RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 MRS2Q9HD23 443 aa18.9■□□□□ 0.62
CCDC142-202ENST00000393965 CARD11Q9BXL7 1154 aa18.89■□□□□ 0.61
CCDC142-202ENST00000393965 PLA2R1Q13018 1463 aa18.88■□□□□ 0.61
CCDC142-202ENST00000393965 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
CCDC142-202ENST00000393965 DHX29Q7Z478 1369 aaKnown RBP18.87■□□□□ 0.61
CCDC142-202ENST00000393965 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
CCDC142-202ENST00000393965 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
CCDC142-202ENST00000393965 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
CCDC142-202ENST00000393965 AFAP1Q8N556 730 aa18.84■□□□□ 0.61
CCDC142-202ENST00000393965 UHRF1BP1Q6BDS2 1440 aa18.84■□□□□ 0.61
CCDC142-202ENST00000393965 SALL2Q9Y467 1007 aaPredicted RBP18.83■□□□□ 0.6
CCDC142-202ENST00000393965 B4GALNT3Q6L9W6 998 aa18.82■□□□□ 0.6
CCDC142-202ENST00000393965 UNC13BO14795 1591 aa18.81■□□□□ 0.6
CCDC142-202ENST00000393965 PLCH2O75038 1416 aa18.81■□□□□ 0.6
CCDC142-202ENST00000393965 MAST1Q9Y2H9 1570 aa18.8■□□□□ 0.6
CCDC142-202ENST00000393965 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
CCDC142-202ENST00000393965 MYT1LQ9UL68 1186 aa18.8■□□□□ 0.6
CCDC142-202ENST00000393965 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
CCDC142-202ENST00000393965 RSPH4AQ5TD94 716 aa18.78■□□□□ 0.6
CCDC142-202ENST00000393965 A2MP01023 1474 aa18.77■□□□□ 0.6
CCDC142-202ENST00000393965 PLXNC1O60486 1568 aa18.77■□□□□ 0.6
CCDC142-202ENST00000393965 BCL11AQ9H165 835 aa18.77■□□□□ 0.59
CCDC142-202ENST00000393965 ABCC1P33527 1531 aa18.76■□□□□ 0.59
CCDC142-202ENST00000393965 TRPM1Q7Z4N2 1603 aa18.75■□□□□ 0.59
CCDC142-202ENST00000393965 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
CCDC142-202ENST00000393965 IQGAP3Q86VI3 1631 aa18.75■□□□□ 0.59
CCDC142-202ENST00000393965 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
CCDC142-202ENST00000393965 NBR1Q14596 966 aa18.75■□□□□ 0.59
CCDC142-202ENST00000393965 DUOX2Q9NRD8 1548 aa18.72■□□□□ 0.59
CCDC142-202ENST00000393965 UHRF1BP1LA0JNW5 1464 aa18.72■□□□□ 0.59
CCDC142-202ENST00000393965 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
CCDC142-202ENST00000393965 MSH5O43196 834 aa18.69■□□□□ 0.58
CCDC142-202ENST00000393965 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
CCDC142-202ENST00000393965 E9PCH4 1651 aa18.68■□□□□ 0.58
CCDC142-202ENST00000393965 MAGI2Q86UL8 1455 aa18.67■□□□□ 0.58
CCDC142-202ENST00000393965 DISP3Q9P2K9 1392 aa18.66■□□□□ 0.58
CCDC142-202ENST00000393965 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
CCDC142-202ENST00000393965 ZFYVE16Q7Z3T8 1539 aa18.66■□□□□ 0.58
CCDC142-202ENST00000393965 ZBED9Q6R2W3 1325 aa18.65■□□□□ 0.58
CCDC142-202ENST00000393965 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
CCDC142-202ENST00000393965 FANCAO15360 1455 aa18.63■□□□□ 0.57
CCDC142-202ENST00000393965 TESK2Q96S53 571 aa18.62■□□□□ 0.57
CCDC142-202ENST00000393965 SCAPERQ9BY12 1400 aa18.62■□□□□ 0.57
CCDC142-202ENST00000393965 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
CCDC142-202ENST00000393965 PNISRQ8TF01 805 aaKnown RBP18.62■□□□□ 0.57
CCDC142-202ENST00000393965 ATP10AO60312 1499 aa18.6■□□□□ 0.57
CCDC142-202ENST00000393965 UGGT1Q9NYU2 1555 aa18.6■□□□□ 0.57
CCDC142-202ENST00000393965 ARID4BQ4LE39 1312 aaPredicted RBP18.6■□□□□ 0.57
CCDC142-202ENST00000393965 KIF3BO15066 747 aa18.6■□□□□ 0.57
CCDC142-202ENST00000393965 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
CCDC142-202ENST00000393965 TMC1Q8TDI8 760 aa18.59■□□□□ 0.57
CCDC142-202ENST00000393965 ABCA9Q8IUA7 1624 aa18.59■□□□□ 0.57
CCDC142-202ENST00000393965 PRDM15P57071 1507 aaPredicted RBP18.59■□□□□ 0.57
CCDC142-202ENST00000393965 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.57
CCDC142-202ENST00000393965 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
CCDC142-202ENST00000393965 ATP7AQ04656 1500 aa18.57■□□□□ 0.56
CCDC142-202ENST00000393965 GPRASP1Q5JY77 1395 aa18.57■□□□□ 0.56
CCDC142-202ENST00000393965 ADGRL1O94910 1474 aa18.57■□□□□ 0.56
CCDC142-202ENST00000393965 PER1O15534 1290 aaPredicted RBP18.56■□□□□ 0.56
CCDC142-202ENST00000393965 CFAP65Q6ZU64 1925 aaKnown RBP18.56■□□□□ 0.56
CCDC142-202ENST00000393965 NPM1P06748 294 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC142-202ENST00000393965 INO80Q9ULG1 1556 aaPredicted RBP18.55■□□□□ 0.56
CCDC142-202ENST00000393965 SPHKAPQ2M3C7 1700 aa18.55■□□□□ 0.56
CCDC142-202ENST00000393965 COL17A1Q9UMD9 1497 aaPredicted RBP18.54■□□□□ 0.56
CCDC142-202ENST00000393965 PANK3Q9H999 370 aa18.54■□□□□ 0.56
CCDC142-202ENST00000393965 MADDQ8WXG6 1647 aa18.53■□□□□ 0.56
CCDC142-202ENST00000393965 DEPDC5O75140 1603 aa18.52■□□□□ 0.56
CCDC142-202ENST00000393965 MYBBP1AQ9BQG0 1328 aaKnown RBP18.52■□□□□ 0.56
CCDC142-202ENST00000393965 RTEL1-TNFRSF6BF6WH68 1400 aa18.52■□□□□ 0.56
CCDC142-202ENST00000393965 MROH1Q8NDA8 1641 aa18.51■□□□□ 0.55
CCDC142-202ENST00000393965 CEP152O94986 1710 aa18.51■□□□□ 0.55
CCDC142-202ENST00000393965 RNF17Q9BXT8 1623 aaKnown RBP18.51■□□□□ 0.55
CCDC142-202ENST00000393965 TRPM2O94759 1503 aa18.5■□□□□ 0.55
CCDC142-202ENST00000393965 KIDINS220Q9ULH0 1771 aa18.5■□□□□ 0.55
CCDC142-202ENST00000393965 ARAP3Q8WWN8 1544 aa18.5■□□□□ 0.55
CCDC142-202ENST00000393965 LAMC1P11047 1609 aa18.48■□□□□ 0.55
CCDC142-202ENST00000393965 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
CCDC142-202ENST00000393965 PARD3Q8TEW0 1356 aa18.48■□□□□ 0.55
CCDC142-202ENST00000393965 TET3O43151 1660 aa18.48■□□□□ 0.55
CCDC142-202ENST00000393965 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
CCDC142-202ENST00000393965 PTPRTO14522 1441 aa18.47■□□□□ 0.55
CCDC142-202ENST00000393965 CYB5RLQ6IPT4 315 aa18.47■□□□□ 0.55
CCDC142-202ENST00000393965 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
CCDC142-202ENST00000393965 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
CCDC142-202ENST00000393965 RALBP1Q15311 655 aa18.46■□□□□ 0.55
CCDC142-202ENST00000393965 NUDCQ9Y266 331 aa18.46■□□□□ 0.55
CCDC142-202ENST00000393965 SMG6Q86US8 1419 aaKnown RBP18.46■□□□□ 0.55
CCDC142-202ENST00000393965 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
CCDC142-202ENST00000393965 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
CCDC142-202ENST00000393965 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
CCDC142-202ENST00000393965 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
CCDC142-202ENST00000393965 ADGRF5Q8IZF2 1346 aa18.45■□□□□ 0.54
CCDC142-202ENST00000393965 BRD4O60885 1362 aaPredicted RBP18.45■□□□□ 0.54
CCDC142-202ENST00000393965 TMF1P82094 1093 aa18.45■□□□□ 0.54
CCDC142-202ENST00000393965 PPP4R2Q9NY27 417 aa18.44■□□□□ 0.54
CCDC142-202ENST00000393965 MROH2AA6NES4 1674 aa18.44■□□□□ 0.54
CCDC142-202ENST00000393965 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
CCDC142-202ENST00000393965 GGT6Q6P531 493 aa18.42■□□□□ 0.54
CCDC142-202ENST00000393965 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
CCDC142-202ENST00000393965 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms