RNA–Protein interactions for RNA: ENST00000391249.2

U3.28-201, humanhuman

BASIC

Gene U3, Length 210 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.28-201ENST00000391249 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
U3.28-201ENST00000391249 CCDC180Q9P1Z9 1646 aa10.51□□□□□ -0.73
U3.28-201ENST00000391249 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
U3.28-201ENST00000391249 DDX12PQ92771 950 aa10.5□□□□□ -0.73
U3.28-201ENST00000391249 BHMG1C9JSJ3 638 aaPredicted RBP10.49□□□□□ -0.73
U3.28-201ENST00000391249 COL9A1P20849 921 aa10.48□□□□□ -0.73
U3.28-201ENST00000391249 PPP1R3GB7ZBB8 358 aa10.47□□□□□ -0.73
U3.28-201ENST00000391249 C6orf132Q5T0Z8 1188 aa10.46□□□□□ -0.73
U3.28-201ENST00000391249 EN1Q05925 392 aaPredicted RBP10.43□□□□□ -0.74
U3.28-201ENST00000391249 NBR1Q14596 966 aa10.43□□□□□ -0.74
U3.28-201ENST00000391249 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
U3.28-201ENST00000391249 KCNV2Q8TDN2 545 aa10.42□□□□□ -0.74
U3.28-201ENST00000391249 ARHGEF1Q92888 912 aaKnown RBP10.42□□□□□ -0.74
U3.28-201ENST00000391249 STAC3Q96MF2 364 aa10.42□□□□□ -0.74
U3.28-201ENST00000391249 PRIM1P49642 420 aaKnown RBP10.41□□□□□ -0.74
U3.28-201ENST00000391249 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
U3.28-201ENST00000391249 RABGEF1Q9UJ41 708 aa10.4□□□□□ -0.74
U3.28-201ENST00000391249 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
U3.28-201ENST00000391249 OSBPP22059 807 aa10.39□□□□□ -0.75
U3.28-201ENST00000391249 TSR1Q2NL82 804 aaKnown RBP10.39□□□□□ -0.75
U3.28-201ENST00000391249 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
U3.28-201ENST00000391249 KCTD12Q96CX2 325 aaKnown RBP10.38□□□□□ -0.75
U3.28-201ENST00000391249 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
U3.28-201ENST00000391249 MAP3K7O43318 606 aa10.37□□□□□ -0.75
U3.28-201ENST00000391249 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
U3.28-201ENST00000391249 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
U3.28-201ENST00000391249 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
U3.28-201ENST00000391249 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
U3.28-201ENST00000391249 MLLT3P42568 568 aaPredicted RBP10.31□□□□□ -0.76
U3.28-201ENST00000391249 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
U3.28-201ENST00000391249 WNT2BQ93097 391 aa10.31□□□□□ -0.76
U3.28-201ENST00000391249 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
U3.28-201ENST00000391249 GOLGA8CPA6NN73 597 aa10.3□□□□□ -0.76
U3.28-201ENST00000391249 HAP1P54257 671 aaPredicted RBP10.3□□□□□ -0.76
U3.28-201ENST00000391249 THSD4Q6ZMP0 1018 aa10.3□□□□□ -0.76
U3.28-201ENST00000391249 LAPTM4BQ86VI4 370 aa10.3□□□□□ -0.76
U3.28-201ENST00000391249 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
U3.28-201ENST00000391249 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
U3.28-201ENST00000391249 PRSS12P56730 875 aa10.28□□□□□ -0.76
U3.28-201ENST00000391249 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
U3.28-201ENST00000391249 PTPN5P54829 565 aa10.27□□□□□ -0.77
U3.28-201ENST00000391249 NPDC1Q9NQX5 325 aaPredicted RBP10.27□□□□□ -0.77
U3.28-201ENST00000391249 FAM198AQ9UFP1 575 aa10.27□□□□□ -0.77
U3.28-201ENST00000391249 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
U3.28-201ENST00000391249 ZFRQ96KR1 1074 aaKnown RBP10.26□□□□□ -0.77
U3.28-201ENST00000391249 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
U3.28-201ENST00000391249 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
U3.28-201ENST00000391249 SEMA3EO15041 775 aa10.24□□□□□ -0.77
U3.28-201ENST00000391249 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
U3.28-201ENST00000391249 C3orf80F5H4A9 247 aa10.23□□□□□ -0.77
U3.28-201ENST00000391249 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
U3.28-201ENST00000391249 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
U3.28-201ENST00000391249 PLA2G2EQ9NZK7 142 aa10.22□□□□□ -0.77
U3.28-201ENST00000391249 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
U3.28-201ENST00000391249 BCAMP50895 628 aa10.21□□□□□ -0.77
U3.28-201ENST00000391249 TTC13Q8NBP0 860 aa10.21□□□□□ -0.77
U3.28-201ENST00000391249 SMAPO00193 183 aa10.19□□□□□ -0.78
U3.28-201ENST00000391249 TATDN2Q93075 761 aa10.19□□□□□ -0.78
U3.28-201ENST00000391249 PTGDRQ13258 359 aa10.17□□□□□ -0.78
U3.28-201ENST00000391249 PADI6Q6TGC4 694 aa10.17□□□□□ -0.78
U3.28-201ENST00000391249 TESPA1A2RU30 521 aaPredicted RBP10.16□□□□□ -0.78
U3.28-201ENST00000391249 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
U3.28-201ENST00000391249 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
U3.28-201ENST00000391249 PNMA3Q9UL41 463 aa10.16□□□□□ -0.78
U3.28-201ENST00000391249 NUDT18Q6ZVK8 323 aa10.15□□□□□ -0.78
U3.28-201ENST00000391249 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
U3.28-201ENST00000391249 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
U3.28-201ENST00000391249 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
U3.28-201ENST00000391249 IFFO2Q5TF58 517 aa10.12□□□□□ -0.79
U3.28-201ENST00000391249 NYAP1Q6ZVC0 841 aa10.12□□□□□ -0.79
U3.28-201ENST00000391249 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
U3.28-201ENST00000391249 TSR3Q9UJK0 312 aaKnown RBP10.12□□□□□ -0.79
U3.28-201ENST00000391249 NUTM2FA1L443 756 aa10.11□□□□□ -0.79
U3.28-201ENST00000391249 EYA1Q99502 592 aa10.11□□□□□ -0.79
U3.28-201ENST00000391249 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
U3.28-201ENST00000391249 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
U3.28-201ENST00000391249 RBM26Q5T8P6 1007 aaKnown RBP10.09□□□□□ -0.79
U3.28-201ENST00000391249 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
U3.28-201ENST00000391249 FCHSD2O94868 740 aa10.07□□□□□ -0.8
U3.28-201ENST00000391249 ITGBL1O95965 494 aaPredicted RBP10.07□□□□□ -0.8
U3.28-201ENST00000391249 PPP4CP60510 307 aa10.06□□□□□ -0.8
U3.28-201ENST00000391249 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
U3.28-201ENST00000391249 HDGFP51858 240 aaKnown RBP10.03□□□□□ -0.8
U3.28-201ENST00000391249 SWT1Q5T5J6 900 aaKnown RBP10.03□□□□□ -0.8
U3.28-201ENST00000391249 GPR37O15354 613 aa10.02□□□□□ -0.81
U3.28-201ENST00000391249 FAM161AQ3B820 660 aa10.02□□□□□ -0.81
U3.28-201ENST00000391249 HIC1Q14526 733 aa10.01□□□□□ -0.81
U3.28-201ENST00000391249 RBM46Q8TBY0 533 aaKnown RBP10□□□□□ -0.81
U3.28-201ENST00000391249 A0A0G2JS52 829 aa9.99□□□□□ -0.81
U3.28-201ENST00000391249 FECHP22830 423 aa9.98□□□□□ -0.81
U3.28-201ENST00000391249 DNAJB2P25686 324 aa9.98□□□□□ -0.81
U3.28-201ENST00000391249 SLF2Q8IX21 1173 aa9.98□□□□□ -0.81
U3.28-201ENST00000391249 RCCD1A6NED2 376 aa9.97□□□□□ -0.81
U3.28-201ENST00000391249 GNPATO15228 680 aa9.97□□□□□ -0.81
U3.28-201ENST00000391249 RNF40O75150 1001 aa9.97□□□□□ -0.81
U3.28-201ENST00000391249 APLP1P51693 650 aa9.97□□□□□ -0.81
U3.28-201ENST00000391249 KCNC4Q03721 635 aa9.97□□□□□ -0.81
U3.28-201ENST00000391249 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
U3.28-201ENST00000391249 TJAP1Q5JTD0 557 aa9.96□□□□□ -0.82
U3.28-201ENST00000391249 PXYLP1Q8TE99 480 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms