RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 SLC4A5Q9BY07 1137 aa6.02□□□□□ -1.45
RNU6-541P-201ENST00000384709 HCSTQ9UBK5 93 aa6.02□□□□□ -1.45
RNU6-541P-201ENST00000384709 ARHGAP33O14559 1287 aa6.01□□□□□ -1.45
RNU6-541P-201ENST00000384709 SEMA3EO15041 775 aa6.01□□□□□ -1.45
RNU6-541P-201ENST00000384709 RGS20O76081 388 aa6.01□□□□□ -1.45
RNU6-541P-201ENST00000384709 ADAM33Q9BZ11 813 aa6.01□□□□□ -1.45
RNU6-541P-201ENST00000384709 MLLT3P42568 568 aaPredicted RBP6□□□□□ -1.45
RNU6-541P-201ENST00000384709 PRIM1P49642 420 aaKnown RBP6□□□□□ -1.45
RNU6-541P-201ENST00000384709 Q6ZNB5 142 aa6□□□□□ -1.45
RNU6-541P-201ENST00000384709 DDX12PQ92771 950 aa6□□□□□ -1.45
RNU6-541P-201ENST00000384709 TK2O00142 265 aa5.99□□□□□ -1.45
RNU6-541P-201ENST00000384709 ONECUT3O60422 494 aaPredicted RBP5.98□□□□□ -1.45
RNU6-541P-201ENST00000384709 NBR1Q14596 966 aa5.98□□□□□ -1.45
RNU6-541P-201ENST00000384709 C6orf132Q5T0Z8 1188 aa5.98□□□□□ -1.45
RNU6-541P-201ENST00000384709 GRXCR2A6NFK2 248 aa5.97□□□□□ -1.45
RNU6-541P-201ENST00000384709 PPP1R3GB7ZBB8 358 aa5.97□□□□□ -1.45
RNU6-541P-201ENST00000384709 PTPREP23469 700 aa5.97□□□□□ -1.45
RNU6-541P-201ENST00000384709 SMYD5Q6GMV2 418 aa5.97□□□□□ -1.45
RNU6-541P-201ENST00000384709 LSM11P83369 360 aaKnown RBP eCLIP5.96□□□□□ -1.46
RNU6-541P-201ENST00000384709 DMRTA1Q5VZB9 504 aa5.96□□□□□ -1.46
RNU6-541P-201ENST00000384709 CERKQ8TCT0 537 aa5.96□□□□□ -1.46
RNU6-541P-201ENST00000384709 ZBED2Q9BTP6 218 aa5.96□□□□□ -1.46
RNU6-541P-201ENST00000384709 NPDC1Q9NQX5 325 aaPredicted RBP5.96□□□□□ -1.46
RNU6-541P-201ENST00000384709 HRO43593 1189 aa5.95□□□□□ -1.46
RNU6-541P-201ENST00000384709 PSEN2P49810 448 aa5.95□□□□□ -1.46
RNU6-541P-201ENST00000384709 RBM27Q9P2N5 1060 aaKnown RBP5.95□□□□□ -1.46
RNU6-541P-201ENST00000384709 COL9A1P20849 921 aa5.94□□□□□ -1.46
RNU6-541P-201ENST00000384709 TTC13Q8NBP0 860 aa5.94□□□□□ -1.46
RNU6-541P-201ENST00000384709 AXIN2Q9Y2T1 843 aa5.94□□□□□ -1.46
RNU6-541P-201ENST00000384709 BHMG1C9JSJ3 638 aaPredicted RBP5.93□□□□□ -1.46
RNU6-541P-201ENST00000384709 GPR37O15354 613 aa5.93□□□□□ -1.46
RNU6-541P-201ENST00000384709 TSR1Q2NL82 804 aaKnown RBP5.93□□□□□ -1.46
RNU6-541P-201ENST00000384709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.93□□□□□ -1.46
RNU6-541P-201ENST00000384709 KCNH8Q96L42 1107 aa5.93□□□□□ -1.46
RNU6-541P-201ENST00000384709 KCNK17Q96T54 332 aa5.93□□□□□ -1.46
RNU6-541P-201ENST00000384709 VPS9D1Q9Y2B5 631 aa5.93□□□□□ -1.46
RNU6-541P-201ENST00000384709 MAP3K7O43318 606 aa5.92□□□□□ -1.46
RNU6-541P-201ENST00000384709 PTGDRQ13258 359 aa5.92□□□□□ -1.46
RNU6-541P-201ENST00000384709 ADGRD1Q6QNK2 874 aa5.92□□□□□ -1.46
RNU6-541P-201ENST00000384709 CDHR5Q9HBB8 845 aa5.92□□□□□ -1.46
RNU6-541P-201ENST00000384709 RBM33Q96EV2 1170 aaKnown RBP5.91□□□□□ -1.46
RNU6-541P-201ENST00000384709 TRIM6-TRIM34B2RNG4 842 aa5.9□□□□□ -1.46
RNU6-541P-201ENST00000384709 RABGEF1Q9UJ41 708 aa5.9□□□□□ -1.46
RNU6-541P-201ENST00000384709 PRSS12P56730 875 aa5.89□□□□□ -1.47
RNU6-541P-201ENST00000384709 RBM26Q5T8P6 1007 aaKnown RBP5.89□□□□□ -1.47
RNU6-541P-201ENST00000384709 BCANQ96GW7 911 aa5.89□□□□□ -1.47
RNU6-541P-201ENST00000384709 LCE2BO14633 110 aa5.88□□□□□ -1.47
RNU6-541P-201ENST00000384709 FCHSD2O94868 740 aa5.88□□□□□ -1.47
RNU6-541P-201ENST00000384709 HIC1Q14526 733 aa5.88□□□□□ -1.47
RNU6-541P-201ENST00000384709 CDCA7LQ96GN5 454 aa5.88□□□□□ -1.47
RNU6-541P-201ENST00000384709 FAM198AQ9UFP1 575 aa5.88□□□□□ -1.47
RNU6-541P-201ENST00000384709 TSKSQ9UJT2 592 aa5.88□□□□□ -1.47
RNU6-541P-201ENST00000384709 TULP1O00294 542 aaPredicted RBP5.87□□□□□ -1.47
RNU6-541P-201ENST00000384709 PROX2Q3B8N5 592 aa5.87□□□□□ -1.47
RNU6-541P-201ENST00000384709 LAPTM4BQ86VI4 370 aa5.87□□□□□ -1.47
RNU6-541P-201ENST00000384709 LMOD2Q6P5Q4 547 aa5.86□□□□□ -1.47
RNU6-541P-201ENST00000384709 GNPATO15228 680 aa5.85□□□□□ -1.47
RNU6-541P-201ENST00000384709 GPIHBP1Q8IV16 184 aa5.85□□□□□ -1.47
RNU6-541P-201ENST00000384709 NUTM2FA1L443 756 aa5.84□□□□□ -1.47
RNU6-541P-201ENST00000384709 C3orf80F5H4A9 247 aa5.84□□□□□ -1.47
RNU6-541P-201ENST00000384709 PADI6Q6TGC4 694 aa5.84□□□□□ -1.47
RNU6-541P-201ENST00000384709 PACS2Q86VP3 889 aa5.84□□□□□ -1.47
RNU6-541P-201ENST00000384709 KIAA1468Q9P260 1216 aa5.84□□□□□ -1.47
RNU6-541P-201ENST00000384709 TATDN2Q93075 761 aa5.83□□□□□ -1.48
RNU6-541P-201ENST00000384709 EYA1Q99502 592 aa5.83□□□□□ -1.48
RNU6-541P-201ENST00000384709 NBPF3Q9H094 633 aa5.83□□□□□ -1.48
RNU6-541P-201ENST00000384709 NBPF26B4DH59 902 aa5.82□□□□□ -1.48
RNU6-541P-201ENST00000384709 ZMYND10O75800 440 aa5.82□□□□□ -1.48
RNU6-541P-201ENST00000384709 TRAF7Q6Q0C0 670 aa5.82□□□□□ -1.48
RNU6-541P-201ENST00000384709 ZNF775Q96BV0 537 aaPredicted RBP5.82□□□□□ -1.48
RNU6-541P-201ENST00000384709 ADGRG1Q9Y653 693 aa5.82□□□□□ -1.48
RNU6-541P-201ENST00000384709 FECHP22830 423 aa5.81□□□□□ -1.48
RNU6-541P-201ENST00000384709 FAM98CQ17RN3 349 aaKnown RBP5.81□□□□□ -1.48
RNU6-541P-201ENST00000384709 BARGINQ6ZT62 677 aa5.81□□□□□ -1.48
RNU6-541P-201ENST00000384709 ZC3H15Q8WU90 426 aaKnown RBP5.81□□□□□ -1.48
RNU6-541P-201ENST00000384709 MAP2K5Q13163 448 aa5.8□□□□□ -1.48
RNU6-541P-201ENST00000384709 MRPL50Q8N5N7 158 aaKnown RBP5.8□□□□□ -1.48
RNU6-541P-201ENST00000384709 PNMA3Q9UL41 463 aa5.8□□□□□ -1.48
RNU6-541P-201ENST00000384709 MINK1Q8N4C8 1332 aaPredicted RBP5.79□□□□□ -1.48
RNU6-541P-201ENST00000384709 NUDT18Q6ZVK8 323 aa5.79□□□□□ -1.48
RNU6-541P-201ENST00000384709 PXYLP1Q8TE99 480 aa5.79□□□□□ -1.48
RNU6-541P-201ENST00000384709 A0A0G2JS52 829 aa5.78□□□□□ -1.48
RNU6-541P-201ENST00000384709 OATP04181 439 aa5.78□□□□□ -1.48
RNU6-541P-201ENST00000384709 ZFRQ96KR1 1074 aaKnown RBP5.78□□□□□ -1.48
RNU6-541P-201ENST00000384709 IRF6O14896 467 aa5.77□□□□□ -1.49
RNU6-541P-201ENST00000384709 IFFO2Q5TF58 517 aa5.77□□□□□ -1.49
RNU6-541P-201ENST00000384709 METTL3Q86U44 580 aaKnown RBP5.77□□□□□ -1.49
RNU6-541P-201ENST00000384709 RBM46Q8TBY0 533 aaKnown RBP5.77□□□□□ -1.49
RNU6-541P-201ENST00000384709 SEPT9Q9UHD8 586 aaPredicted RBP5.77□□□□□ -1.49
RNU6-541P-201ENST00000384709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.76□□□□□ -1.49
RNU6-541P-201ENST00000384709 SOWAHBA6NEL2 793 aa5.76□□□□□ -1.49
RNU6-541P-201ENST00000384709 DNAJB2P25686 324 aa5.76□□□□□ -1.49
RNU6-541P-201ENST00000384709 THSD4Q6ZMP0 1018 aa5.76□□□□□ -1.49
RNU6-541P-201ENST00000384709 STAC3Q96MF2 364 aa5.76□□□□□ -1.49
RNU6-541P-201ENST00000384709 SMAPO00193 183 aa5.75□□□□□ -1.49
RNU6-541P-201ENST00000384709 TMEM134Q9H6X4 195 aa5.75□□□□□ -1.49
RNU6-541P-201ENST00000384709 RCCD1A6NED2 376 aa5.74□□□□□ -1.49
RNU6-541P-201ENST00000384709 ANKK1Q8NFD2 765 aa5.74□□□□□ -1.49
RNU6-541P-201ENST00000384709 WNT2BQ93097 391 aa5.74□□□□□ -1.49
RNU6-541P-201ENST00000384709 TMUB1Q9BVT8 246 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms