RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 MCM4P33991 863 aa21.45■■□□□ 1.03
TRAF3IP1-202ENST00000391993 GRPEL1Q9HAV7 217 aa21.45■■□□□ 1.03
TRAF3IP1-202ENST00000391993 FOXD4L6Q3SYB3 417 aaPredicted RBP21.45■■□□□ 1.02
TRAF3IP1-202ENST00000391993 FOXD4L3Q6VB84 417 aaPredicted RBP21.45■■□□□ 1.02
TRAF3IP1-202ENST00000391993 ZHX1Q9UKY1 873 aaPredicted RBP21.44■■□□□ 1.02
TRAF3IP1-202ENST00000391993 TMF1P82094 1093 aa21.42■■□□□ 1.02
TRAF3IP1-202ENST00000391993 BCL11BQ9C0K0 894 aaPredicted RBP21.42■■□□□ 1.02
TRAF3IP1-202ENST00000391993 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
TRAF3IP1-202ENST00000391993 DDX11L8A8MPP1 907 aa21.41■■□□□ 1.02
TRAF3IP1-202ENST00000391993 MAPK8IP2Q13387 824 aaPredicted RBP21.41■■□□□ 1.02
TRAF3IP1-202ENST00000391993 CENPJQ9HC77 1338 aaPredicted RBP21.41■■□□□ 1.02
TRAF3IP1-202ENST00000391993 APBB1O00213 710 aa21.4■■□□□ 1.02
TRAF3IP1-202ENST00000391993 SEC24BO95487 1268 aa21.39■■□□□ 1.02
TRAF3IP1-202ENST00000391993 RWDD1Q9H446 243 aaPredicted RBP21.39■■□□□ 1.02
TRAF3IP1-202ENST00000391993 C8orf34Q49A92 452 aa21.39■■□□□ 1.01
TRAF3IP1-202ENST00000391993 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
TRAF3IP1-202ENST00000391993 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
TRAF3IP1-202ENST00000391993 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
TRAF3IP1-202ENST00000391993 C22orf23Q9BZE7 217 aa21.38■■□□□ 1.01
TRAF3IP1-202ENST00000391993 SLC24A1O60721 1099 aa21.38■■□□□ 1.01
TRAF3IP1-202ENST00000391993 NASPP49321 788 aaPredicted RBP21.37■■□□□ 1.01
TRAF3IP1-202ENST00000391993 IGF1RP08069 1367 aa21.36■■□□□ 1.01
TRAF3IP1-202ENST00000391993 PRXQ9BXM0 1461 aa21.36■■□□□ 1.01
TRAF3IP1-202ENST00000391993 RNF214Q8ND24 703 aa21.35■■□□□ 1.01
TRAF3IP1-202ENST00000391993 TBC1D2Q9BYX2 928 aa21.35■■□□□ 1.01
TRAF3IP1-202ENST00000391993 CLCN1P35523 988 aa21.35■■□□□ 1.01
TRAF3IP1-202ENST00000391993 PMFBP1Q8TBY8 1022 aa21.34■■□□□ 1.01
TRAF3IP1-202ENST00000391993 BRD4O60885 1362 aaPredicted RBP21.34■■□□□ 1.01
TRAF3IP1-202ENST00000391993 NUP155O75694 1391 aa21.34■■□□□ 1.01
TRAF3IP1-202ENST00000391993 NOL8Q76FK4 1167 aaKnown RBP21.33■■□□□ 1.01
TRAF3IP1-202ENST00000391993 NCOA1Q15788 1441 aa21.32■■□□□ 1
TRAF3IP1-202ENST00000391993 TPM2P07951 284 aa21.32■■□□□ 1
TRAF3IP1-202ENST00000391993 PDZRN3Q9UPQ7 1066 aa21.31■■□□□ 1
TRAF3IP1-202ENST00000391993 U2SURPO15042 1029 aaKnown RBP21.3■■□□□ 1
TRAF3IP1-202ENST00000391993 TOP2BQ02880 1626 aa21.3■■□□□ 1
TRAF3IP1-202ENST00000391993 AQRO60306 1485 aaKnown RBP eCLIP21.3■■□□□ 13e-8■■■■□ 21.5
TRAF3IP1-202ENST00000391993 IGHDP01880 384 aa21.29■■□□□ 1
TRAF3IP1-202ENST00000391993 CUX1P39880 1505 aa21.29■■□□□ 1
TRAF3IP1-202ENST00000391993 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.29■■□□□ 1
TRAF3IP1-202ENST00000391993 NAIPQ13075 1403 aa21.29■■□□□ 1
TRAF3IP1-202ENST00000391993 XPCQ01831 940 aaPredicted RBP21.28■■□□□ 1
TRAF3IP1-202ENST00000391993 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
TRAF3IP1-202ENST00000391993 CAVIN1Q6NZI2 390 aaKnown RBP21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 MCTP1Q6DN14 999 aa21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 NBPF1Q3BBV0 1214 aa21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 UQCRHLA0A096LP55 91 aa21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 UQCRHP07919 91 aa21.26■□□□□ 0.99
TRAF3IP1-202ENST00000391993 LNPKQ9C0E8 428 aa21.25■□□□□ 0.99
TRAF3IP1-202ENST00000391993 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
TRAF3IP1-202ENST00000391993 TIAM1Q13009 1591 aa21.25■□□□□ 0.99
TRAF3IP1-202ENST00000391993 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
TRAF3IP1-202ENST00000391993 RNF123Q5XPI4 1314 aa21.24■□□□□ 0.99
TRAF3IP1-202ENST00000391993 KIAA2012Q0VF49 1180 aa21.23■□□□□ 0.99
TRAF3IP1-202ENST00000391993 CFTRP13569 1480 aa21.22■□□□□ 0.99
TRAF3IP1-202ENST00000391993 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
TRAF3IP1-202ENST00000391993 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
TRAF3IP1-202ENST00000391993 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
TRAF3IP1-202ENST00000391993 U2AF1L5P0DN76 240 aaPredicted RBP21.19■□□□□ 0.98
TRAF3IP1-202ENST00000391993 U2AF1Q01081 240 aaKnown RBP eCLIP21.19■□□□□ 0.98
TRAF3IP1-202ENST00000391993 E9PSI1 815 aa21.19■□□□□ 0.98
TRAF3IP1-202ENST00000391993 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
TRAF3IP1-202ENST00000391993 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
TRAF3IP1-202ENST00000391993 MAP3K1Q13233 1512 aa21.18■□□□□ 0.98
TRAF3IP1-202ENST00000391993 SKOR2Q2VWA4 1001 aaPredicted RBP21.17■□□□□ 0.98
TRAF3IP1-202ENST00000391993 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
TRAF3IP1-202ENST00000391993 CHAF1AQ13111 956 aaPredicted RBP21.17■□□□□ 0.98
TRAF3IP1-202ENST00000391993 ANKRD45Q5TZF3 282 aa21.17■□□□□ 0.98
TRAF3IP1-202ENST00000391993 MORC1Q86VD1 984 aa21.17■□□□□ 0.98
TRAF3IP1-202ENST00000391993 ZNF771Q7L3S4 317 aaPredicted RBP21.16■□□□□ 0.98
TRAF3IP1-202ENST00000391993 RAD54L2Q9Y4B4 1467 aa21.16■□□□□ 0.98
TRAF3IP1-202ENST00000391993 CBX1P83916 185 aa21.16■□□□□ 0.98
TRAF3IP1-202ENST00000391993 ZSCAN30Q86W11 494 aa21.16■□□□□ 0.98
TRAF3IP1-202ENST00000391993 NCOA2Q15596 1464 aa21.14■□□□□ 0.97
TRAF3IP1-202ENST00000391993 IGSF3O75054 1194 aa21.14■□□□□ 0.97
TRAF3IP1-202ENST00000391993 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
TRAF3IP1-202ENST00000391993 DUSP27Q5VZP5 1158 aa21.13■□□□□ 0.97
TRAF3IP1-202ENST00000391993 CDCA8Q53HL2 280 aa21.13■□□□□ 0.97
TRAF3IP1-202ENST00000391993 CFAP53Q96M91 514 aa21.13■□□□□ 0.97
TRAF3IP1-202ENST00000391993 CCDC173Q0VFZ6 552 aa21.12■□□□□ 0.97
TRAF3IP1-202ENST00000391993 TNPO1Q92973 898 aaKnown RBP21.11■□□□□ 0.97
TRAF3IP1-202ENST00000391993 PRPF40AO75400 957 aaKnown RBP21.11■□□□□ 0.97
TRAF3IP1-202ENST00000391993 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
TRAF3IP1-202ENST00000391993 DRC7Q8IY82 874 aa21.1■□□□□ 0.97
TRAF3IP1-202ENST00000391993 SAFB2Q14151 953 aaKnown RBP eCLIP21.09■□□□□ 0.97
TRAF3IP1-202ENST00000391993 PLEKHD1A6NEE1 506 aa21.07■□□□□ 0.96
TRAF3IP1-202ENST00000391993 MAP7D2Q96T17 732 aa21.07■□□□□ 0.96
TRAF3IP1-202ENST00000391993 TNNQ9UQP3 1299 aa21.07■□□□□ 0.96
TRAF3IP1-202ENST00000391993 FAM177BA6PVY3 158 aa21.07■□□□□ 0.96
TRAF3IP1-202ENST00000391993 HNRNPMP52272 730 aaKnown RBP eCLIP21.07■□□□□ 0.962e-7■■■■□ 20.1
TRAF3IP1-202ENST00000391993 DHX29Q7Z478 1369 aaKnown RBP21.06■□□□□ 0.96
TRAF3IP1-202ENST00000391993 SSFA2P28290 1259 aa21.06■□□□□ 0.96
TRAF3IP1-202ENST00000391993 TBC1D32Q96NH3 1257 aa21.06■□□□□ 0.96
TRAF3IP1-202ENST00000391993 ZKSCAN2Q63HK3 967 aa21.05■□□□□ 0.96
TRAF3IP1-202ENST00000391993 PTMSP20962 102 aa21.05■□□□□ 0.96
TRAF3IP1-202ENST00000391993 SLFN5Q08AF3 891 aa21.05■□□□□ 0.96
TRAF3IP1-202ENST00000391993 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
TRAF3IP1-202ENST00000391993 DZIP1LQ8IYY4 767 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms