RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
SNRPB-201ENST00000381342 HSPA2P54652 639 aa24.65■■□□□ 1.54
SNRPB-201ENST00000381342 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
SNRPB-201ENST00000381342 RRP7BPQ9NSQ0 103 aa24.64■■□□□ 1.54
SNRPB-201ENST00000381342 ERBINQ96RT1 1412 aa24.62■■□□□ 1.53
SNRPB-201ENST00000381342 KIF3BO15066 747 aa24.62■■□□□ 1.53
SNRPB-201ENST00000381342 SETD1BQ9UPS6 1966 aaKnown RBP24.62■■□□□ 1.53
SNRPB-201ENST00000381342 UHRF1BP1Q6BDS2 1440 aa24.61■■□□□ 1.53
SNRPB-201ENST00000381342 CLTCQ00610 1675 aaKnown RBP24.6■■□□□ 1.53
SNRPB-201ENST00000381342 ZMYM3Q14202 1370 aa24.6■■□□□ 1.53
SNRPB-201ENST00000381342 MROH1Q8NDA8 1641 aa24.6■■□□□ 1.53
SNRPB-201ENST00000381342 ROCK1Q13464 1354 aa24.59■■□□□ 1.53
SNRPB-201ENST00000381342 C3P01024 1663 aa24.59■■□□□ 1.53
SNRPB-201ENST00000381342 PREX1Q8TCU6 1659 aa24.59■■□□□ 1.53
SNRPB-201ENST00000381342 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
SNRPB-201ENST00000381342 GCC2Q8IWJ2 1684 aa24.57■■□□□ 1.52
SNRPB-201ENST00000381342 MROH2AA6NES4 1674 aa24.56■■□□□ 1.52
SNRPB-201ENST00000381342 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
SNRPB-201ENST00000381342 CEP152O94986 1710 aa24.53■■□□□ 1.52
SNRPB-201ENST00000381342 KDM5DQ9BY66 1539 aa24.53■■□□□ 1.52
SNRPB-201ENST00000381342 ANKRD50Q9ULJ7 1429 aa24.52■■□□□ 1.52
SNRPB-201ENST00000381342 ZC3H13Q5T200 1668 aaKnown RBP24.52■■□□□ 1.52
SNRPB-201ENST00000381342 NPATQ14207 1427 aa24.52■■□□□ 1.52
SNRPB-201ENST00000381342 DMRT2Q9Y5R5 561 aa24.51■■□□□ 1.51
SNRPB-201ENST00000381342 WASHC2CQ9Y4E1 1318 aa24.51■■□□□ 1.51
SNRPB-201ENST00000381342 FAM135AQ9P2D6 1515 aa24.51■■□□□ 1.51
SNRPB-201ENST00000381342 UNC13BO14795 1591 aa24.47■■□□□ 1.51
SNRPB-201ENST00000381342 ABCC3O15438 1527 aa24.47■■□□□ 1.51
SNRPB-201ENST00000381342 NAIPQ13075 1403 aa24.45■■□□□ 1.51
SNRPB-201ENST00000381342 CAMSAP1Q5T5Y3 1602 aa24.45■■□□□ 1.5
SNRPB-201ENST00000381342 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
SNRPB-201ENST00000381342 VWDEQ8N2E2 1590 aa24.43■■□□□ 1.5
SNRPB-201ENST00000381342 ILDR1Q86SU0 546 aaPredicted RBP24.4■■□□□ 1.5
SNRPB-201ENST00000381342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.49
SNRPB-201ENST00000381342 KANK1Q14678 1352 aa24.37■■□□□ 1.49
SNRPB-201ENST00000381342 IQGAP3Q86VI3 1631 aa24.36■■□□□ 1.49
SNRPB-201ENST00000381342 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
SNRPB-201ENST00000381342 PZPP20742 1482 aa24.35■■□□□ 1.49
SNRPB-201ENST00000381342 TNRQ92752 1358 aa24.34■■□□□ 1.49
SNRPB-201ENST00000381342 FBXO31Q5XUX0 539 aaPredicted RBP24.34■■□□□ 1.49
SNRPB-201ENST00000381342 EFCAB6Q5THR3 1501 aa24.34■■□□□ 1.49
SNRPB-201ENST00000381342 TET3O43151 1660 aa24.34■■□□□ 1.49
SNRPB-201ENST00000381342 CFAP65Q6ZU64 1925 aaKnown RBP24.31■■□□□ 1.48
SNRPB-201ENST00000381342 MYO3AQ8NEV4 1616 aa24.31■■□□□ 1.48
SNRPB-201ENST00000381342 FBXO41Q8TF61 875 aa24.3■■□□□ 1.48
SNRPB-201ENST00000381342 STRCQ7RTU9 1775 aa24.29■■□□□ 1.48
SNRPB-201ENST00000381342 PTPRTO14522 1441 aa24.29■■□□□ 1.48
SNRPB-201ENST00000381342 CEP170BQ9Y4F5 1589 aaPredicted RBP24.29■■□□□ 1.48
SNRPB-201ENST00000381342 PKD2Q13563 968 aa24.28■■□□□ 1.48
SNRPB-201ENST00000381342 A2ML1A8K2U0 1454 aa24.27■■□□□ 1.48
SNRPB-201ENST00000381342 SPATA31D1Q6ZQQ2 1576 aa24.26■■□□□ 1.47
SNRPB-201ENST00000381342 E9PCH4 1651 aa24.26■■□□□ 1.47
SNRPB-201ENST00000381342 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
SNRPB-201ENST00000381342 NUP155O75694 1391 aa24.26■■□□□ 1.47
SNRPB-201ENST00000381342 ARHGAP31Q2M1Z3 1444 aa24.26■■□□□ 1.47
SNRPB-201ENST00000381342 ERVK-7P63135 1459 aa24.26■■□□□ 1.47
SNRPB-201ENST00000381342 THEMISQ8N1K5 641 aaPredicted RBP24.25■■□□□ 1.47
SNRPB-201ENST00000381342 CERKQ8TCT0 537 aa24.25■■□□□ 1.47
SNRPB-201ENST00000381342 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
SNRPB-201ENST00000381342 SETD5Q9C0A6 1442 aa24.24■■□□□ 1.47
SNRPB-201ENST00000381342 PLA2R1Q13018 1463 aa24.23■■□□□ 1.47
SNRPB-201ENST00000381342 NLRP1Q9C000 1473 aa24.21■■□□□ 1.47
SNRPB-201ENST00000381342 RAB3GAP2Q9H2M9 1393 aa24.19■■□□□ 1.46
SNRPB-201ENST00000381342 SYNMO15061 1565 aa24.19■■□□□ 1.46
SNRPB-201ENST00000381342 RPRD2Q5VT52 1461 aaKnown RBP24.19■■□□□ 1.46
SNRPB-201ENST00000381342 ANKLE2Q86XL3 938 aa24.18■■□□□ 1.46
SNRPB-201ENST00000381342 TRIM52Q96A61 297 aa24.16■■□□□ 1.46
SNRPB-201ENST00000381342 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
SNRPB-201ENST00000381342 UGGT1Q9NYU2 1555 aa24.14■■□□□ 1.45
SNRPB-201ENST00000381342 NOS1P29475 1434 aa24.12■■□□□ 1.45
SNRPB-201ENST00000381342 TRIM26Q12899 539 aaPredicted RBP24.11■■□□□ 1.45
SNRPB-201ENST00000381342 STAG3Q9UJ98 1225 aa24.11■■□□□ 1.45
SNRPB-201ENST00000381342 PIK3C2BO00750 1634 aa24.1■■□□□ 1.45
SNRPB-201ENST00000381342 UBR1Q8IWV7 1749 aa24.08■■□□□ 1.45
SNRPB-201ENST00000381342 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
SNRPB-201ENST00000381342 TRPM2O94759 1503 aa24.03■■□□□ 1.44
SNRPB-201ENST00000381342 ZNF335Q9H4Z2 1342 aaPredicted RBP24.03■■□□□ 1.44
SNRPB-201ENST00000381342 MYO5BQ9ULV0 1848 aa24.03■■□□□ 1.44
SNRPB-201ENST00000381342 KDM5AP29375 1690 aaKnown RBP24.02■■□□□ 1.44
SNRPB-201ENST00000381342 ADGRB3O60242 1522 aa24.02■■□□□ 1.44
SNRPB-201ENST00000381342 EID1Q9Y6B2 187 aa24.02■■□□□ 1.44
SNRPB-201ENST00000381342 POLR1AO95602 1720 aaPredicted RBP24.01■■□□□ 1.43
SNRPB-201ENST00000381342 CLTCL1P53675 1640 aa24.01■■□□□ 1.43
SNRPB-201ENST00000381342 SLC52A1Q9NWF4 448 aa24■■□□□ 1.43
SNRPB-201ENST00000381342 ACIN1Q9UKV3 1341 aaKnown RBP24■■□□□ 1.43
SNRPB-201ENST00000381342 LTBP4Q8N2S1 1624 aa23.99■■□□□ 1.43
SNRPB-201ENST00000381342 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
SNRPB-201ENST00000381342 NPHP4O75161 1426 aaPredicted RBP23.99■■□□□ 1.43
SNRPB-201ENST00000381342 IDI1Q13907 227 aa23.98■■□□□ 1.43
SNRPB-201ENST00000381342 TXNDC2Q86VQ3 553 aa23.98■■□□□ 1.43
SNRPB-201ENST00000381342 FOXD1Q16676 465 aa23.97■■□□□ 1.43
SNRPB-201ENST00000381342 TMEM131LA2VDJ0 1609 aa23.96■■□□□ 1.43
SNRPB-201ENST00000381342 IQSEC2Q5JU85 1478 aa23.96■■□□□ 1.43
SNRPB-201ENST00000381342 HRCP23327 699 aa23.96■■□□□ 1.43
SNRPB-201ENST00000381342 MED14O60244 1454 aa23.95■■□□□ 1.42
SNRPB-201ENST00000381342 NEURL4Q96JN8 1562 aa23.94■■□□□ 1.42
SNRPB-201ENST00000381342 KIF1BO60333 1816 aa23.93■■□□□ 1.42
SNRPB-201ENST00000381342 SCAF11Q99590 1463 aaKnown RBP23.91■■□□□ 1.42
SNRPB-201ENST00000381342 SLIT1O75093 1534 aa23.9■■□□□ 1.42
SNRPB-201ENST00000381342 HDGFP51858 240 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms