RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 NAP1L2Q9ULW6 460 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-202ENST00000379237 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
USP6NL-202ENST00000379237 SMAP1Q8IYB5 467 aaPredicted RBP13.72□□□□□ -0.21
USP6NL-202ENST00000379237 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
USP6NL-202ENST00000379237 USP47Q96K76 1375 aa13.72□□□□□ -0.21
USP6NL-202ENST00000379237 ROCK2O75116 1388 aaKnown RBP13.71□□□□□ -0.21
USP6NL-202ENST00000379237 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-202ENST00000379237 LRRC9Q6ZRR7 1453 aa13.71□□□□□ -0.22
USP6NL-202ENST00000379237 PLCD3Q8N3E9 789 aa13.71□□□□□ -0.22
USP6NL-202ENST00000379237 C22orf23Q9BZE7 217 aa13.71□□□□□ -0.22
USP6NL-202ENST00000379237 NCOA1Q15788 1441 aa13.7□□□□□ -0.22
USP6NL-202ENST00000379237 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
USP6NL-202ENST00000379237 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
USP6NL-202ENST00000379237 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-202ENST00000379237 ST20-MTHFSA0A0A6YYL1 179 aa13.68□□□□□ -0.22
USP6NL-202ENST00000379237 OFD1O75665 1012 aa13.68□□□□□ -0.22
USP6NL-202ENST00000379237 RWDD1Q9H446 243 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-202ENST00000379237 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-202ENST00000379237 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
USP6NL-202ENST00000379237 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
USP6NL-202ENST00000379237 CGNQ9P2M7 1197 aaKnown RBP13.67□□□□□ -0.22
USP6NL-202ENST00000379237 CCDC146Q8IYE0 955 aa13.66□□□□□ -0.22
USP6NL-202ENST00000379237 CENPJQ9HC77 1338 aaPredicted RBP13.66□□□□□ -0.22
USP6NL-202ENST00000379237 VGLL3A8MV65 326 aa13.66□□□□□ -0.22
USP6NL-202ENST00000379237 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
USP6NL-202ENST00000379237 SEC24BO95487 1268 aa13.65□□□□□ -0.22
USP6NL-202ENST00000379237 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
USP6NL-202ENST00000379237 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
USP6NL-202ENST00000379237 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
USP6NL-202ENST00000379237 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
USP6NL-202ENST00000379237 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
USP6NL-202ENST00000379237 RGL3Q3MIN7 710 aa13.64□□□□□ -0.23
USP6NL-202ENST00000379237 FSD2A1L4K1 749 aa13.63□□□□□ -0.23
USP6NL-202ENST00000379237 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
USP6NL-202ENST00000379237 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
USP6NL-202ENST00000379237 PPP4R3BQ5MIZ7 849 aa13.62□□□□□ -0.23
USP6NL-202ENST00000379237 SASS6Q6UVJ0 657 aa13.62□□□□□ -0.23
USP6NL-202ENST00000379237 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
USP6NL-202ENST00000379237 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
USP6NL-202ENST00000379237 MPNDQ8N594 471 aa13.62□□□□□ -0.23
USP6NL-202ENST00000379237 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
USP6NL-202ENST00000379237 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
USP6NL-202ENST00000379237 CCDC39Q9UFE4 941 aa13.61□□□□□ -0.23
USP6NL-202ENST00000379237 PEG3Q9GZU2 1588 aa13.61□□□□□ -0.23
USP6NL-202ENST00000379237 FGD6Q6ZV73 1430 aa13.61□□□□□ -0.23
USP6NL-202ENST00000379237 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
USP6NL-202ENST00000379237 BCAR3O75815 825 aa13.61□□□□□ -0.23
USP6NL-202ENST00000379237 IGSF3O75054 1194 aa13.6□□□□□ -0.23
USP6NL-202ENST00000379237 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
USP6NL-202ENST00000379237 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-202ENST00000379237 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
USP6NL-202ENST00000379237 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
USP6NL-202ENST00000379237 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
USP6NL-202ENST00000379237 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
USP6NL-202ENST00000379237 PRDM4Q9UKN5 801 aa13.59□□□□□ -0.23
USP6NL-202ENST00000379237 FOXD4L5Q5VV16 416 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-202ENST00000379237 FOXD4L4Q8WXT5 416 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-202ENST00000379237 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
USP6NL-202ENST00000379237 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
USP6NL-202ENST00000379237 CARMIL1Q5VZK9 1371 aa13.59□□□□□ -0.23
USP6NL-202ENST00000379237 TBC1D32Q96NH3 1257 aa13.58□□□□□ -0.24
USP6NL-202ENST00000379237 FHOD3Q2V2M9 1422 aa13.58□□□□□ -0.24
USP6NL-202ENST00000379237 TIAM1Q13009 1591 aa13.58□□□□□ -0.24
USP6NL-202ENST00000379237 HFM1A2PYH4 1435 aa13.58□□□□□ -0.24
USP6NL-202ENST00000379237 E9PSI1 815 aa13.58□□□□□ -0.24
USP6NL-202ENST00000379237 HMGN5P82970 282 aaKnown RBP13.58□□□□□ -0.24
USP6NL-202ENST00000379237 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
USP6NL-202ENST00000379237 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
USP6NL-202ENST00000379237 TAF3Q5VWG9 929 aa13.57□□□□□ -0.24
USP6NL-202ENST00000379237 PKD2Q13563 968 aa13.57□□□□□ -0.24
USP6NL-202ENST00000379237 IGHDP01880 384 aa13.57□□□□□ -0.24
USP6NL-202ENST00000379237 LETM1O95202 739 aaPredicted RBP13.56□□□□□ -0.24
USP6NL-202ENST00000379237 AEBP1Q8IUX7 1158 aa13.56□□□□□ -0.24
USP6NL-202ENST00000379237 APAF1O14727 1248 aa13.56□□□□□ -0.24
USP6NL-202ENST00000379237 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
USP6NL-202ENST00000379237 PANK3Q9H999 370 aa13.55□□□□□ -0.24
USP6NL-202ENST00000379237 RIPK4P57078 832 aa13.55□□□□□ -0.24
USP6NL-202ENST00000379237 PDCL2Q8N4E4 241 aa13.55□□□□□ -0.24
USP6NL-202ENST00000379237 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
USP6NL-202ENST00000379237 CCDC66A2RUB6 948 aa13.54□□□□□ -0.24
USP6NL-202ENST00000379237 KIF20AO95235 890 aa13.54□□□□□ -0.24
USP6NL-202ENST00000379237 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
USP6NL-202ENST00000379237 TERF1P54274 439 aa13.54□□□□□ -0.24
USP6NL-202ENST00000379237 DMTNQ08495 405 aa13.54□□□□□ -0.24
USP6NL-202ENST00000379237 GAS2L3Q86XJ1 694 aa13.53□□□□□ -0.24
USP6NL-202ENST00000379237 KCNJ4P48050 445 aa13.53□□□□□ -0.24
USP6NL-202ENST00000379237 NAIPQ13075 1403 aa13.52□□□□□ -0.24
USP6NL-202ENST00000379237 TMF1P82094 1093 aa13.52□□□□□ -0.24
USP6NL-202ENST00000379237 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
USP6NL-202ENST00000379237 ITPRIPQ8IWB1 547 aa13.52□□□□□ -0.25
USP6NL-202ENST00000379237 SYAP1Q96A49 352 aaPredicted RBP13.51□□□□□ -0.25
USP6NL-202ENST00000379237 ANTXR1Q9H6X2 564 aa13.51□□□□□ -0.25
USP6NL-202ENST00000379237 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
USP6NL-202ENST00000379237 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
USP6NL-202ENST00000379237 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-202ENST00000379237 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
USP6NL-202ENST00000379237 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
USP6NL-202ENST00000379237 ZKSCAN5Q9Y2L8 839 aa13.5□□□□□ -0.25
USP6NL-202ENST00000379237 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
USP6NL-202ENST00000379237 DRC7Q8IY82 874 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms