RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
VLDLR-203ENST00000382100 CENPJQ9HC77 1338 aaPredicted RBP12.09□□□□□ -0.47
VLDLR-203ENST00000382100 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
VLDLR-203ENST00000382100 MBD3O95983 291 aa12.08□□□□□ -0.48
VLDLR-203ENST00000382100 NINLQ9Y2I6 1382 aa12.08□□□□□ -0.48
VLDLR-203ENST00000382100 BECN2A8MW95 431 aa12.08□□□□□ -0.48
VLDLR-203ENST00000382100 EIF3JO75822 258 aaKnown RBP12.07□□□□□ -0.48
VLDLR-203ENST00000382100 GOLGA4Q13439 2230 aaKnown RBP12.07□□□□□ -0.48
VLDLR-203ENST00000382100 NUCB2P80303 420 aa12.07□□□□□ -0.48
VLDLR-203ENST00000382100 TULP1O00294 542 aaPredicted RBP12.07□□□□□ -0.48
VLDLR-203ENST00000382100 ERLIN2O94905 339 aa12.07□□□□□ -0.48
VLDLR-203ENST00000382100 RUFY2Q8WXA3 655 aa12.06□□□□□ -0.48
VLDLR-203ENST00000382100 MCM2P49736 904 aa12.06□□□□□ -0.48
VLDLR-203ENST00000382100 GOLGA6L10A0A0M3HER8 536 aa12.06□□□□□ -0.48
VLDLR-203ENST00000382100 MCM3P25205 808 aa12.06□□□□□ -0.48
VLDLR-203ENST00000382100 RRP9O43818 475 aaKnown RBP12.06□□□□□ -0.48
VLDLR-203ENST00000382100 H0YHG0 523 aa12.06□□□□□ -0.48
VLDLR-203ENST00000382100 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
VLDLR-203ENST00000382100 SETD5Q9C0A6 1442 aa12.05□□□□□ -0.48
VLDLR-203ENST00000382100 KIF3BO15066 747 aa12.05□□□□□ -0.48
VLDLR-203ENST00000382100 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
VLDLR-203ENST00000382100 ERLIN1O75477 346 aa12.05□□□□□ -0.48
VLDLR-203ENST00000382100 LEKR1Q6ZMV7 388 aa12.05□□□□□ -0.48
VLDLR-203ENST00000382100 WASHC2AQ641Q2 1341 aa12.05□□□□□ -0.48
VLDLR-203ENST00000382100 TUBB4BP68371 445 aa12.05□□□□□ -0.48
VLDLR-203ENST00000382100 ZNF771Q7L3S4 317 aaPredicted RBP12.04□□□□□ -0.48
VLDLR-203ENST00000382100 DYDC1Q8WWB3 177 aa12.04□□□□□ -0.48
VLDLR-203ENST00000382100 GOLGA6L10A6NI86 522 aa12.04□□□□□ -0.48
VLDLR-203ENST00000382100 SPATA24Q86W54 205 aa12.04□□□□□ -0.48
VLDLR-203ENST00000382100 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
VLDLR-203ENST00000382100 FAM184AQ8NB25 1140 aa12.04□□□□□ -0.48
VLDLR-203ENST00000382100 FMN1Q68DA7 1419 aa12.04□□□□□ -0.48
VLDLR-203ENST00000382100 SH3BGRP55822 239 aaPredicted RBP12.04□□□□□ -0.48
VLDLR-203ENST00000382100 GSE1Q14687 1217 aa12.03□□□□□ -0.48
VLDLR-203ENST00000382100 CENPQQ7L2Z9 268 aaPredicted RBP12.03□□□□□ -0.48
VLDLR-203ENST00000382100 PLEKHD1A6NEE1 506 aa12.03□□□□□ -0.48
VLDLR-203ENST00000382100 FAM43AQ8N2R8 423 aa12.02□□□□□ -0.48
VLDLR-203ENST00000382100 KIAA0754O94854 1291 aa12.02□□□□□ -0.48
VLDLR-203ENST00000382100 ZNF777Q9ULD5 760 aaPredicted RBP12.02□□□□□ -0.49
VLDLR-203ENST00000382100 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
VLDLR-203ENST00000382100 CCDC39Q9UFE4 941 aa12.02□□□□□ -0.49
VLDLR-203ENST00000382100 CHMP3Q9Y3E7 222 aa12.02□□□□□ -0.49
VLDLR-203ENST00000382100 ARHGAP35Q9NRY4 1499 aa12.01□□□□□ -0.49
VLDLR-203ENST00000382100 CAVIN2O95810 425 aa12.01□□□□□ -0.49
VLDLR-203ENST00000382100 ZKSCAN1P17029 563 aaPredicted RBP12.01□□□□□ -0.49
VLDLR-203ENST00000382100 KRI1Q8N9T8 703 aaKnown RBP12.01□□□□□ -0.49
VLDLR-203ENST00000382100 CARD11Q9BXL7 1154 aa12.01□□□□□ -0.49
VLDLR-203ENST00000382100 LUZP1Q86V48 1076 aa12□□□□□ -0.49
VLDLR-203ENST00000382100 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
VLDLR-203ENST00000382100 IRX6P78412 446 aaPredicted RBP12□□□□□ -0.49
VLDLR-203ENST00000382100 DDX11Q96FC9 970 aa12□□□□□ -0.49
VLDLR-203ENST00000382100 RASSF8Q8NHQ8 419 aa11.99□□□□□ -0.49
VLDLR-203ENST00000382100 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
VLDLR-203ENST00000382100 RP1L1Q8IWN7 2480 aaPredicted RBP11.99□□□□□ -0.49
VLDLR-203ENST00000382100 GBP3Q9H0R5 595 aa11.99□□□□□ -0.49
VLDLR-203ENST00000382100 DDX12PQ92771 950 aa11.99□□□□□ -0.49
VLDLR-203ENST00000382100 CLSTN1O94985 981 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 RGS3P49796 1198 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 TPD52L1Q16890 204 aaPredicted RBP11.98□□□□□ -0.49
VLDLR-203ENST00000382100 NPHP1O15259 732 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 MRE11P49959 708 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 FYB1O15117 783 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 CTR9Q6PD62 1173 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 AMOTL1Q8IY63 956 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 CCDC7Q96M83 1385 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 CCDC112Q8NEF3 446 aa11.98□□□□□ -0.49
VLDLR-203ENST00000382100 SF3A1Q15459 793 aaKnown RBP11.97□□□□□ -0.49
VLDLR-203ENST00000382100 SETSIPP0DME0 302 aa11.97□□□□□ -0.49
VLDLR-203ENST00000382100 JMYQ8N9B5 988 aa11.97□□□□□ -0.49
VLDLR-203ENST00000382100 DNAI2Q9GZS0 605 aa11.96□□□□□ -0.49
VLDLR-203ENST00000382100 FBLN2P98095 1184 aa11.96□□□□□ -0.49
VLDLR-203ENST00000382100 AKAP17AQ02040 695 aaKnown RBP11.96□□□□□ -0.49
VLDLR-203ENST00000382100 RCAN3Q9UKA8 241 aa11.96□□□□□ -0.5
VLDLR-203ENST00000382100 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.96□□□□□ -0.5
VLDLR-203ENST00000382100 RBM19Q9Y4C8 960 aaKnown RBP11.96□□□□□ -0.5
VLDLR-203ENST00000382100 V9GYY5 206 aaPredicted RBP11.96□□□□□ -0.5
VLDLR-203ENST00000382100 MIER1Q8N108 512 aa11.96□□□□□ -0.5
VLDLR-203ENST00000382100 DESP17661 470 aa11.95□□□□□ -0.5
VLDLR-203ENST00000382100 HSP90AB4PQ58FF6 505 aa11.95□□□□□ -0.5
VLDLR-203ENST00000382100 SMARCE1Q969G3 411 aa11.95□□□□□ -0.5
VLDLR-203ENST00000382100 MFAP1P55081 439 aaKnown RBP11.95□□□□□ -0.5
VLDLR-203ENST00000382100 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
VLDLR-203ENST00000382100 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
VLDLR-203ENST00000382100 TUBB4AP04350 444 aa11.94□□□□□ -0.5
VLDLR-203ENST00000382100 CHGAP10645 457 aaKnown RBP11.94□□□□□ -0.5
VLDLR-203ENST00000382100 PPM1EQ8WY54 764 aa11.94□□□□□ -0.5
VLDLR-203ENST00000382100 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
VLDLR-203ENST00000382100 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
VLDLR-203ENST00000382100 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
VLDLR-203ENST00000382100 USH1CQ9Y6N9 552 aa11.93□□□□□ -0.5
VLDLR-203ENST00000382100 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
VLDLR-203ENST00000382100 SYNE3Q6ZMZ3 975 aa11.93□□□□□ -0.5
VLDLR-203ENST00000382100 CHMP5Q9NZZ3 219 aa11.93□□□□□ -0.5
VLDLR-203ENST00000382100 KIF15Q9NS87 1388 aa11.93□□□□□ -0.5
VLDLR-203ENST00000382100 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
VLDLR-203ENST00000382100 XBP1P17861 261 aa11.92□□□□□ -0.5
VLDLR-203ENST00000382100 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
VLDLR-203ENST00000382100 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
VLDLR-203ENST00000382100 EIF3DO15371 548 aaKnown RBP eCLIP11.92□□□□□ -0.5
VLDLR-203ENST00000382100 HDGFL2Q7Z4V5 671 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms