RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 KANK1Q14678 1352 aa26.49■■□□□ 1.83
CD9-202ENST00000382515 SIGLEC1Q9BZZ2 1709 aa26.49■■□□□ 1.83
CD9-202ENST00000382515 FAM135AQ9P2D6 1515 aa26.49■■□□□ 1.83
CD9-202ENST00000382515 NAIPQ13075 1403 aa26.48■■□□□ 1.83
CD9-202ENST00000382515 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
CD9-202ENST00000382515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.45■■□□□ 1.82
CD9-202ENST00000382515 ZMYM3Q14202 1370 aa26.45■■□□□ 1.82
CD9-202ENST00000382515 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
CD9-202ENST00000382515 PTPRMP28827 1452 aa26.43■■□□□ 1.82
CD9-202ENST00000382515 HRCP23327 699 aa26.42■■□□□ 1.82
CD9-202ENST00000382515 KDM5DQ9BY66 1539 aa26.39■■□□□ 1.82
CD9-202ENST00000382515 RNF17Q9BXT8 1623 aaKnown RBP26.39■■□□□ 1.82
CD9-202ENST00000382515 MADDQ8WXG6 1647 aa26.39■■□□□ 1.81
CD9-202ENST00000382515 SETD5Q9C0A6 1442 aa26.36■■□□□ 1.81
CD9-202ENST00000382515 NUP155O75694 1391 aa26.35■■□□□ 1.81
CD9-202ENST00000382515 CEBPAP49715 358 aaPredicted RBP26.35■■□□□ 1.81
CD9-202ENST00000382515 PRDM15P57071 1507 aaPredicted RBP26.34■■□□□ 1.81
CD9-202ENST00000382515 ARHGAP31Q2M1Z3 1444 aa26.32■■□□□ 1.8
CD9-202ENST00000382515 DEPDC5O75140 1603 aa26.31■■□□□ 1.8
CD9-202ENST00000382515 NPATQ14207 1427 aa26.31■■□□□ 1.8
CD9-202ENST00000382515 FER1L4A9Z1Z3 1794 aa26.3■■□□□ 1.8
CD9-202ENST00000382515 ABCC3O15438 1527 aa26.3■■□□□ 1.8
CD9-202ENST00000382515 LMTK2Q8IWU2 1503 aa26.3■■□□□ 1.8
CD9-202ENST00000382515 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
CD9-202ENST00000382515 MROH1Q8NDA8 1641 aa26.29■■□□□ 1.8
CD9-202ENST00000382515 VWDEQ8N2E2 1590 aa26.28■■□□□ 1.8
CD9-202ENST00000382515 RIMS1Q86UR5 1692 aaKnown RBP26.28■■□□□ 1.8
CD9-202ENST00000382515 MROH2AA6NES4 1674 aa26.27■■□□□ 1.8
CD9-202ENST00000382515 PZPP20742 1482 aa26.26■■□□□ 1.79
CD9-202ENST00000382515 PLPPR3Q6T4P5 718 aa26.26■■□□□ 1.79
CD9-202ENST00000382515 ZC3H13Q5T200 1668 aaKnown RBP26.25■■□□□ 1.79
CD9-202ENST00000382515 GCC2Q8IWJ2 1684 aa26.24■■□□□ 1.79
CD9-202ENST00000382515 FBXO31Q5XUX0 539 aaPredicted RBP26.23■■□□□ 1.79
CD9-202ENST00000382515 UNC13BO14795 1591 aa26.23■■□□□ 1.79
CD9-202ENST00000382515 RAB3GAP2Q9H2M9 1393 aa26.22■■□□□ 1.79
CD9-202ENST00000382515 CLTCQ00610 1675 aaKnown RBP26.22■■□□□ 1.79
CD9-202ENST00000382515 RPRD2Q5VT52 1461 aaKnown RBP26.21■■□□□ 1.79
CD9-202ENST00000382515 SLC4A1APQ9BWU0 796 aaKnown RBP26.2■■□□□ 1.78
CD9-202ENST00000382515 SETD1BQ9UPS6 1966 aaKnown RBP26.19■■□□□ 1.78
CD9-202ENST00000382515 SLC52A1Q9NWF4 448 aa26.17■■□□□ 1.78
CD9-202ENST00000382515 TNRQ92752 1358 aa26.17■■□□□ 1.78
CD9-202ENST00000382515 MPHOSPH9Q99550 1183 aa26.16■■□□□ 1.78
CD9-202ENST00000382515 C3P01024 1663 aa26.15■■□□□ 1.78
CD9-202ENST00000382515 IQGAP3Q86VI3 1631 aa26.14■■□□□ 1.77
CD9-202ENST00000382515 UHRF1BP1Q6BDS2 1440 aa26.14■■□□□ 1.77
CD9-202ENST00000382515 PKD2Q13563 968 aa26.12■■□□□ 1.77
CD9-202ENST00000382515 EFCAB6Q5THR3 1501 aa26.12■■□□□ 1.77
CD9-202ENST00000382515 ERVK-7P63135 1459 aa26.11■■□□□ 1.77
CD9-202ENST00000382515 CAMSAP1Q5T5Y3 1602 aa26.1■■□□□ 1.77
CD9-202ENST00000382515 NOS1P29475 1434 aa26.1■■□□□ 1.77
CD9-202ENST00000382515 NLRP1Q9C000 1473 aa26.1■■□□□ 1.77
CD9-202ENST00000382515 TET3O43151 1660 aa26.09■■□□□ 1.77
CD9-202ENST00000382515 SPATA31D1Q6ZQQ2 1576 aa26.08■■□□□ 1.77
CD9-202ENST00000382515 THEMISQ8N1K5 641 aaPredicted RBP26.07■■□□□ 1.76
CD9-202ENST00000382515 CEP152O94986 1710 aa26.07■■□□□ 1.76
CD9-202ENST00000382515 IDI1Q13907 227 aa26.05■■□□□ 1.76
CD9-202ENST00000382515 PTPRTO14522 1441 aa26.04■■□□□ 1.76
CD9-202ENST00000382515 A2ML1A8K2U0 1454 aa26.01■■□□□ 1.75
CD9-202ENST00000382515 LMTK3Q96Q04 1460 aa26■■□□□ 1.75
CD9-202ENST00000382515 STAG3Q9UJ98 1225 aa26■■□□□ 1.75
CD9-202ENST00000382515 PCGF6Q9BYE7 350 aa25.99■■□□□ 1.75
CD9-202ENST00000382515 PREX1Q8TCU6 1659 aa25.96■■□□□ 1.75
CD9-202ENST00000382515 HDGFP51858 240 aaKnown RBP25.95■■□□□ 1.74
CD9-202ENST00000382515 E9PCH4 1651 aa25.93■■□□□ 1.74
CD9-202ENST00000382515 HSPA2P54652 639 aa25.93■■□□□ 1.74
CD9-202ENST00000382515 DMRT2Q9Y5R5 561 aa25.93■■□□□ 1.74
CD9-202ENST00000382515 CEP170BQ9Y4F5 1589 aaPredicted RBP25.91■■□□□ 1.74
CD9-202ENST00000382515 FOXD1Q16676 465 aa25.91■■□□□ 1.74
CD9-202ENST00000382515 ANKLE2Q86XL3 938 aa25.91■■□□□ 1.74
CD9-202ENST00000382515 UGGT1Q9NYU2 1555 aa25.9■■□□□ 1.74
CD9-202ENST00000382515 PLA2R1Q13018 1463 aa25.9■■□□□ 1.74
CD9-202ENST00000382515 MYO3AQ8NEV4 1616 aa25.88■■□□□ 1.73
CD9-202ENST00000382515 SYNMO15061 1565 aa25.88■■□□□ 1.73
CD9-202ENST00000382515 EID1Q9Y6B2 187 aa25.88■■□□□ 1.73
CD9-202ENST00000382515 CFAP65Q6ZU64 1925 aaKnown RBP25.87■■□□□ 1.73
CD9-202ENST00000382515 CHGAP10645 457 aaKnown RBP25.86■■□□□ 1.73
CD9-202ENST00000382515 TRPM2O94759 1503 aa25.86■■□□□ 1.73
CD9-202ENST00000382515 ANKRD30BQ9BXX2 1392 aa25.85■■□□□ 1.73
CD9-202ENST00000382515 CCDC144AA2RUR9 1427 aa25.85■■□□□ 1.73
CD9-202ENST00000382515 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.84■■□□□ 1.73
CD9-202ENST00000382515 ZNF142P52746 1687 aaPredicted RBP25.83■■□□□ 1.73
CD9-202ENST00000382515 TMEM2Q9UHN6 1383 aa25.83■■□□□ 1.73
CD9-202ENST00000382515 TXNDC2Q86VQ3 553 aa25.81■■□□□ 1.72
CD9-202ENST00000382515 RPGRIP1LQ68CZ1 1315 aa25.81■■□□□ 1.72
CD9-202ENST00000382515 PIK3C2BO00750 1634 aa25.8■■□□□ 1.72
CD9-202ENST00000382515 KDM5AP29375 1690 aaKnown RBP25.8■■□□□ 1.72
CD9-202ENST00000382515 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
CD9-202ENST00000382515 ARHGAP23Q9P227 1491 aa25.78■■□□□ 1.72
CD9-202ENST00000382515 ZNF326Q5BKZ1 582 aaKnown RBP25.77■■□□□ 1.72
CD9-202ENST00000382515 ADGRB3O60242 1522 aa25.77■■□□□ 1.72
CD9-202ENST00000382515 SLIT1O75093 1534 aa25.77■■□□□ 1.72
CD9-202ENST00000382515 NCKAP5LQ9HCH0 1330 aa25.76■■□□□ 1.71
CD9-202ENST00000382515 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
CD9-202ENST00000382515 LTKP29376 864 aa25.74■■□□□ 1.71
CD9-202ENST00000382515 STAC3Q96MF2 364 aa25.74■■□□□ 1.71
CD9-202ENST00000382515 VGFO15240 615 aaPredicted RBP25.73■■□□□ 1.71
CD9-202ENST00000382515 UBR1Q8IWV7 1749 aa25.72■■□□□ 1.71
CD9-202ENST00000382515 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
CD9-202ENST00000382515 PPP1R15AO75807 674 aaPredicted RBP25.71■■□□□ 1.71
CD9-202ENST00000382515 RIMS2Q9UQ26 1411 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms