201ENST00000394805 TESK2Q96S53 571 aa11.41□□□□□ -0.58
MATR3-201ENST00000394805 BCAR3O75815 825 aa11.4□□□□□ -0.58
MATR3-201ENST00000394805 PPP2R1AP30153 589 aa11.4□□□□□ -0.58
MATR3-201ENST00000394805 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
MATR3-201ENST00000394805 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
MATR3-201ENST00000394805 UHRF1BP1Q6BDS2 1440 aa11.39□□□□□ -0.59
MATR3-201ENST00000394805 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
MATR3-201ENST00000394805 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
MATR3-201ENST00000394805 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
MATR3-201ENST00000394805 RRP7AQ9Y3A4 280 aaKnown RBP11.38□□□□□ -0.59
MATR3-201ENST00000394805 POLR1AO95602 1720 aaPredicted RBP11.37□□□□□ -0.59
MATR3-201ENST00000394805 GSE1Q14687 1217 aa11.37□□□□□ -0.59
MATR3-201ENST00000394805 ERBINQ96RT1 1412 aa11.37□□□□□ -0.59
MATR3-201ENST00000394805 FRAT2O75474 233 aaPredicted RBP11.37□□□□□ -0.59
MATR3-201ENST00000394805 PRAG1Q86YV5 1406 aa11.37□□□□□ -0.59
MATR3-201ENST00000394805 ATP10BO94823 1461 aa11.37□□□□□ -0.59
MATR3-201ENST00000394805 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
MATR3-201ENST00000394805 DUSP27Q5VZP5 1158 aa11.37□□□□□ -0.59
MATR3-201ENST00000394805 CENPQQ7L2Z9 268 aaPredicted RBP11.37□□□□□ -0.59
MATR3-201ENST00000394805 SLKQ9H2G2 1235 aaPredicted RBP11.36□□□□□ -0.59
MATR3-201ENST00000394805 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
MATR3-201ENST00000394805 PLEKHH1Q9ULM0 1364 aa11.36□□□□□ -0.59
MATR3-201ENST00000394805 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
MATR3-201ENST00000394805 BCL2L13Q9BXK5 485 aa11.36□□□□□ -0.59
MATR3-201ENST00000394805 ADGRL2O95490 1459 aa11.36□□□□□ -0.59
MATR3-201ENST00000394805 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
MATR3-201ENST00000394805 PTPRGP23470 1445 aa11.35□□□□□ -0.59
MATR3-201ENST00000394805 COG6Q9Y2V7 657 aa11.35□□□□□ -0.59
MATR3-201ENST00000394805 ITSN2Q9NZM3 1697 aa11.34□□□□□ -0.59
MATR3-201ENST00000394805 PANK1Q8TE04 598 aa11.34□□□□□ -0.59
MATR3-201ENST00000394805 CLUAP1Q96AJ1 413 aa11.34□□□□□ -0.59
MATR3-201ENST00000394805 ADGBQ8N7X0 1667 aa11.33□□□□□ -0.59
MATR3-201ENST00000394805 FAM135AQ9P2D6 1515 aa11.33□□□□□ -0.6
MATR3-201ENST00000394805 PLEKHH2Q8IVE3 1493 aa11.33□□□□□ -0.6
MATR3-201ENST00000394805 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
MATR3-201ENST00000394805 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
MATR3-201ENST00000394805 C8orf34Q49A92 452 aa11.32□□□□□ -0.6
MATR3-201ENST00000394805 A2MP01023 1474 aa11.31□□□□□ -0.6
MATR3-201ENST00000394805 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
MATR3-201ENST00000394805 IGHDP01880 384 aa11.31□□□□□ -0.6
MATR3-201ENST00000394805 CEP170Q5SW79 1584 aa11.31□□□□□ -0.6
MATR3-201ENST00000394805 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
MATR3-201ENST00000394805 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
MATR3-201ENST00000394805 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
MATR3-201ENST00000394805 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
MATR3-201ENST00000394805 CCDC141Q6ZP82 1450 aa11.3□□□□□ -0.6
MATR3-201ENST00000394805 CFAP70Q5T0N1 1121 aa11.3□□□□□ -0.6
MATR3-201ENST00000394805 ARHGAP5Q13017 1502 aa11.3□□□□□ -0.6
MATR3-201ENST00000394805 KDM2BQ8NHM5 1336 aa11.3□□□□□ -0.6
MATR3-201ENST00000394805 CDCA8Q53HL2 280 aa11.29□□□□□ -0.6
MATR3-201ENST00000394805 RSPH4AQ5TD94 716 aa11.29□□□□□ -0.6
MATR3-201ENST00000394805 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
MATR3-201ENST00000394805 PLA2R1Q13018 1463 aa11.28□□□□□ -0.6
MATR3-201ENST00000394805 SEC24BO95487 1268 aa11.28□□□□□ -0.6
MATR3-201ENST00000394805 COL17A1Q9UMD9 1497 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms