RNA–Protein interactions for RNA: ENST00000381989.3

PARP4-201, Transcript of poly(ADP-ribose) polymerase family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP4, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4-201ENST00000381989 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
PARP4-201ENST00000381989 CHIC2Q9UKJ5 165 aa10.78□□□□□ -0.68
PARP4-201ENST00000381989 WASHC2AQ641Q2 1341 aa10.77□□□□□ -0.68
PARP4-201ENST00000381989 HTATSF1O43719 755 aaKnown RBP10.77□□□□□ -0.69
PARP4-201ENST00000381989 CARD11Q9BXL7 1154 aa10.77□□□□□ -0.69
PARP4-201ENST00000381989 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
PARP4-201ENST00000381989 IPO8O15397 1037 aaKnown RBP10.77□□□□□ -0.69
PARP4-201ENST00000381989 GOLGA2Q08379 1002 aa10.76□□□□□ -0.69
PARP4-201ENST00000381989 FTSJ3Q8IY81 847 aaKnown RBP10.76□□□□□ -0.69
PARP4-201ENST00000381989 RRP7BPQ9NSQ0 103 aa10.76□□□□□ -0.69
PARP4-201ENST00000381989 USP35Q9P2H5 1018 aa10.76□□□□□ -0.69
PARP4-201ENST00000381989 NPHP1O15259 732 aa10.76□□□□□ -0.69
PARP4-201ENST00000381989 NGEFQ8N5V2 710 aa10.76□□□□□ -0.69
PARP4-201ENST00000381989 DDX10Q13206 875 aaKnown RBP10.76□□□□□ -0.69
PARP4-201ENST00000381989 ZNF644Q9H582 1327 aaPredicted RBP10.75□□□□□ -0.69
PARP4-201ENST00000381989 PLEKHH2Q8IVE3 1493 aa10.75□□□□□ -0.69
PARP4-201ENST00000381989 ANKRD30BQ9BXX2 1392 aa10.75□□□□□ -0.69
PARP4-201ENST00000381989 ABCA8O94911 1581 aa10.74□□□□□ -0.69
PARP4-201ENST00000381989 DAPK1P53355 1430 aa10.74□□□□□ -0.69
PARP4-201ENST00000381989 ADGBQ8N7X0 1667 aa10.74□□□□□ -0.69
PARP4-201ENST00000381989 KDM2AQ9Y2K7 1162 aa10.74□□□□□ -0.69
PARP4-201ENST00000381989 GRIN2AQ12879 1464 aa10.74□□□□□ -0.69
PARP4-201ENST00000381989 RPRD2Q5VT52 1461 aaKnown RBP10.74□□□□□ -0.69
PARP4-201ENST00000381989 PPM1GO15355 546 aaPredicted RBP10.73□□□□□ -0.69
PARP4-201ENST00000381989 NBPF8Q3BBV2 869 aa10.73□□□□□ -0.69
PARP4-201ENST00000381989 E9PCH4 1651 aa10.73□□□□□ -0.69
PARP4-201ENST00000381989 NCOA1Q15788 1441 aa10.72□□□□□ -0.69
PARP4-201ENST00000381989 TROQ12816 1431 aaPredicted RBP10.72□□□□□ -0.69
PARP4-201ENST00000381989 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
PARP4-201ENST00000381989 PLB1Q6P1J6 1458 aa10.72□□□□□ -0.69
PARP4-201ENST00000381989 ABCC10Q5T3U5 1492 aa10.71□□□□□ -0.69
PARP4-201ENST00000381989 FAM9BQ8IZU0 186 aa10.71□□□□□ -0.69
PARP4-201ENST00000381989 MPHOSPH9Q99550 1183 aa10.71□□□□□ -0.69
PARP4-201ENST00000381989 KDM5CP41229 1560 aa10.71□□□□□ -0.7
PARP4-201ENST00000381989 TERF2IPQ9NYB0 399 aa10.71□□□□□ -0.7
PARP4-201ENST00000381989 CDC42BPBQ9Y5S2 1711 aa10.7□□□□□ -0.7
PARP4-201ENST00000381989 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.7□□□□□ -0.7
PARP4-201ENST00000381989 GPATCH8Q9UKJ3 1502 aaKnown RBP10.7□□□□□ -0.7
PARP4-201ENST00000381989 RALBP1Q15311 655 aa10.7□□□□□ -0.7
PARP4-201ENST00000381989 SPAG9O60271 1321 aaKnown RBP10.69□□□□□ -0.7
PARP4-201ENST00000381989 ADGRL2O95490 1459 aa10.69□□□□□ -0.7
PARP4-201ENST00000381989 PRG4Q92954 1404 aaPredicted RBP10.69□□□□□ -0.7
PARP4-201ENST00000381989 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
PARP4-201ENST00000381989 TRHP20396 242 aaPredicted RBP10.68□□□□□ -0.7
PARP4-201ENST00000381989 CHAF1AQ13111 956 aaPredicted RBP10.68□□□□□ -0.7
PARP4-201ENST00000381989 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
PARP4-201ENST00000381989 NUP160Q12769 1436 aa10.67□□□□□ -0.7
PARP4-201ENST00000381989 SCAPERQ9BY12 1400 aa10.67□□□□□ -0.7
PARP4-201ENST00000381989 A0A0G2JS52 829 aa10.67□□□□□ -0.7
PARP4-201ENST00000381989 PLPPR3Q6T4P5 718 aa10.67□□□□□ -0.7
PARP4-201ENST00000381989 JPH4Q96JJ6 628 aa10.67□□□□□ -0.7
PARP4-201ENST00000381989 DHX29Q7Z478 1369 aaKnown RBP10.67□□□□□ -0.7
PARP4-201ENST00000381989 KTN1Q86UP2 1357 aaKnown RBP10.67□□□□□ -0.7
PARP4-201ENST00000381989 CAMSAP2Q08AD1 1489 aa10.67□□□□□ -0.7
PARP4-201ENST00000381989 PTPRGP23470 1445 aa10.66□□□□□ -0.7
PARP4-201ENST00000381989 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
PARP4-201ENST00000381989 TRIM44Q96DX7 344 aaPredicted RBP10.66□□□□□ -0.7
PARP4-201ENST00000381989 CSPP1Q1MSJ5 1256 aa10.65□□□□□ -0.7
PARP4-201ENST00000381989 ZBTB7CA1YPR0 619 aa10.65□□□□□ -0.7
PARP4-201ENST00000381989 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
PARP4-201ENST00000381989 KIF3AQ9Y496 699 aa10.65□□□□□ -0.71
PARP4-201ENST00000381989 KDM5DQ9BY66 1539 aa10.64□□□□□ -0.71
PARP4-201ENST00000381989 HMMRO75330 724 aa10.64□□□□□ -0.71
PARP4-201ENST00000381989 MORC1Q86VD1 984 aa10.63□□□□□ -0.71
PARP4-201ENST00000381989 HSP90B1P14625 803 aaKnown RBP10.62□□□□□ -0.71
PARP4-201ENST00000381989 FKBP8Q14318 412 aa10.62□□□□□ -0.71
PARP4-201ENST00000381989 L3MBTL2Q969R5 705 aa10.62□□□□□ -0.71
PARP4-201ENST00000381989 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
PARP4-201ENST00000381989 SAMD9LQ8IVG5 1584 aa10.62□□□□□ -0.71
PARP4-201ENST00000381989 FGD1P98174 961 aa10.62□□□□□ -0.71
PARP4-201ENST00000381989 SHANK2Q9UPX8 1470 aa10.62□□□□□ -0.71
PARP4-201ENST00000381989 HSPA5P11021 654 aaKnown RBP10.61□□□□□ -0.71
PARP4-201ENST00000381989 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
PARP4-201ENST00000381989 ERCC6L2Q5T890 1561 aa10.61□□□□□ -0.71
PARP4-201ENST00000381989 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
PARP4-201ENST00000381989 CNTLNQ9NXG0 1405 aa10.61□□□□□ -0.71
PARP4-201ENST00000381989 SRPK2P78362 688 aaKnown RBP10.61□□□□□ -0.71
PARP4-201ENST00000381989 TPM4P67936 248 aa10.6□□□□□ -0.71
PARP4-201ENST00000381989 ATP10BO94823 1461 aa10.6□□□□□ -0.71
PARP4-201ENST00000381989 MSH5O43196 834 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 PLA2R1Q13018 1463 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 KCNJ4P48050 445 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 KIAA1107Q9UPP5 1409 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 NUP155O75694 1391 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 AAMPQ13685 434 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 CCDC7Q96M83 1385 aa10.59□□□□□ -0.71
PARP4-201ENST00000381989 VGFO15240 615 aaPredicted RBP10.59□□□□□ -0.71
PARP4-201ENST00000381989 STK31Q9BXU1 1019 aa10.58□□□□□ -0.72
PARP4-201ENST00000381989 SMC4Q9NTJ3 1288 aa10.58□□□□□ -0.72
PARP4-201ENST00000381989 MYO5CQ9NQX4 1742 aa10.58□□□□□ -0.72
PARP4-201ENST00000381989 KIAA1211Q6ZU35 1233 aa10.58□□□□□ -0.72
PARP4-201ENST00000381989 OSCARQ8IYS5 282 aa10.58□□□□□ -0.72
PARP4-201ENST00000381989 TRPM1Q7Z4N2 1603 aa10.58□□□□□ -0.72
PARP4-201ENST00000381989 GOLGA6L4A6NEF3 574 aa10.58□□□□□ -0.72
PARP4-201ENST00000381989 PPP4R2Q9NY27 417 aa10.57□□□□□ -0.72
PARP4-201ENST00000381989 TTC37Q6PGP7 1564 aa10.57□□□□□ -0.72
PARP4-201ENST00000381989 PREX2Q70Z35 1606 aa10.57□□□□□ -0.72
PARP4-201ENST00000381989 SYAP1Q96A49 352 aaPredicted RBP10.57□□□□□ -0.72
PARP4-201ENST00000381989 ANKRD50Q9ULJ7 1429 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms