RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 TMF1P82094 1093 aa24.88■■□□□ 1.57
PPFIA1-202ENST00000389547 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
PPFIA1-202ENST00000389547 TNNT2P45379 298 aaPredicted RBP24.86■■□□□ 1.57
PPFIA1-202ENST00000389547 POGKQ9P215 609 aa24.86■■□□□ 1.57
PPFIA1-202ENST00000389547 SAMD9Q5K651 1589 aa24.86■■□□□ 1.57
PPFIA1-202ENST00000389547 ROCK1Q13464 1354 aa24.82■■□□□ 1.56
PPFIA1-202ENST00000389547 CDCA8Q53HL2 280 aa24.82■■□□□ 1.56
PPFIA1-202ENST00000389547 KIF14Q15058 1648 aa24.81■■□□□ 1.56
PPFIA1-202ENST00000389547 PAK3O75914 559 aaPredicted RBP24.81■■□□□ 1.56
PPFIA1-202ENST00000389547 PLEKHG5O94827 1062 aa24.8■■□□□ 1.56
PPFIA1-202ENST00000389547 WDR43Q15061 677 aaKnown RBP eCLIP24.8■■□□□ 1.56
PPFIA1-202ENST00000389547 MAGI3Q5TCQ9 1506 aa24.8■■□□□ 1.56
PPFIA1-202ENST00000389547 AKNAQ7Z591 1439 aa24.79■■□□□ 1.56
PPFIA1-202ENST00000389547 USP47Q96K76 1375 aa24.79■■□□□ 1.56
PPFIA1-202ENST00000389547 CFAP43Q8NDM7 1665 aa24.79■■□□□ 1.56
PPFIA1-202ENST00000389547 TRAK1Q9UPV9 953 aa24.78■■□□□ 1.56
PPFIA1-202ENST00000389547 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
PPFIA1-202ENST00000389547 KIAA1107Q9UPP5 1409 aa24.76■■□□□ 1.55
PPFIA1-202ENST00000389547 CCDC141Q6ZP82 1450 aa24.76■■□□□ 1.55
PPFIA1-202ENST00000389547 NBPF1Q3BBV0 1214 aa24.75■■□□□ 1.55
PPFIA1-202ENST00000389547 CD109Q6YHK3 1445 aa24.72■■□□□ 1.55
PPFIA1-202ENST00000389547 SRPK2P78362 688 aaKnown RBP24.71■■□□□ 1.55
PPFIA1-202ENST00000389547 DDRGK1Q96HY6 314 aa24.71■■□□□ 1.55
PPFIA1-202ENST00000389547 PLEKHH2Q8IVE3 1493 aa24.71■■□□□ 1.55
PPFIA1-202ENST00000389547 WASHC2AQ641Q2 1341 aa24.7■■□□□ 1.54
PPFIA1-202ENST00000389547 ANKRD30BQ9BXX2 1392 aa24.7■■□□□ 1.54
PPFIA1-202ENST00000389547 NAP1L5Q96NT1 182 aaPredicted RBP24.69■■□□□ 1.54
PPFIA1-202ENST00000389547 SLC24A1O60721 1099 aa24.66■■□□□ 1.54
PPFIA1-202ENST00000389547 KIF7Q2M1P5 1343 aa24.66■■□□□ 1.54
PPFIA1-202ENST00000389547 MAPKBP1O60336 1514 aa24.65■■□□□ 1.54
PPFIA1-202ENST00000389547 ASXL2Q76L83 1435 aa24.64■■□□□ 1.54
PPFIA1-202ENST00000389547 ADGRL1O94910 1474 aa24.63■■□□□ 1.53
PPFIA1-202ENST00000389547 C14orf37Q86TY3 774 aa24.63■■□□□ 1.53
PPFIA1-202ENST00000389547 NEUROD2Q15784 382 aa24.62■■□□□ 1.53
PPFIA1-202ENST00000389547 CFAP70Q5T0N1 1121 aa24.62■■□□□ 1.53
PPFIA1-202ENST00000389547 TMEM132EQ6IEE7 984 aa24.62■■□□□ 1.53
PPFIA1-202ENST00000389547 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
PPFIA1-202ENST00000389547 FANCAO15360 1455 aa24.62■■□□□ 1.53
PPFIA1-202ENST00000389547 PRKRIP1Q9H875 184 aaPredicted RBP24.6■■□□□ 1.53
PPFIA1-202ENST00000389547 PANK3Q9H999 370 aa24.59■■□□□ 1.53
PPFIA1-202ENST00000389547 PLCH2O75038 1416 aa24.59■■□□□ 1.53
PPFIA1-202ENST00000389547 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.52
PPFIA1-202ENST00000389547 CCDC7Q96M83 1385 aa24.57■■□□□ 1.52
PPFIA1-202ENST00000389547 TRAPPC8Q9Y2L5 1435 aa24.56■■□□□ 1.52
PPFIA1-202ENST00000389547 SYCP2Q9BX26 1530 aa24.56■■□□□ 1.52
PPFIA1-202ENST00000389547 VGFO15240 615 aaPredicted RBP24.55■■□□□ 1.52
PPFIA1-202ENST00000389547 NUTM2FA1L443 756 aa24.54■■□□□ 1.52
PPFIA1-202ENST00000389547 C11orf95C9JLR9 678 aaPredicted RBP24.54■■□□□ 1.52
PPFIA1-202ENST00000389547 BRPF3Q9ULD4 1205 aa24.54■■□□□ 1.52
PPFIA1-202ENST00000389547 ABCC2Q92887 1545 aa24.54■■□□□ 1.52
PPFIA1-202ENST00000389547 VSIG10Q8N0Z9 540 aa24.53■■□□□ 1.52
PPFIA1-202ENST00000389547 ERCC6L2Q5T890 1561 aa24.53■■□□□ 1.52
PPFIA1-202ENST00000389547 KTN1Q86UP2 1357 aaKnown RBP24.52■■□□□ 1.52
PPFIA1-202ENST00000389547 SOX12O15370 315 aa24.52■■□□□ 1.52
PPFIA1-202ENST00000389547 HDGFP51858 240 aaKnown RBP24.52■■□□□ 1.52
PPFIA1-202ENST00000389547 USP35Q9P2H5 1018 aa24.51■■□□□ 1.51
PPFIA1-202ENST00000389547 ZBTB7CA1YPR0 619 aa24.5■■□□□ 1.51
PPFIA1-202ENST00000389547 MORC1Q86VD1 984 aa24.5■■□□□ 1.51
PPFIA1-202ENST00000389547 CHD1O14646 1710 aa24.5■■□□□ 1.51
PPFIA1-202ENST00000389547 WDR7Q9Y4E6 1490 aa24.49■■□□□ 1.51
PPFIA1-202ENST00000389547 GSE1Q14687 1217 aa24.48■■□□□ 1.51
PPFIA1-202ENST00000389547 MINK1Q8N4C8 1332 aaPredicted RBP24.45■■□□□ 1.51
PPFIA1-202ENST00000389547 EIF3AQ14152 1382 aaKnown RBP24.45■■□□□ 1.51
PPFIA1-202ENST00000389547 U2SURPO15042 1029 aaKnown RBP24.44■■□□□ 1.5
PPFIA1-202ENST00000389547 PKNOX2Q96KN3 472 aa24.44■■□□□ 1.5
PPFIA1-202ENST00000389547 RSPH6AQ9H0K4 717 aa24.44■■□□□ 1.5
PPFIA1-202ENST00000389547 CFAP53Q96M91 514 aa24.44■■□□□ 1.5
PPFIA1-202ENST00000389547 ITSN2Q9NZM3 1697 aa24.43■■□□□ 1.5
PPFIA1-202ENST00000389547 RPRD2Q5VT52 1461 aaKnown RBP24.43■■□□□ 1.5
PPFIA1-202ENST00000389547 RALBP1Q15311 655 aa24.43■■□□□ 1.5
PPFIA1-202ENST00000389547 SLC4A3P48751 1232 aa24.43■■□□□ 1.5
PPFIA1-202ENST00000389547 ABCA8O94911 1581 aa24.41■■□□□ 1.5
PPFIA1-202ENST00000389547 UBE2Q2Q8WVN8 375 aa24.4■■□□□ 1.5
PPFIA1-202ENST00000389547 LMOD2Q6P5Q4 547 aa24.4■■□□□ 1.5
PPFIA1-202ENST00000389547 TCERG1O14776 1098 aaKnown RBP24.4■■□□□ 1.5
PPFIA1-202ENST00000389547 FBXO31Q5XUX0 539 aaPredicted RBP24.39■■□□□ 1.5
PPFIA1-202ENST00000389547 NLRP13Q86W25 1043 aa24.38■■□□□ 1.49
PPFIA1-202ENST00000389547 RGS3P49796 1198 aa24.37■■□□□ 1.49
PPFIA1-202ENST00000389547 CCDC184Q52MB2 194 aa24.37■■□□□ 1.49
PPFIA1-202ENST00000389547 DHX29Q7Z478 1369 aaKnown RBP24.36■■□□□ 1.49
PPFIA1-202ENST00000389547 PDE4AP27815 886 aa24.36■■□□□ 1.49
PPFIA1-202ENST00000389547 EID1Q9Y6B2 187 aa24.36■■□□□ 1.49
PPFIA1-202ENST00000389547 CENPJQ9HC77 1338 aaPredicted RBP24.35■■□□□ 1.49
PPFIA1-202ENST00000389547 DNMT1P26358 1616 aaKnown RBP24.34■■□□□ 1.49
PPFIA1-202ENST00000389547 HSP90AA1P07900 732 aaKnown RBP24.34■■□□□ 1.49
PPFIA1-202ENST00000389547 UPF2Q9HAU5 1272 aaKnown RBP24.34■■□□□ 1.49
PPFIA1-202ENST00000389547 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
PPFIA1-202ENST00000389547 DENND4BO75064 1496 aaPredicted RBP24.33■■□□□ 1.49
PPFIA1-202ENST00000389547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.33■■□□□ 1.497e-6■■■■□ 19.6
PPFIA1-202ENST00000389547 ABCC10Q5T3U5 1492 aa24.33■■□□□ 1.49
PPFIA1-202ENST00000389547 PNNQ9H307 717 aaKnown RBP24.33■■□□□ 1.48
PPFIA1-202ENST00000389547 NUDCQ9Y266 331 aa24.33■■□□□ 1.48
PPFIA1-202ENST00000389547 ERBINQ96RT1 1412 aa24.32■■□□□ 1.48
PPFIA1-202ENST00000389547 TRIM44Q96DX7 344 aaPredicted RBP24.32■■□□□ 1.48
PPFIA1-202ENST00000389547 HDGFL2Q7Z4V5 671 aaPredicted RBP24.31■■□□□ 1.48
PPFIA1-202ENST00000389547 CCDC146Q8IYE0 955 aa24.31■■□□□ 1.48
PPFIA1-202ENST00000389547 IDI1Q13907 227 aa24.31■■□□□ 1.48
PPFIA1-202ENST00000389547 STAC3Q96MF2 364 aa24.3■■□□□ 1.48
PPFIA1-202ENST00000389547 ADGRF5Q8IZF2 1346 aa24.3■■□□□ 1.48
PPFIA1-202ENST00000389547 ANP32BQ92688 251 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms