RNA–Protein interactions for RNA: ENST00000392347.5

CCDC57-206, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-206ENST00000392347 ERCC6Q03468 1493 aa17.52■□□□□ 0.4
CCDC57-206ENST00000392347 ZNF777Q9ULD5 760 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-206ENST00000392347 ARHGEF11O15085 1522 aa17.52■□□□□ 0.4
CCDC57-206ENST00000392347 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.39
CCDC57-206ENST00000392347 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
CCDC57-206ENST00000392347 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
CCDC57-206ENST00000392347 DAPK1P53355 1430 aa17.51■□□□□ 0.39
CCDC57-206ENST00000392347 NAP1L5Q96NT1 182 aaPredicted RBP17.51■□□□□ 0.39
CCDC57-206ENST00000392347 ABCC5O15440 1437 aa17.5■□□□□ 0.39
CCDC57-206ENST00000392347 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
CCDC57-206ENST00000392347 KDM5CP41229 1560 aa17.47■□□□□ 0.39
CCDC57-206ENST00000392347 MRC2Q9UBG0 1479 aa17.47■□□□□ 0.39
CCDC57-206ENST00000392347 PZPP20742 1482 aa17.46■□□□□ 0.39
CCDC57-206ENST00000392347 SEC24BO95487 1268 aa17.46■□□□□ 0.39
CCDC57-206ENST00000392347 ZMYND15Q9H091 742 aa17.46■□□□□ 0.39
CCDC57-206ENST00000392347 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
CCDC57-206ENST00000392347 GZF1Q9H116 711 aaPredicted RBP17.45■□□□□ 0.38
CCDC57-206ENST00000392347 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
CCDC57-206ENST00000392347 SPRYD3Q8NCJ5 442 aa17.45■□□□□ 0.38
CCDC57-206ENST00000392347 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
CCDC57-206ENST00000392347 EPRSP07814 1512 aaKnown RBP17.44■□□□□ 0.38
CCDC57-206ENST00000392347 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
CCDC57-206ENST00000392347 GLIPR1L2Q4G1C9 344 aa17.43■□□□□ 0.38
CCDC57-206ENST00000392347 KIAA1107Q9UPP5 1409 aa17.42■□□□□ 0.38
CCDC57-206ENST00000392347 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
CCDC57-206ENST00000392347 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-206ENST00000392347 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
CCDC57-206ENST00000392347 RGL3Q3MIN7 710 aa17.41■□□□□ 0.38
CCDC57-206ENST00000392347 PANK2Q9BZ23 570 aa17.4■□□□□ 0.38
CCDC57-206ENST00000392347 PANK3Q9H999 370 aa17.4■□□□□ 0.38
CCDC57-206ENST00000392347 NBPF1Q3BBV0 1214 aa17.39■□□□□ 0.38
CCDC57-206ENST00000392347 USP19O94966 1318 aa17.39■□□□□ 0.37
CCDC57-206ENST00000392347 DUSP27Q5VZP5 1158 aa17.39■□□□□ 0.37
CCDC57-206ENST00000392347 IGHDP01880 384 aa17.38■□□□□ 0.37
CCDC57-206ENST00000392347 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
CCDC57-206ENST00000392347 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
CCDC57-206ENST00000392347 HSP90AA2PQ14568 343 aaPredicted RBP17.37■□□□□ 0.37
CCDC57-206ENST00000392347 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
CCDC57-206ENST00000392347 XRCC6P12956 609 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCDC57-206ENST00000392347 KIF14Q15058 1648 aa17.37■□□□□ 0.37
CCDC57-206ENST00000392347 BCAR3O75815 825 aa17.37■□□□□ 0.37
CCDC57-206ENST00000392347 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
CCDC57-206ENST00000392347 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
CCDC57-206ENST00000392347 RALGAPBQ86X10 1494 aa17.36■□□□□ 0.37
CCDC57-206ENST00000392347 NUP155O75694 1391 aa17.36■□□□□ 0.37
CCDC57-206ENST00000392347 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
CCDC57-206ENST00000392347 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
CCDC57-206ENST00000392347 BECN1Q14457 450 aa17.34■□□□□ 0.37
CCDC57-206ENST00000392347 HSP90AA1P07900 732 aaKnown RBP17.33■□□□□ 0.37
CCDC57-206ENST00000392347 GOLGA2Q08379 1002 aa17.33■□□□□ 0.37
CCDC57-206ENST00000392347 WDR43Q15061 677 aaKnown RBP eCLIP17.33■□□□□ 0.37
CCDC57-206ENST00000392347 WDR62O43379 1518 aa17.33■□□□□ 0.36
CCDC57-206ENST00000392347 GOLGA6L3A6NEY3 463 aa17.32■□□□□ 0.36
CCDC57-206ENST00000392347 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
CCDC57-206ENST00000392347 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
CCDC57-206ENST00000392347 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
CCDC57-206ENST00000392347 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
CCDC57-206ENST00000392347 DISP3Q9P2K9 1392 aa17.28■□□□□ 0.36
CCDC57-206ENST00000392347 KIAA0586Q9BVV6 1533 aa17.28■□□□□ 0.36
CCDC57-206ENST00000392347 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
CCDC57-206ENST00000392347 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
CCDC57-206ENST00000392347 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
CCDC57-206ENST00000392347 PANK1Q8TE04 598 aa17.27■□□□□ 0.35
CCDC57-206ENST00000392347 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
CCDC57-206ENST00000392347 TBC1D2Q9BYX2 928 aa17.26■□□□□ 0.35
CCDC57-206ENST00000392347 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
CCDC57-206ENST00000392347 ANKRD50Q9ULJ7 1429 aa17.25■□□□□ 0.35
CCDC57-206ENST00000392347 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
CCDC57-206ENST00000392347 JPH4Q96JJ6 628 aa17.25■□□□□ 0.35
CCDC57-206ENST00000392347 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
CCDC57-206ENST00000392347 CLCN1P35523 988 aa17.25■□□□□ 0.35
CCDC57-206ENST00000392347 PLB1Q6P1J6 1458 aa17.24■□□□□ 0.35
CCDC57-206ENST00000392347 APAF1O14727 1248 aa17.24■□□□□ 0.35
CCDC57-206ENST00000392347 PRG4Q92954 1404 aaPredicted RBP17.23■□□□□ 0.35
CCDC57-206ENST00000392347 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
CCDC57-206ENST00000392347 KIAA0556O60303 1618 aa17.23■□□□□ 0.35
CCDC57-206ENST00000392347 TESK2Q96S53 571 aa17.23■□□□□ 0.35
CCDC57-206ENST00000392347 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
CCDC57-206ENST00000392347 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
CCDC57-206ENST00000392347 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
CCDC57-206ENST00000392347 MCM4P33991 863 aa17.22■□□□□ 0.35
CCDC57-206ENST00000392347 DISP1Q96F81 1524 aa17.22■□□□□ 0.35
CCDC57-206ENST00000392347 UPF2Q9HAU5 1272 aaKnown RBP17.21■□□□□ 0.35
CCDC57-206ENST00000392347 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
CCDC57-206ENST00000392347 E9PCH4 1651 aa17.21■□□□□ 0.35
CCDC57-206ENST00000392347 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.34
CCDC57-206ENST00000392347 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.34
CCDC57-206ENST00000392347 ZNF521Q96K83 1311 aa17.2■□□□□ 0.34
CCDC57-206ENST00000392347 FSD2A1L4K1 749 aa17.2■□□□□ 0.34
CCDC57-206ENST00000392347 TRAK2O60296 914 aa17.2■□□□□ 0.34
CCDC57-206ENST00000392347 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
CCDC57-206ENST00000392347 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
CCDC57-206ENST00000392347 TMF1P82094 1093 aa17.18■□□□□ 0.34
CCDC57-206ENST00000392347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.342e-9■■□□□ 14
CCDC57-206ENST00000392347 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
CCDC57-206ENST00000392347 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
CCDC57-206ENST00000392347 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
CCDC57-206ENST00000392347 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
CCDC57-206ENST00000392347 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
CCDC57-206ENST00000392347 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms