RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 PDE3BQ13370 1112 aa22.99■■□□□ 1.27
UBL3-201ENST00000380680 HDGFL2Q7Z4V5 671 aaPredicted RBP22.99■■□□□ 1.27
UBL3-201ENST00000380680 C9orf84Q5VXU9 1444 aa22.98■■□□□ 1.27
UBL3-201ENST00000380680 GOLGA2Q08379 1002 aa22.98■■□□□ 1.27
UBL3-201ENST00000380680 ARHGAP5Q13017 1502 aa22.95■■□□□ 1.27
UBL3-201ENST00000380680 ZNF608Q9ULD9 1512 aaPredicted RBP22.95■■□□□ 1.27
UBL3-201ENST00000380680 PNNQ9H307 717 aaKnown RBP22.95■■□□□ 1.26
UBL3-201ENST00000380680 NOP58Q9Y2X3 529 aaKnown RBP22.95■■□□□ 1.26
UBL3-201ENST00000380680 KIAA1107Q9UPP5 1409 aa22.95■■□□□ 1.26
UBL3-201ENST00000380680 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
UBL3-201ENST00000380680 BECN1Q14457 450 aa22.93■■□□□ 1.26
UBL3-201ENST00000380680 NBPF1Q3BBV0 1214 aa22.93■■□□□ 1.26
UBL3-201ENST00000380680 TRHP20396 242 aaPredicted RBP22.93■■□□□ 1.26
UBL3-201ENST00000380680 LMOD2Q6P5Q4 547 aa22.91■■□□□ 1.26
UBL3-201ENST00000380680 ARXQ96QS3 562 aa22.91■■□□□ 1.26
UBL3-201ENST00000380680 MS4A1P11836 297 aa22.9■■□□□ 1.26
UBL3-201ENST00000380680 VGFO15240 615 aaPredicted RBP22.89■■□□□ 1.25
UBL3-201ENST00000380680 GRIN2AQ12879 1464 aa22.89■■□□□ 1.25
UBL3-201ENST00000380680 TERF2IPQ9NYB0 399 aa22.89■■□□□ 1.25
UBL3-201ENST00000380680 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
UBL3-201ENST00000380680 PTPN23Q9H3S7 1636 aa22.86■■□□□ 1.25
UBL3-201ENST00000380680 PLIN1O60240 522 aa22.86■■□□□ 1.25
UBL3-201ENST00000380680 ABCC5O15440 1437 aa22.85■■□□□ 1.25
UBL3-201ENST00000380680 CCDC184Q52MB2 194 aa22.85■■□□□ 1.25
UBL3-201ENST00000380680 RRP7AQ9Y3A4 280 aaKnown RBP22.84■■□□□ 1.25
UBL3-201ENST00000380680 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
UBL3-201ENST00000380680 TCERG1O14776 1098 aaKnown RBP22.82■■□□□ 1.24
UBL3-201ENST00000380680 STAC3Q96MF2 364 aa22.82■■□□□ 1.24
UBL3-201ENST00000380680 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
UBL3-201ENST00000380680 APAF1O14727 1248 aa22.81■■□□□ 1.24
UBL3-201ENST00000380680 EXOC6Q8TAG9 804 aa22.81■■□□□ 1.24
UBL3-201ENST00000380680 CFAP70Q5T0N1 1121 aa22.8■■□□□ 1.24
UBL3-201ENST00000380680 CLUAP1Q96AJ1 413 aa22.8■■□□□ 1.24
UBL3-201ENST00000380680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.79■■□□□ 1.246e-7■■■■□ 23.3
UBL3-201ENST00000380680 PTPRKQ15262 1439 aa22.79■■□□□ 1.24
UBL3-201ENST00000380680 C11orf95C9JLR9 678 aaPredicted RBP22.79■■□□□ 1.24
UBL3-201ENST00000380680 RRP1P56182 461 aaKnown RBP22.79■■□□□ 1.24
UBL3-201ENST00000380680 MAGI1Q96QZ7 1491 aaPredicted RBP22.78■■□□□ 1.24
UBL3-201ENST00000380680 EVC2Q86UK5 1308 aa22.77■■□□□ 1.24
UBL3-201ENST00000380680 MINK1Q8N4C8 1332 aaPredicted RBP22.77■■□□□ 1.24
UBL3-201ENST00000380680 NUTM2FA1L443 756 aa22.77■■□□□ 1.24
UBL3-201ENST00000380680 TMEM132EQ6IEE7 984 aa22.77■■□□□ 1.24
UBL3-201ENST00000380680 CHMP4BQ9H444 224 aaKnown RBP22.76■■□□□ 1.23
UBL3-201ENST00000380680 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
UBL3-201ENST00000380680 CAMSAP2Q08AD1 1489 aa22.75■■□□□ 1.23
UBL3-201ENST00000380680 CGNL1Q0VF96 1302 aa22.75■■□□□ 1.23
UBL3-201ENST00000380680 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
UBL3-201ENST00000380680 ANP32BQ92688 251 aaKnown RBP22.74■■□□□ 1.23
UBL3-201ENST00000380680 SCAPERQ9BY12 1400 aa22.74■■□□□ 1.23
UBL3-201ENST00000380680 FAM69CQ0P6D2 419 aa22.73■■□□□ 1.23
UBL3-201ENST00000380680 IPO8O15397 1037 aaKnown RBP22.73■■□□□ 1.23
UBL3-201ENST00000380680 SMC4Q9NTJ3 1288 aa22.72■■□□□ 1.23
UBL3-201ENST00000380680 AKNAQ7Z591 1439 aa22.71■■□□□ 1.23
UBL3-201ENST00000380680 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
UBL3-201ENST00000380680 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
UBL3-201ENST00000380680 PLEKHH2Q8IVE3 1493 aa22.71■■□□□ 1.23
UBL3-201ENST00000380680 ITPRIPQ8IWB1 547 aa22.71■■□□□ 1.23
UBL3-201ENST00000380680 BCL2L13Q9BXK5 485 aa22.7■■□□□ 1.22
UBL3-201ENST00000380680 MAPKBP1O60336 1514 aa22.69■■□□□ 1.22
UBL3-201ENST00000380680 CRBNQ96SW2 442 aa22.69■■□□□ 1.22
UBL3-201ENST00000380680 ADAMTS8Q9UP79 889 aa22.69■■□□□ 1.22
UBL3-201ENST00000380680 A0A0G2JS52 829 aa22.68■■□□□ 1.22
UBL3-201ENST00000380680 PAK3O75914 559 aaPredicted RBP22.68■■□□□ 1.22
UBL3-201ENST00000380680 PNISRQ8TF01 805 aaKnown RBP22.68■■□□□ 1.22
UBL3-201ENST00000380680 RTF1Q92541 710 aaKnown RBP22.67■■□□□ 1.22
UBL3-201ENST00000380680 RWDD1Q9H446 243 aaPredicted RBP22.67■■□□□ 1.22
UBL3-201ENST00000380680 E9PSI1 815 aa22.67■■□□□ 1.22
UBL3-201ENST00000380680 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
UBL3-201ENST00000380680 CDCA7LQ96GN5 454 aa22.66■■□□□ 1.22
UBL3-201ENST00000380680 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
UBL3-201ENST00000380680 CCDC141Q6ZP82 1450 aa22.65■■□□□ 1.22
UBL3-201ENST00000380680 EID1Q9Y6B2 187 aa22.64■■□□□ 1.22
UBL3-201ENST00000380680 CASC1Q6TDU7 716 aa22.62■■□□□ 1.21
UBL3-201ENST00000380680 NGDNQ8NEJ9 315 aaKnown RBP22.61■■□□□ 1.21
UBL3-201ENST00000380680 IPO9Q96P70 1041 aaKnown RBP22.61■■□□□ 1.21
UBL3-201ENST00000380680 RAPGEF3O95398 923 aa22.6■■□□□ 1.21
UBL3-201ENST00000380680 PMFBP1Q8TBY8 1022 aa22.6■■□□□ 1.21
UBL3-201ENST00000380680 RPRD2Q5VT52 1461 aaKnown RBP22.6■■□□□ 1.21
UBL3-201ENST00000380680 PPP2R1AP30153 589 aa22.6■■□□□ 1.21
UBL3-201ENST00000380680 UGGT2Q9NYU1 1516 aa22.6■■□□□ 1.21
UBL3-201ENST00000380680 GPATCH8Q9UKJ3 1502 aaKnown RBP22.6■■□□□ 1.21
UBL3-201ENST00000380680 CABP2Q9NPB3 220 aa22.6■■□□□ 1.21
UBL3-201ENST00000380680 APBB1O00213 710 aa22.59■■□□□ 1.21
UBL3-201ENST00000380680 COG6Q9Y2V7 657 aa22.59■■□□□ 1.21
UBL3-201ENST00000380680 ELL2O00472 640 aaPredicted RBP22.58■■□□□ 1.2
UBL3-201ENST00000380680 NUP153P49790 1475 aaKnown RBP22.57■■□□□ 1.2
UBL3-201ENST00000380680 PDE4AP27815 886 aa22.57■■□□□ 1.2
UBL3-201ENST00000380680 GGNBP2Q9H3C7 697 aa22.57■■□□□ 1.2
UBL3-201ENST00000380680 SLC12A5Q9H2X9 1139 aa22.56■■□□□ 1.2
UBL3-201ENST00000380680 SPRYD3Q8NCJ5 442 aa22.56■■□□□ 1.2
UBL3-201ENST00000380680 CENPQQ7L2Z9 268 aaPredicted RBP22.55■■□□□ 1.2
UBL3-201ENST00000380680 KIF14Q15058 1648 aa22.55■■□□□ 1.2
UBL3-201ENST00000380680 CTTNBP2Q8WZ74 1663 aa22.55■■□□□ 1.2
UBL3-201ENST00000380680 EIF5BO60841 1220 aaKnown RBP22.54■■□□□ 1.2
UBL3-201ENST00000380680 GOLGA6L22H0YM25 854 aa22.54■■□□□ 1.2
UBL3-201ENST00000380680 MTHFSP49914 203 aa22.54■■□□□ 1.2
UBL3-201ENST00000380680 NGEFQ8N5V2 710 aa22.53■■□□□ 1.2
UBL3-201ENST00000380680 COG3Q96JB2 828 aa22.53■■□□□ 1.2
UBL3-201ENST00000380680 RUNDC1Q96C34 613 aa22.52■■□□□ 1.2
UBL3-201ENST00000380680 HSP90AB1P08238 724 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms