RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 KNSTRNQ9Y448 316 aa12.71□□□□□ -0.37
C4orf46-201ENST00000379205 PANK1Q8TE04 598 aa12.71□□□□□ -0.38
C4orf46-201ENST00000379205 NUP155O75694 1391 aa12.7□□□□□ -0.38
C4orf46-201ENST00000379205 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
C4orf46-201ENST00000379205 APAF1O14727 1248 aa12.69□□□□□ -0.38
C4orf46-201ENST00000379205 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
C4orf46-201ENST00000379205 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
C4orf46-201ENST00000379205 KDM6BO15054 1643 aa12.67□□□□□ -0.38
C4orf46-201ENST00000379205 IGHDP01880 384 aa12.67□□□□□ -0.38
C4orf46-201ENST00000379205 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
C4orf46-201ENST00000379205 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
C4orf46-201ENST00000379205 SENP3Q9H4L4 574 aaPredicted RBP12.67□□□□□ -0.38
C4orf46-201ENST00000379205 RPRD2Q5VT52 1461 aaKnown RBP12.66□□□□□ -0.38
C4orf46-201ENST00000379205 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
C4orf46-201ENST00000379205 XRCC6P12956 609 aaKnown RBP eCLIP12.65□□□□□ -0.38
C4orf46-201ENST00000379205 SPATA31E1Q6ZUB1 1445 aa12.65□□□□□ -0.38
C4orf46-201ENST00000379205 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
C4orf46-201ENST00000379205 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
C4orf46-201ENST00000379205 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
C4orf46-201ENST00000379205 TMF1P82094 1093 aa12.62□□□□□ -0.39
C4orf46-201ENST00000379205 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
C4orf46-201ENST00000379205 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
C4orf46-201ENST00000379205 LRPPRCP42704 1394 aaKnown RBP12.61□□□□□ -0.39
C4orf46-201ENST00000379205 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
C4orf46-201ENST00000379205 TRAK2O60296 914 aa12.61□□□□□ -0.39
C4orf46-201ENST00000379205 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
C4orf46-201ENST00000379205 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
C4orf46-201ENST00000379205 CDK13Q14004 1512 aaKnown RBP12.6□□□□□ -0.39
C4orf46-201ENST00000379205 MIA2Q96PC5 1412 aa12.6□□□□□ -0.39
C4orf46-201ENST00000379205 KDM2BQ8NHM5 1336 aa12.6□□□□□ -0.39
C4orf46-201ENST00000379205 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
C4orf46-201ENST00000379205 LAMC3Q9Y6N6 1575 aa12.59□□□□□ -0.39
C4orf46-201ENST00000379205 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
C4orf46-201ENST00000379205 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
C4orf46-201ENST00000379205 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
C4orf46-201ENST00000379205 MCM4P33991 863 aa12.57□□□□□ -0.4
C4orf46-201ENST00000379205 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
C4orf46-201ENST00000379205 TEX14Q8IWB6 1497 aa12.57□□□□□ -0.4
C4orf46-201ENST00000379205 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
C4orf46-201ENST00000379205 PPP2R1AP30153 589 aa12.56□□□□□ -0.4
C4orf46-201ENST00000379205 CENPJQ9HC77 1338 aaPredicted RBP12.56□□□□□ -0.4
C4orf46-201ENST00000379205 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
C4orf46-201ENST00000379205 HSCBQ8IWL3 235 aa12.56□□□□□ -0.4
C4orf46-201ENST00000379205 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
C4orf46-201ENST00000379205 DAPK1P53355 1430 aa12.56□□□□□ -0.4
C4orf46-201ENST00000379205 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
C4orf46-201ENST00000379205 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
C4orf46-201ENST00000379205 FAM13BQ9NYF5 915 aa12.55□□□□□ -0.4
C4orf46-201ENST00000379205 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
C4orf46-201ENST00000379205 ESPNB1AK53 854 aa12.55□□□□□ -0.4
C4orf46-201ENST00000379205 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
C4orf46-201ENST00000379205 ABCC5O15440 1437 aa12.55□□□□□ -0.4
C4orf46-201ENST00000379205 SNAPC4Q5SXM2 1469 aa12.54□□□□□ -0.4
C4orf46-201ENST00000379205 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
C4orf46-201ENST00000379205 DMRT2Q9Y5R5 561 aa12.54□□□□□ -0.4
C4orf46-201ENST00000379205 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
C4orf46-201ENST00000379205 SLFN5Q08AF3 891 aa12.53□□□□□ -0.4
C4orf46-201ENST00000379205 EFCAB5A4FU69 1503 aa12.53□□□□□ -0.4
C4orf46-201ENST00000379205 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
C4orf46-201ENST00000379205 PDS5BQ9NTI5 1447 aa12.52□□□□□ -0.4
C4orf46-201ENST00000379205 BCORL1Q5H9F3 1711 aa12.52□□□□□ -0.41
C4orf46-201ENST00000379205 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
C4orf46-201ENST00000379205 MAPK8IP3Q9UPT6 1336 aa12.52□□□□□ -0.41
C4orf46-201ENST00000379205 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.41
C4orf46-201ENST00000379205 ANKRD30AQ9BXX3 1397 aa12.52□□□□□ -0.41
C4orf46-201ENST00000379205 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
C4orf46-201ENST00000379205 MAGI3Q5TCQ9 1506 aa12.51□□□□□ -0.41
C4orf46-201ENST00000379205 MRE11P49959 708 aa12.51□□□□□ -0.41
C4orf46-201ENST00000379205 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
C4orf46-201ENST00000379205 RRP9O43818 475 aaKnown RBP12.5□□□□□ -0.41
C4orf46-201ENST00000379205 DISP3Q9P2K9 1392 aa12.5□□□□□ -0.41
C4orf46-201ENST00000379205 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
C4orf46-201ENST00000379205 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
C4orf46-201ENST00000379205 CLCN1P35523 988 aa12.5□□□□□ -0.41
C4orf46-201ENST00000379205 USP19O94966 1318 aa12.5□□□□□ -0.41
C4orf46-201ENST00000379205 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
C4orf46-201ENST00000379205 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
C4orf46-201ENST00000379205 PCDHB15Q9Y5E8 787 aa12.49□□□□□ -0.41
C4orf46-201ENST00000379205 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
C4orf46-201ENST00000379205 RWDD1Q9H446 243 aaPredicted RBP12.49□□□□□ -0.41
C4orf46-201ENST00000379205 ANKRD50Q9ULJ7 1429 aa12.49□□□□□ -0.41
C4orf46-201ENST00000379205 PARD3Q8TEW0 1356 aa12.49□□□□□ -0.41
C4orf46-201ENST00000379205 UGGT2Q9NYU1 1516 aa12.49□□□□□ -0.41
C4orf46-201ENST00000379205 E9PSI1 815 aa12.48□□□□□ -0.41
C4orf46-201ENST00000379205 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
C4orf46-201ENST00000379205 ITPRIPQ8IWB1 547 aa12.48□□□□□ -0.41
C4orf46-201ENST00000379205 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
C4orf46-201ENST00000379205 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
C4orf46-201ENST00000379205 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
C4orf46-201ENST00000379205 MPNDQ8N594 471 aa12.48□□□□□ -0.41
C4orf46-201ENST00000379205 R3HCC1Q9Y3T6 440 aaKnown RBP12.48□□□□□ -0.41
C4orf46-201ENST00000379205 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
C4orf46-201ENST00000379205 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
C4orf46-201ENST00000379205 RLBP1P12271 317 aa12.46□□□□□ -0.42
C4orf46-201ENST00000379205 TBC1D32Q96NH3 1257 aa12.46□□□□□ -0.42
C4orf46-201ENST00000379205 HECW1Q76N89 1606 aa12.46□□□□□ -0.42
C4orf46-201ENST00000379205 DDX49Q9Y6V7 483 aaKnown RBP12.45□□□□□ -0.42
C4orf46-201ENST00000379205 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
C4orf46-201ENST00000379205 ERBB4Q15303 1308 aa12.45□□□□□ -0.42
C4orf46-201ENST00000379205 GAPVD1Q14C86 1478 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms