RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 PRDM15P57071 1507 aaPredicted RBP12.39□□□□□ -0.43
GAPVD1-204ENST00000394083 DHX29Q7Z478 1369 aaKnown RBP12.39□□□□□ -0.43
GAPVD1-204ENST00000394083 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
GAPVD1-204ENST00000394083 ZNF777Q9ULD5 760 aaPredicted RBP12.36□□□□□ -0.43
GAPVD1-204ENST00000394083 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
GAPVD1-204ENST00000394083 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
GAPVD1-204ENST00000394083 DDX10Q13206 875 aaKnown RBP12.35□□□□□ -0.43
GAPVD1-204ENST00000394083 TET3O43151 1660 aa12.35□□□□□ -0.43
GAPVD1-204ENST00000394083 AFAP1Q8N556 730 aa12.35□□□□□ -0.43
GAPVD1-204ENST00000394083 LAMC1P11047 1609 aa12.34□□□□□ -0.43
GAPVD1-204ENST00000394083 PIK3C2BO00750 1634 aa12.34□□□□□ -0.43
GAPVD1-204ENST00000394083 HSPA5P11021 654 aaKnown RBP12.34□□□□□ -0.43
GAPVD1-204ENST00000394083 DUOX2Q9NRD8 1548 aa12.33□□□□□ -0.44
GAPVD1-204ENST00000394083 EIF2AK4Q9P2K8 1649 aaKnown RBP12.33□□□□□ -0.44
GAPVD1-204ENST00000394083 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
GAPVD1-204ENST00000394083 RALGAPBQ86X10 1494 aa12.33□□□□□ -0.44
GAPVD1-204ENST00000394083 PPLO60437 1756 aa12.33□□□□□ -0.44
GAPVD1-204ENST00000394083 SYNMO15061 1565 aa12.32□□□□□ -0.44
GAPVD1-204ENST00000394083 FANCAO15360 1455 aa12.32□□□□□ -0.44
GAPVD1-204ENST00000394083 PKD2Q13563 968 aa12.31□□□□□ -0.44
GAPVD1-204ENST00000394083 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
GAPVD1-204ENST00000394083 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-204ENST00000394083 PRAG1Q86YV5 1406 aa12.31□□□□□ -0.44
GAPVD1-204ENST00000394083 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
GAPVD1-204ENST00000394083 DIP2CQ9Y2E4 1556 aa12.31□□□□□ -0.44
GAPVD1-204ENST00000394083 TRPM2O94759 1503 aa12.31□□□□□ -0.44
GAPVD1-204ENST00000394083 PTPRTO14522 1441 aa12.3□□□□□ -0.44
GAPVD1-204ENST00000394083 DIP2BQ9P265 1576 aa12.3□□□□□ -0.44
GAPVD1-204ENST00000394083 TSPOAP1O95153 1857 aa12.3□□□□□ -0.44
GAPVD1-204ENST00000394083 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
GAPVD1-204ENST00000394083 ANKRD30AQ9BXX3 1397 aa12.29□□□□□ -0.44
GAPVD1-204ENST00000394083 SETD1AO15047 1707 aaKnown RBP12.29□□□□□ -0.44
GAPVD1-204ENST00000394083 EFCAB6Q5THR3 1501 aa12.29□□□□□ -0.44
GAPVD1-204ENST00000394083 COL17A1Q9UMD9 1497 aaPredicted RBP12.29□□□□□ -0.44
GAPVD1-204ENST00000394083 KIF7Q2M1P5 1343 aa12.28□□□□□ -0.44
GAPVD1-204ENST00000394083 NUP155O75694 1391 aa12.28□□□□□ -0.44
GAPVD1-204ENST00000394083 ERBINQ96RT1 1412 aa12.28□□□□□ -0.44
GAPVD1-204ENST00000394083 HECW2Q9P2P5 1572 aa12.27□□□□□ -0.44
GAPVD1-204ENST00000394083 TONSLQ96HA7 1378 aa12.27□□□□□ -0.45
GAPVD1-204ENST00000394083 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
GAPVD1-204ENST00000394083 NBPF1Q3BBV0 1214 aa12.26□□□□□ -0.45
GAPVD1-204ENST00000394083 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
GAPVD1-204ENST00000394083 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
GAPVD1-204ENST00000394083 TRIM52Q96A61 297 aa12.23□□□□□ -0.45
GAPVD1-204ENST00000394083 ASXL1Q8IXJ9 1541 aa12.23□□□□□ -0.45
GAPVD1-204ENST00000394083 NRXN1Q9ULB1 1477 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 RTEL1-TNFRSF6BF6WH68 1400 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 CNTLNQ9NXG0 1405 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 TESK2Q96S53 571 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 GPRASP1Q5JY77 1395 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 ADGRL1O94910 1474 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 KIF1BO60333 1816 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 KIAA1210Q9ULL0 1709 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 ADGRB1O14514 1584 aa12.22□□□□□ -0.45
GAPVD1-204ENST00000394083 MYO3AQ8NEV4 1616 aa12.21□□□□□ -0.45
GAPVD1-204ENST00000394083 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
GAPVD1-204ENST00000394083 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.45
GAPVD1-204ENST00000394083 POGZQ7Z3K3 1410 aa12.21□□□□□ -0.46
GAPVD1-204ENST00000394083 YEATS2Q9ULM3 1422 aa12.21□□□□□ -0.46
GAPVD1-204ENST00000394083 ADGRB3O60242 1522 aa12.2□□□□□ -0.46
GAPVD1-204ENST00000394083 CDK11AQ9UQ88 783 aaPredicted RBP12.2□□□□□ -0.46
GAPVD1-204ENST00000394083 DISP3Q9P2K9 1392 aa12.2□□□□□ -0.46
GAPVD1-204ENST00000394083 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
GAPVD1-204ENST00000394083 ARHGEF28Q8N1W1 1705 aaKnown RBP12.18□□□□□ -0.46
GAPVD1-204ENST00000394083 GLI2P10070 1586 aa12.18□□□□□ -0.46
GAPVD1-204ENST00000394083 USP47Q96K76 1375 aa12.18□□□□□ -0.46
GAPVD1-204ENST00000394083 ABCC3O15438 1527 aa12.18□□□□□ -0.46
GAPVD1-204ENST00000394083 PREX1Q8TCU6 1659 aa12.17□□□□□ -0.46
GAPVD1-204ENST00000394083 NPATQ14207 1427 aa12.17□□□□□ -0.46
GAPVD1-204ENST00000394083 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
GAPVD1-204ENST00000394083 GOLGB1Q14789 3259 aaKnown RBP12.16□□□□□ -0.46
GAPVD1-204ENST00000394083 MLH3Q9UHC1 1453 aa12.16□□□□□ -0.46
GAPVD1-204ENST00000394083 TMEM131LA2VDJ0 1609 aa12.16□□□□□ -0.46
GAPVD1-204ENST00000394083 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
GAPVD1-204ENST00000394083 NEXMIFQ5QGS0 1516 aa12.15□□□□□ -0.46
GAPVD1-204ENST00000394083 SHPRHQ149N8 1683 aa12.14□□□□□ -0.47
GAPVD1-204ENST00000394083 ZMYM4Q5VZL5 1548 aa12.13□□□□□ -0.47
GAPVD1-204ENST00000394083 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
GAPVD1-204ENST00000394083 RAPGEF3O95398 923 aa12.11□□□□□ -0.47
GAPVD1-204ENST00000394083 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
GAPVD1-204ENST00000394083 ST20-MTHFSA0A0A6YYL1 179 aa12.1□□□□□ -0.47
GAPVD1-204ENST00000394083 CD109Q6YHK3 1445 aa12.09□□□□□ -0.47
GAPVD1-204ENST00000394083 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
GAPVD1-204ENST00000394083 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
GAPVD1-204ENST00000394083 CLTCQ00610 1675 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-204ENST00000394083 NOS1P29475 1434 aa12.08□□□□□ -0.48
GAPVD1-204ENST00000394083 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-204ENST00000394083 ERVK-7P63135 1459 aa12.07□□□□□ -0.48
GAPVD1-204ENST00000394083 DCAF11Q8TEB1 546 aa12.07□□□□□ -0.48
GAPVD1-204ENST00000394083 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
GAPVD1-204ENST00000394083 CCDC144AA2RUR9 1427 aa12.06□□□□□ -0.48
GAPVD1-204ENST00000394083 ADGRF5Q8IZF2 1346 aa12.06□□□□□ -0.48
GAPVD1-204ENST00000394083 PTPRMP28827 1452 aa12.05□□□□□ -0.48
GAPVD1-204ENST00000394083 MYOM2P54296 1465 aa12.05□□□□□ -0.48
GAPVD1-204ENST00000394083 PIK3C2GO75747 1445 aa12.04□□□□□ -0.48
GAPVD1-204ENST00000394083 TSPY4P0CV99 314 aa12.04□□□□□ -0.48
GAPVD1-204ENST00000394083 TSPY10P0CW01 314 aa12.04□□□□□ -0.48
GAPVD1-204ENST00000394083 EFCAB2Q5VUJ9 269 aa12.04□□□□□ -0.48
GAPVD1-204ENST00000394083 TULP4Q9NRJ4 1543 aa12.03□□□□□ -0.48
GAPVD1-204ENST00000394083 LRPPRCP42704 1394 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms