RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 DAPK1P53355 1430 aa13.79□□□□□ -0.2
MTHFD2-201ENST00000394053 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
MTHFD2-201ENST00000394053 NGDNQ8NEJ9 315 aaKnown RBP13.79□□□□□ -0.2
MTHFD2-201ENST00000394053 ARXQ96QS3 562 aa13.79□□□□□ -0.2
MTHFD2-201ENST00000394053 SUPT6HQ7KZ85 1726 aaKnown RBP13.78□□□□□ -0.2
MTHFD2-201ENST00000394053 KIF7Q2M1P5 1343 aa13.78□□□□□ -0.2
MTHFD2-201ENST00000394053 NAIPQ13075 1403 aa13.78□□□□□ -0.2
MTHFD2-201ENST00000394053 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
MTHFD2-201ENST00000394053 RGS3P49796 1198 aa13.78□□□□□ -0.2
MTHFD2-201ENST00000394053 ARHGEF11O15085 1522 aa13.77□□□□□ -0.2
MTHFD2-201ENST00000394053 CCDC146Q8IYE0 955 aa13.77□□□□□ -0.2
MTHFD2-201ENST00000394053 EVC2Q86UK5 1308 aa13.77□□□□□ -0.21
MTHFD2-201ENST00000394053 MYBBP1AQ9BQG0 1328 aaKnown RBP13.77□□□□□ -0.21
MTHFD2-201ENST00000394053 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
MTHFD2-201ENST00000394053 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
MTHFD2-201ENST00000394053 NBPF8Q3BBV2 869 aa13.76□□□□□ -0.21
MTHFD2-201ENST00000394053 PLEKHH2Q8IVE3 1493 aa13.75□□□□□ -0.21
MTHFD2-201ENST00000394053 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
MTHFD2-201ENST00000394053 CCDC7Q96M83 1385 aa13.75□□□□□ -0.21
MTHFD2-201ENST00000394053 NBPF1Q3BBV0 1214 aa13.75□□□□□ -0.21
MTHFD2-201ENST00000394053 KIAA1107Q9UPP5 1409 aa13.74□□□□□ -0.21
MTHFD2-201ENST00000394053 MS4A1P11836 297 aa13.74□□□□□ -0.21
MTHFD2-201ENST00000394053 RTF1Q92541 710 aaKnown RBP13.74□□□□□ -0.21
MTHFD2-201ENST00000394053 WASHC2AQ641Q2 1341 aa13.74□□□□□ -0.21
MTHFD2-201ENST00000394053 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
MTHFD2-201ENST00000394053 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
MTHFD2-201ENST00000394053 GOLGA2Q08379 1002 aa13.72□□□□□ -0.21
MTHFD2-201ENST00000394053 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
MTHFD2-201ENST00000394053 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
MTHFD2-201ENST00000394053 NBR1Q14596 966 aa13.7□□□□□ -0.22
MTHFD2-201ENST00000394053 ABCC5O15440 1437 aa13.69□□□□□ -0.22
MTHFD2-201ENST00000394053 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
MTHFD2-201ENST00000394053 RRP7AQ9Y3A4 280 aaKnown RBP13.69□□□□□ -0.22
MTHFD2-201ENST00000394053 AMPHP49418 695 aa13.68□□□□□ -0.22
MTHFD2-201ENST00000394053 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
MTHFD2-201ENST00000394053 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.67□□□□□ -0.22
MTHFD2-201ENST00000394053 CSB-PGBD3P0DP91 1061 aa13.67□□□□□ -0.22
MTHFD2-201ENST00000394053 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
MTHFD2-201ENST00000394053 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
MTHFD2-201ENST00000394053 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
MTHFD2-201ENST00000394053 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
MTHFD2-201ENST00000394053 PTPN23Q9H3S7 1636 aa13.65□□□□□ -0.22
MTHFD2-201ENST00000394053 COG3Q96JB2 828 aa13.65□□□□□ -0.22
MTHFD2-201ENST00000394053 CD109Q6YHK3 1445 aa13.65□□□□□ -0.22
MTHFD2-201ENST00000394053 IPO8O15397 1037 aaKnown RBP13.65□□□□□ -0.22
MTHFD2-201ENST00000394053 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
MTHFD2-201ENST00000394053 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
MTHFD2-201ENST00000394053 APAF1O14727 1248 aa13.64□□□□□ -0.23
MTHFD2-201ENST00000394053 ERICH6BQ5W0A0 696 aa13.64□□□□□ -0.23
MTHFD2-201ENST00000394053 CLUAP1Q96AJ1 413 aa13.63□□□□□ -0.23
MTHFD2-201ENST00000394053 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
MTHFD2-201ENST00000394053 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
MTHFD2-201ENST00000394053 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
MTHFD2-201ENST00000394053 ZBED9Q6R2W3 1325 aa13.62□□□□□ -0.23
MTHFD2-201ENST00000394053 BECN1Q14457 450 aa13.62□□□□□ -0.23
MTHFD2-201ENST00000394053 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
MTHFD2-201ENST00000394053 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
MTHFD2-201ENST00000394053 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
MTHFD2-201ENST00000394053 ANKRD30BQ9BXX2 1392 aa13.61□□□□□ -0.23
MTHFD2-201ENST00000394053 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
MTHFD2-201ENST00000394053 TXNDC2Q86VQ3 553 aa13.6□□□□□ -0.23
MTHFD2-201ENST00000394053 ATP10BO94823 1461 aa13.6□□□□□ -0.23
MTHFD2-201ENST00000394053 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
MTHFD2-201ENST00000394053 KIF14Q15058 1648 aa13.6□□□□□ -0.23
MTHFD2-201ENST00000394053 OS9Q13438 667 aaPredicted RBP13.59□□□□□ -0.23
MTHFD2-201ENST00000394053 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
MTHFD2-201ENST00000394053 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
MTHFD2-201ENST00000394053 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
MTHFD2-201ENST00000394053 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
MTHFD2-201ENST00000394053 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
MTHFD2-201ENST00000394053 ELL2O00472 640 aaPredicted RBP13.58□□□□□ -0.24
MTHFD2-201ENST00000394053 PRAM1Q96QH2 718 aa13.58□□□□□ -0.24
MTHFD2-201ENST00000394053 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
MTHFD2-201ENST00000394053 CASC1Q6TDU7 716 aa13.57□□□□□ -0.24
MTHFD2-201ENST00000394053 LMOD3Q0VAK6 560 aa13.57□□□□□ -0.24
MTHFD2-201ENST00000394053 BCL2L13Q9BXK5 485 aa13.57□□□□□ -0.24
MTHFD2-201ENST00000394053 APBB1O00213 710 aa13.56□□□□□ -0.24
MTHFD2-201ENST00000394053 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
MTHFD2-201ENST00000394053 PLIN1O60240 522 aa13.56□□□□□ -0.24
MTHFD2-201ENST00000394053 PTPRKQ15262 1439 aa13.56□□□□□ -0.24
MTHFD2-201ENST00000394053 STK31Q9BXU1 1019 aa13.55□□□□□ -0.24
MTHFD2-201ENST00000394053 PSME1Q06323 249 aa13.54□□□□□ -0.24
MTHFD2-201ENST00000394053 ERBINQ96RT1 1412 aa13.54□□□□□ -0.24
MTHFD2-201ENST00000394053 E9PSI1 815 aa13.54□□□□□ -0.24
MTHFD2-201ENST00000394053 MTHFSP49914 203 aa13.54□□□□□ -0.24
MTHFD2-201ENST00000394053 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
MTHFD2-201ENST00000394053 RWDD1Q9H446 243 aaPredicted RBP13.54□□□□□ -0.24
MTHFD2-201ENST00000394053 ADAMTS8Q9UP79 889 aa13.53□□□□□ -0.24
MTHFD2-201ENST00000394053 RAPGEF6Q8TEU7 1601 aa13.53□□□□□ -0.24
MTHFD2-201ENST00000394053 FANCAO15360 1455 aa13.53□□□□□ -0.24
MTHFD2-201ENST00000394053 SLC26A8Q96RN1 970 aa13.53□□□□□ -0.24
MTHFD2-201ENST00000394053 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.24
MTHFD2-201ENST00000394053 ANP32BQ92688 251 aaKnown RBP13.52□□□□□ -0.24
MTHFD2-201ENST00000394053 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.25
MTHFD2-201ENST00000394053 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
MTHFD2-201ENST00000394053 RBM19Q9Y4C8 960 aaKnown RBP13.52□□□□□ -0.25
MTHFD2-201ENST00000394053 NPHP1O15259 732 aa13.51□□□□□ -0.25
MTHFD2-201ENST00000394053 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
MTHFD2-201ENST00000394053 RPGRIP1LQ68CZ1 1315 aa13.51□□□□□ -0.25
MTHFD2-201ENST00000394053 C11orf95C9JLR9 678 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms