RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 PKD2Q13563 968 aa16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
PLXNA1-201ENST00000393409 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
PLXNA1-201ENST00000393409 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
PLXNA1-201ENST00000393409 APBB1O00213 710 aa16.09■□□□□ 0.17
PLXNA1-201ENST00000393409 DHX57Q6P158 1386 aaKnown RBP16.09■□□□□ 0.17
PLXNA1-201ENST00000393409 AAMPQ13685 434 aa16.08■□□□□ 0.17
PLXNA1-201ENST00000393409 TPM2P07951 284 aa16.07■□□□□ 0.16
PLXNA1-201ENST00000393409 NGEFQ8N5V2 710 aa16.07■□□□□ 0.16
PLXNA1-201ENST00000393409 STK31Q9BXU1 1019 aa16.07■□□□□ 0.16
PLXNA1-201ENST00000393409 E9PSI1 815 aa16.06■□□□□ 0.16
PLXNA1-201ENST00000393409 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
PLXNA1-201ENST00000393409 FAM13BQ9NYF5 915 aa16.06■□□□□ 0.16
PLXNA1-201ENST00000393409 REC8O95072 547 aa16.05■□□□□ 0.16
PLXNA1-201ENST00000393409 NUP155O75694 1391 aa16.05■□□□□ 0.16
PLXNA1-201ENST00000393409 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
PLXNA1-201ENST00000393409 CHMP5Q9NZZ3 219 aa16.05■□□□□ 0.16
PLXNA1-201ENST00000393409 TPM1P09493 284 aa16.05■□□□□ 0.16
PLXNA1-201ENST00000393409 TSR1Q2NL82 804 aaKnown RBP16.05■□□□□ 0.16
PLXNA1-201ENST00000393409 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
PLXNA1-201ENST00000393409 TRHP20396 242 aaPredicted RBP16.04■□□□□ 0.16
PLXNA1-201ENST00000393409 MRE11P49959 708 aa16.03■□□□□ 0.16
PLXNA1-201ENST00000393409 CLSTN1O94985 981 aa16.03■□□□□ 0.16
PLXNA1-201ENST00000393409 CUX1P39880 1505 aa16.03■□□□□ 0.16
PLXNA1-201ENST00000393409 BECN2A8MW95 431 aa16.03■□□□□ 0.16
PLXNA1-201ENST00000393409 TMX4Q9H1E5 349 aaPredicted RBP16.03■□□□□ 0.16
PLXNA1-201ENST00000393409 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.15
PLXNA1-201ENST00000393409 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.15
PLXNA1-201ENST00000393409 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.15
PLXNA1-201ENST00000393409 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
PLXNA1-201ENST00000393409 H3BQV1 296 aa16.01■□□□□ 0.15
PLXNA1-201ENST00000393409 IFFO2Q5TF58 517 aa16.01■□□□□ 0.15
PLXNA1-201ENST00000393409 DIAPH3Q9NSV4 1193 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 NUCB2P80303 420 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 TERF2IPQ9NYB0 399 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
PLXNA1-201ENST00000393409 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 ROCK1Q13464 1354 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 UACAQ9BZF9 1416 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 CCDC66A2RUB6 948 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 FOXD1Q16676 465 aa16■□□□□ 0.15
PLXNA1-201ENST00000393409 L3MBTL2Q969R5 705 aa15.99■□□□□ 0.15
PLXNA1-201ENST00000393409 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
PLXNA1-201ENST00000393409 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
PLXNA1-201ENST00000393409 ZKSCAN2Q63HK3 967 aa15.98■□□□□ 0.15
PLXNA1-201ENST00000393409 USP47Q96K76 1375 aa15.98■□□□□ 0.15
PLXNA1-201ENST00000393409 NASPP49321 788 aaPredicted RBP15.98■□□□□ 0.15
PLXNA1-201ENST00000393409 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
PLXNA1-201ENST00000393409 PKNOX2Q96KN3 472 aa15.98■□□□□ 0.15
PLXNA1-201ENST00000393409 CALRP27797 417 aaKnown RBP15.98■□□□□ 0.15
PLXNA1-201ENST00000393409 ACBD3Q9H3P7 528 aa15.98■□□□□ 0.15
PLXNA1-201ENST00000393409 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
PLXNA1-201ENST00000393409 DDX19BQ9UMR2 479 aa15.97■□□□□ 0.15
PLXNA1-201ENST00000393409 CRBNQ96SW2 442 aa15.97■□□□□ 0.15
PLXNA1-201ENST00000393409 EXOC6Q8TAG9 804 aa15.96■□□□□ 0.15
PLXNA1-201ENST00000393409 CLUAP1Q96AJ1 413 aa15.96■□□□□ 0.14
PLXNA1-201ENST00000393409 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.14
PLXNA1-201ENST00000393409 SLC4A3P48751 1232 aa15.95■□□□□ 0.14
PLXNA1-201ENST00000393409 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
PLXNA1-201ENST00000393409 HOOK1Q9UJC3 728 aaKnown RBP15.95■□□□□ 0.14
PLXNA1-201ENST00000393409 CCDC144AA2RUR9 1427 aa15.95■□□□□ 0.14
PLXNA1-201ENST00000393409 RAPGEF2Q9Y4G8 1499 aa15.95■□□□□ 0.14
PLXNA1-201ENST00000393409 CCAR2Q8N163 923 aaKnown RBP15.95■□□□□ 0.14
PLXNA1-201ENST00000393409 CCDC146Q8IYE0 955 aa15.95■□□□□ 0.14
PLXNA1-201ENST00000393409 RASSF8Q8NHQ8 419 aa15.94■□□□□ 0.14
PLXNA1-201ENST00000393409 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
PLXNA1-201ENST00000393409 ZNF592Q92610 1267 aa15.94■□□□□ 0.14
PLXNA1-201ENST00000393409 TPD52L1Q16890 204 aaPredicted RBP15.94■□□□□ 0.14
PLXNA1-201ENST00000393409 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
PLXNA1-201ENST00000393409 ANKRD45Q5TZF3 282 aa15.93■□□□□ 0.14
PLXNA1-201ENST00000393409 IPO7O95373 1038 aaKnown RBP15.92■□□□□ 0.14
PLXNA1-201ENST00000393409 GORABQ5T7V8 394 aa15.92■□□□□ 0.14
PLXNA1-201ENST00000393409 AK7Q96M32 723 aa15.92■□□□□ 0.14
PLXNA1-201ENST00000393409 LETM1O95202 739 aaPredicted RBP15.92■□□□□ 0.14
PLXNA1-201ENST00000393409 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
PLXNA1-201ENST00000393409 CEP89Q96ST8 783 aa15.92■□□□□ 0.14
PLXNA1-201ENST00000393409 RUFY2Q8WXA3 655 aa15.92■□□□□ 0.14
PLXNA1-201ENST00000393409 FOXD4L5Q5VV16 416 aaPredicted RBP15.91■□□□□ 0.14
PLXNA1-201ENST00000393409 FOXD4L4Q8WXT5 416 aaPredicted RBP15.91■□□□□ 0.14
PLXNA1-201ENST00000393409 RRP9O43818 475 aaKnown RBP15.91■□□□□ 0.14
PLXNA1-201ENST00000393409 ANKRD20A12PQ8NF67 263 aa15.91■□□□□ 0.14
PLXNA1-201ENST00000393409 HOMER1Q86YM7 354 aa15.91■□□□□ 0.14
PLXNA1-201ENST00000393409 RSPH4AQ5TD94 716 aa15.91■□□□□ 0.14
PLXNA1-201ENST00000393409 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
PLXNA1-201ENST00000393409 HSP90B2PQ58FF3 399 aa15.9■□□□□ 0.14
PLXNA1-201ENST00000393409 LRRFIP1Q32MZ4 808 aaKnown RBP15.9■□□□□ 0.14
PLXNA1-201ENST00000393409 NAT10Q9H0A0 1025 aaKnown RBP15.9■□□□□ 0.14
PLXNA1-201ENST00000393409 PRDM2Q13029 1718 aa15.89■□□□□ 0.14
PLXNA1-201ENST00000393409 TAF3Q5VWG9 929 aa15.89■□□□□ 0.13
PLXNA1-201ENST00000393409 ZKSCAN1P17029 563 aaPredicted RBP15.88■□□□□ 0.13
PLXNA1-201ENST00000393409 KIF21BO75037 1637 aa15.88■□□□□ 0.13
PLXNA1-201ENST00000393409 PLIN1O60240 522 aa15.88■□□□□ 0.13
PLXNA1-201ENST00000393409 IFT57Q9NWB7 429 aa15.88■□□□□ 0.13
PLXNA1-201ENST00000393409 C22orf23Q9BZE7 217 aa15.88■□□□□ 0.13
PLXNA1-201ENST00000393409 CREBRFQ8IUR6 639 aa15.88■□□□□ 0.13
PLXNA1-201ENST00000393409 INTS3Q68E01 1043 aaKnown RBP15.88■□□□□ 0.13
PLXNA1-201ENST00000393409 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms