RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 PLXNC1O60486 1568 aa33.15■■■□□ 2.9
RARA-203ENST00000394086 KIF15Q9NS87 1388 aa33.14■■■□□ 2.9
RARA-203ENST00000394086 BCORL1Q5H9F3 1711 aa33.14■■■□□ 2.9
RARA-203ENST00000394086 NCOA1Q15788 1441 aa33.11■■■□□ 2.89
RARA-203ENST00000394086 KIF3BO15066 747 aa33.1■■■□□ 2.89
RARA-203ENST00000394086 GGT6Q6P531 493 aa33.08■■■□□ 2.89
RARA-203ENST00000394086 ADGRL2O95490 1459 aa33.07■■■□□ 2.89
RARA-203ENST00000394086 ADAMTSL3P82987 1691 aa33.07■■■□□ 2.88
RARA-203ENST00000394086 DUOX2Q9NRD8 1548 aa33.06■■■□□ 2.88
RARA-203ENST00000394086 SUPT16HQ9Y5B9 1047 aaKnown RBP33.06■■■□□ 2.88
RARA-203ENST00000394086 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
RARA-203ENST00000394086 ROCK1Q13464 1354 aa33.01■■■□□ 2.87
RARA-203ENST00000394086 ESF1Q9H501 851 aaKnown RBP33.01■■■□□ 2.87
RARA-203ENST00000394086 TIMELESSQ9UNS1 1208 aa33■■■□□ 2.87
RARA-203ENST00000394086 RAB3GAP2Q9H2M9 1393 aa33■■■□□ 2.87
RARA-203ENST00000394086 AEBP2Q6ZN18 517 aaPredicted RBP32.99■■■□□ 2.87
RARA-203ENST00000394086 SETD5Q9C0A6 1442 aa32.98■■■□□ 2.87
RARA-203ENST00000394086 ERBINQ96RT1 1412 aa32.97■■■□□ 2.87
RARA-203ENST00000394086 FER1L4A9Z1Z3 1794 aa32.94■■■□□ 2.86
RARA-203ENST00000394086 PLPPR3Q6T4P5 718 aa32.94■■■□□ 2.86
RARA-203ENST00000394086 RIMS1Q86UR5 1692 aaKnown RBP32.94■■■□□ 2.86
RARA-203ENST00000394086 ANKRD50Q9ULJ7 1429 aa32.93■■■□□ 2.86
RARA-203ENST00000394086 PTPRMP28827 1452 aa32.92■■■□□ 2.86
RARA-203ENST00000394086 EIF2AK4Q9P2K8 1649 aaKnown RBP32.92■■■□□ 2.86
RARA-203ENST00000394086 PPP6R1Q9UPN7 881 aa32.91■■■□□ 2.86
RARA-203ENST00000394086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.87■■■□□ 2.859e-7■□□□□ 9.1
RARA-203ENST00000394086 WASHC2CQ9Y4E1 1318 aa32.86■■■□□ 2.85
RARA-203ENST00000394086 CEBPAP49715 358 aaPredicted RBP32.85■■■□□ 2.85
RARA-203ENST00000394086 CNTLNQ9NXG0 1405 aa32.85■■■□□ 2.85
RARA-203ENST00000394086 RNF17Q9BXT8 1623 aaKnown RBP32.84■■■□□ 2.85
RARA-203ENST00000394086 CLTCQ00610 1675 aaKnown RBP32.8■■■□□ 2.84
RARA-203ENST00000394086 ZMYM3Q14202 1370 aa32.79■■■□□ 2.84
RARA-203ENST00000394086 NAIPQ13075 1403 aa32.79■■■□□ 2.84
RARA-203ENST00000394086 MROH1Q8NDA8 1641 aa32.78■■■□□ 2.84
RARA-203ENST00000394086 KDM5DQ9BY66 1539 aa32.77■■■□□ 2.84
RARA-203ENST00000394086 HFM1A2PYH4 1435 aa32.76■■■□□ 2.84
RARA-203ENST00000394086 KANK1Q14678 1352 aa32.75■■■□□ 2.83
RARA-203ENST00000394086 PRDM15P57071 1507 aaPredicted RBP32.74■■■□□ 2.83
RARA-203ENST00000394086 DEPDC5O75140 1603 aa32.73■■■□□ 2.83
RARA-203ENST00000394086 FAM135AQ9P2D6 1515 aa32.72■■■□□ 2.83
RARA-203ENST00000394086 ABCC3O15438 1527 aa32.72■■■□□ 2.83
RARA-203ENST00000394086 MROH2AA6NES4 1674 aa32.71■■■□□ 2.83
RARA-203ENST00000394086 C3P01024 1663 aa32.7■■■□□ 2.83
RARA-203ENST00000394086 GCC2Q8IWJ2 1684 aa32.69■■■□□ 2.82
RARA-203ENST00000394086 ZC3H13Q5T200 1668 aaKnown RBP32.65■■■□□ 2.82
RARA-203ENST00000394086 CEP152O94986 1710 aa32.65■■■□□ 2.82
RARA-203ENST00000394086 NUP155O75694 1391 aa32.64■■■□□ 2.82
RARA-203ENST00000394086 ANP32EQ9BTT0 268 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 UNC13BO14795 1591 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 CCER2I3L3R5 266 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 FBXO31Q5XUX0 539 aaPredicted RBP32.63■■■□□ 2.81
RARA-203ENST00000394086 TSHZ2Q9NRE2 1034 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 VWDEQ8N2E2 1590 aa32.63■■■□□ 2.81
RARA-203ENST00000394086 PZPP20742 1482 aa32.59■■■□□ 2.81
RARA-203ENST00000394086 TRIM52Q96A61 297 aa32.59■■■□□ 2.81
RARA-203ENST00000394086 CAMSAP1Q5T5Y3 1602 aa32.58■■■□□ 2.81
RARA-203ENST00000394086 LMTK2Q8IWU2 1503 aa32.57■■■□□ 2.8
RARA-203ENST00000394086 NPATQ14207 1427 aa32.56■■■□□ 2.8
RARA-203ENST00000394086 PPP1R15AO75807 674 aaPredicted RBP32.55■■■□□ 2.8
RARA-203ENST00000394086 ARHGAP31Q2M1Z3 1444 aa32.52■■■□□ 2.8
RARA-203ENST00000394086 SETD1BQ9UPS6 1966 aaKnown RBP32.51■■■□□ 2.79
RARA-203ENST00000394086 IQGAP3Q86VI3 1631 aa32.51■■■□□ 2.79
RARA-203ENST00000394086 TNRQ92752 1358 aa32.48■■■□□ 2.79
RARA-203ENST00000394086 CFAP65Q6ZU64 1925 aaKnown RBP32.48■■■□□ 2.79
RARA-203ENST00000394086 EFCAB6Q5THR3 1501 aa32.48■■■□□ 2.79
RARA-203ENST00000394086 TET3O43151 1660 aa32.46■■■□□ 2.79
RARA-203ENST00000394086 UHRF1BP1Q6BDS2 1440 aa32.46■■■□□ 2.79
RARA-203ENST00000394086 ERVK-7P63135 1459 aa32.45■■■□□ 2.79
RARA-203ENST00000394086 DDX10Q13206 875 aaKnown RBP32.43■■■□□ 2.78
RARA-203ENST00000394086 PREX1Q8TCU6 1659 aa32.43■■■□□ 2.78
RARA-203ENST00000394086 LMTK3Q96Q04 1460 aa32.43■■■□□ 2.78
RARA-203ENST00000394086 SLC4A1APQ9BWU0 796 aaKnown RBP32.41■■■□□ 2.78
RARA-203ENST00000394086 SPATA31D1Q6ZQQ2 1576 aa32.41■■■□□ 2.78
RARA-203ENST00000394086 SIN3AQ96ST3 1273 aa32.4■■■□□ 2.78
RARA-203ENST00000394086 HSPA2P54652 639 aa32.39■■■□□ 2.78
RARA-203ENST00000394086 RPRD2Q5VT52 1461 aaKnown RBP32.39■■■□□ 2.78
RARA-203ENST00000394086 ANP32CO43423 234 aa32.39■■■□□ 2.78
RARA-203ENST00000394086 NEFLP07196 543 aa32.38■■■□□ 2.77
RARA-203ENST00000394086 E9PCH4 1651 aa32.37■■■□□ 2.77
RARA-203ENST00000394086 MYO3AQ8NEV4 1616 aa32.36■■■□□ 2.77
RARA-203ENST00000394086 PKD2Q13563 968 aa32.36■■■□□ 2.77
RARA-203ENST00000394086 BCL11AQ9H165 835 aa32.36■■■□□ 2.77
RARA-203ENST00000394086 NOS1P29475 1434 aa32.34■■■□□ 2.77
RARA-203ENST00000394086 MPHOSPH9Q99550 1183 aa32.33■■■□□ 2.77
RARA-203ENST00000394086 NLRP1Q9C000 1473 aa32.31■■■□□ 2.76
RARA-203ENST00000394086 TONSLQ96HA7 1378 aa32.31■■■□□ 2.76
RARA-203ENST00000394086 CEP170BQ9Y4F5 1589 aaPredicted RBP32.3■■■□□ 2.76
RARA-203ENST00000394086 A2ML1A8K2U0 1454 aa32.3■■■□□ 2.76
RARA-203ENST00000394086 FKBP8Q14318 412 aa32.29■■■□□ 2.76
RARA-203ENST00000394086 IDI1Q13907 227 aa32.28■■■□□ 2.76
RARA-203ENST00000394086 SYNMO15061 1565 aa32.27■■■□□ 2.76
RARA-203ENST00000394086 FOXD1Q16676 465 aa32.27■■■□□ 2.76
RARA-203ENST00000394086 SLC52A1Q9NWF4 448 aa32.26■■■□□ 2.75
RARA-203ENST00000394086 ZNF142P52746 1687 aaPredicted RBP32.24■■■□□ 2.75
RARA-203ENST00000394086 STAG3Q9UJ98 1225 aa32.22■■■□□ 2.75
RARA-203ENST00000394086 UGGT1Q9NYU2 1555 aa32.21■■■□□ 2.75
RARA-203ENST00000394086 THEMISQ8N1K5 641 aaPredicted RBP32.21■■■□□ 2.75
RARA-203ENST00000394086 PTPRTO14522 1441 aa32.2■■■□□ 2.75
RARA-203ENST00000394086 PIK3C2BO00750 1634 aa32.16■■■□□ 2.74
RARA-203ENST00000394086 SPHKAPQ2M3C7 1700 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms