RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
ERCC8-202ENST00000381118 FRMPD1Q5SYB0 1578 aa11.6□□□□□ -0.55
ERCC8-202ENST00000381118 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
ERCC8-202ENST00000381118 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
ERCC8-202ENST00000381118 KIF3BO15066 747 aa11.59□□□□□ -0.55
ERCC8-202ENST00000381118 IQGAP3Q86VI3 1631 aa11.58□□□□□ -0.56
ERCC8-202ENST00000381118 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
ERCC8-202ENST00000381118 ANKRD30BQ9BXX2 1392 aa11.58□□□□□ -0.56
ERCC8-202ENST00000381118 A2MP01023 1474 aa11.58□□□□□ -0.56
ERCC8-202ENST00000381118 TRHP20396 242 aaPredicted RBP11.58□□□□□ -0.56
ERCC8-202ENST00000381118 EIF2AK4Q9P2K8 1649 aaKnown RBP11.57□□□□□ -0.56
ERCC8-202ENST00000381118 MAGI2Q86UL8 1455 aa11.57□□□□□ -0.56
ERCC8-202ENST00000381118 DIP2CQ9Y2E4 1556 aa11.56□□□□□ -0.56
ERCC8-202ENST00000381118 DEPDC5O75140 1603 aa11.56□□□□□ -0.56
ERCC8-202ENST00000381118 YEATS2Q9ULM3 1422 aa11.56□□□□□ -0.56
ERCC8-202ENST00000381118 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
ERCC8-202ENST00000381118 MROH1Q8NDA8 1641 aa11.53□□□□□ -0.56
ERCC8-202ENST00000381118 ZMYM4Q5VZL5 1548 aa11.53□□□□□ -0.56
ERCC8-202ENST00000381118 RPRD2Q5VT52 1461 aaKnown RBP11.53□□□□□ -0.56
ERCC8-202ENST00000381118 CEP152O94986 1710 aa11.52□□□□□ -0.56
ERCC8-202ENST00000381118 GGT6Q6P531 493 aa11.52□□□□□ -0.56
ERCC8-202ENST00000381118 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.56
ERCC8-202ENST00000381118 PRDM15P57071 1507 aaPredicted RBP11.52□□□□□ -0.56
ERCC8-202ENST00000381118 KANK1Q14678 1352 aa11.52□□□□□ -0.57
ERCC8-202ENST00000381118 E9PCH4 1651 aa11.52□□□□□ -0.57
ERCC8-202ENST00000381118 CFAP65Q6ZU64 1925 aaKnown RBP11.51□□□□□ -0.57
ERCC8-202ENST00000381118 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
ERCC8-202ENST00000381118 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
ERCC8-202ENST00000381118 TET3O43151 1660 aa11.5□□□□□ -0.57
ERCC8-202ENST00000381118 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
ERCC8-202ENST00000381118 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
ERCC8-202ENST00000381118 VWDEQ8N2E2 1590 aa11.49□□□□□ -0.57
ERCC8-202ENST00000381118 SPHKAPQ2M3C7 1700 aa11.48□□□□□ -0.57
ERCC8-202ENST00000381118 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
ERCC8-202ENST00000381118 CCDC144AA2RUR9 1427 aa11.47□□□□□ -0.57
ERCC8-202ENST00000381118 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
ERCC8-202ENST00000381118 ATP10AO60312 1499 aa11.47□□□□□ -0.57
ERCC8-202ENST00000381118 PLA2R1Q13018 1463 aa11.47□□□□□ -0.57
ERCC8-202ENST00000381118 SIGLEC1Q9BZZ2 1709 aa11.47□□□□□ -0.57
ERCC8-202ENST00000381118 WASHC2CQ9Y4E1 1318 aa11.45□□□□□ -0.58
ERCC8-202ENST00000381118 EFCAB6Q5THR3 1501 aa11.45□□□□□ -0.58
ERCC8-202ENST00000381118 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
ERCC8-202ENST00000381118 CAMSAP1Q5T5Y3 1602 aa11.44□□□□□ -0.58
ERCC8-202ENST00000381118 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
ERCC8-202ENST00000381118 RGL3Q3MIN7 710 aa11.43□□□□□ -0.58
ERCC8-202ENST00000381118 ABCC3O15438 1527 aa11.43□□□□□ -0.58
ERCC8-202ENST00000381118 LMTK2Q8IWU2 1503 aa11.43□□□□□ -0.58
ERCC8-202ENST00000381118 MLECQ14165 292 aa11.43□□□□□ -0.58
ERCC8-202ENST00000381118 TRPM2O94759 1503 aa11.42□□□□□ -0.58
ERCC8-202ENST00000381118 CLTCL1P53675 1640 aa11.42□□□□□ -0.58
ERCC8-202ENST00000381118 REREQ9P2R6 1566 aa11.42□□□□□ -0.58
ERCC8-202ENST00000381118 ZC3H13Q5T200 1668 aaKnown RBP11.42□□□□□ -0.58
ERCC8-202ENST00000381118 HIRIP3Q9BW71 556 aaPredicted RBP11.41□□□□□ -0.58
ERCC8-202ENST00000381118 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
ERCC8-202ENST00000381118 UGGT1Q9NYU2 1555 aa11.41□□□□□ -0.58
ERCC8-202ENST00000381118 NPATQ14207 1427 aa11.41□□□□□ -0.58
ERCC8-202ENST00000381118 NBPF8Q3BBV2 869 aa11.4□□□□□ -0.58
ERCC8-202ENST00000381118 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
ERCC8-202ENST00000381118 PTPRTO14522 1441 aa11.4□□□□□ -0.58
ERCC8-202ENST00000381118 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
ERCC8-202ENST00000381118 KIF1BO60333 1816 aa11.39□□□□□ -0.59
ERCC8-202ENST00000381118 CLTCQ00610 1675 aaKnown RBP11.39□□□□□ -0.59
ERCC8-202ENST00000381118 AGLP35573 1532 aa11.39□□□□□ -0.59
ERCC8-202ENST00000381118 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
ERCC8-202ENST00000381118 DIEXFQ68CQ4 756 aaKnown RBP11.36□□□□□ -0.59
ERCC8-202ENST00000381118 SPATA31E1Q6ZUB1 1445 aa11.35□□□□□ -0.59
ERCC8-202ENST00000381118 PREX1Q8TCU6 1659 aa11.35□□□□□ -0.59
ERCC8-202ENST00000381118 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
ERCC8-202ENST00000381118 SYNMO15061 1565 aa11.34□□□□□ -0.59
ERCC8-202ENST00000381118 CNTLNQ9NXG0 1405 aa11.34□□□□□ -0.59
ERCC8-202ENST00000381118 ARHGAP31Q2M1Z3 1444 aa11.33□□□□□ -0.6
ERCC8-202ENST00000381118 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
ERCC8-202ENST00000381118 UHRF1BP1Q6BDS2 1440 aa11.33□□□□□ -0.6
ERCC8-202ENST00000381118 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
ERCC8-202ENST00000381118 NOS1P29475 1434 aa11.32□□□□□ -0.6
ERCC8-202ENST00000381118 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
ERCC8-202ENST00000381118 PRAG1Q86YV5 1406 aa11.32□□□□□ -0.6
ERCC8-202ENST00000381118 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
ERCC8-202ENST00000381118 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
ERCC8-202ENST00000381118 MYO5BQ9ULV0 1848 aa11.31□□□□□ -0.6
ERCC8-202ENST00000381118 PPP6R1Q9UPN7 881 aa11.31□□□□□ -0.6
ERCC8-202ENST00000381118 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
ERCC8-202ENST00000381118 PIK3C2BO00750 1634 aa11.3□□□□□ -0.6
ERCC8-202ENST00000381118 ADGRB3O60242 1522 aa11.3□□□□□ -0.6
ERCC8-202ENST00000381118 IFT172Q9UG01 1749 aa11.3□□□□□ -0.6
ERCC8-202ENST00000381118 ROCK2O75116 1388 aaKnown RBP11.29□□□□□ -0.6
ERCC8-202ENST00000381118 MADDQ8WXG6 1647 aa11.29□□□□□ -0.6
ERCC8-202ENST00000381118 CARD11Q9BXL7 1154 aa11.29□□□□□ -0.6
ERCC8-202ENST00000381118 ERVK-7P63135 1459 aa11.28□□□□□ -0.6
ERCC8-202ENST00000381118 IDI1Q13907 227 aa11.28□□□□□ -0.6
ERCC8-202ENST00000381118 FER1L4A9Z1Z3 1794 aa11.28□□□□□ -0.6
ERCC8-202ENST00000381118 NBPF1Q3BBV0 1214 aa11.28□□□□□ -0.6
ERCC8-202ENST00000381118 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
ERCC8-202ENST00000381118 ZMYM3Q14202 1370 aa11.28□□□□□ -0.6
ERCC8-202ENST00000381118 PPLO60437 1756 aa11.27□□□□□ -0.6
ERCC8-202ENST00000381118 USP47Q96K76 1375 aa11.27□□□□□ -0.61
ERCC8-202ENST00000381118 NUTM2DQ5VT03 806 aaPredicted RBP11.26□□□□□ -0.61
ERCC8-202ENST00000381118 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
ERCC8-202ENST00000381118 SPATA31D1Q6ZQQ2 1576 aa11.25□□□□□ -0.61
ERCC8-202ENST00000381118 ADGRF5Q8IZF2 1346 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms