RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 KANK1Q14678 1352 aa33.61■■■□□ 2.97
CBWD1-203ENST00000377400 RNF17Q9BXT8 1623 aaKnown RBP33.61■■■□□ 2.97
CBWD1-203ENST00000377400 WASHC2CQ9Y4E1 1318 aa33.61■■■□□ 2.97
CBWD1-203ENST00000377400 PCGF6Q9BYE7 350 aa33.6■■■□□ 2.97
CBWD1-203ENST00000377400 TRIM52Q96A61 297 aa33.58■■■□□ 2.97
CBWD1-203ENST00000377400 PPP6R1Q9UPN7 881 aa33.57■■■□□ 2.97
CBWD1-203ENST00000377400 FER1L4A9Z1Z3 1794 aa33.56■■■□□ 2.96
CBWD1-203ENST00000377400 MADDQ8WXG6 1647 aa33.56■■■□□ 2.96
CBWD1-203ENST00000377400 RAB3GAP2Q9H2M9 1393 aa33.55■■■□□ 2.96
CBWD1-203ENST00000377400 DEPDC5O75140 1603 aa33.55■■■□□ 2.96
CBWD1-203ENST00000377400 ADAMTSL3P82987 1691 aa33.54■■■□□ 2.96
CBWD1-203ENST00000377400 PLPPR3Q6T4P5 718 aa33.54■■■□□ 2.96
CBWD1-203ENST00000377400 PRDM15P57071 1507 aaPredicted RBP33.53■■■□□ 2.96
CBWD1-203ENST00000377400 KDM4FA0A1W2PPD8 638 aa33.53■■■□□ 2.96
CBWD1-203ENST00000377400 NUP155O75694 1391 aa33.53■■■□□ 2.96
CBWD1-203ENST00000377400 MROH1Q8NDA8 1641 aa33.53■■■□□ 2.96
CBWD1-203ENST00000377400 KDM5DQ9BY66 1539 aa33.51■■■□□ 2.96
CBWD1-203ENST00000377400 UNC13BO14795 1591 aa33.51■■■□□ 2.95
CBWD1-203ENST00000377400 CNTLNQ9NXG0 1405 aa33.5■■■□□ 2.95
CBWD1-203ENST00000377400 CLTCQ00610 1675 aaKnown RBP33.49■■■□□ 2.95
CBWD1-203ENST00000377400 RIMS1Q86UR5 1692 aaKnown RBP33.49■■■□□ 2.95
CBWD1-203ENST00000377400 ABCC3O15438 1527 aa33.45■■■□□ 2.95
CBWD1-203ENST00000377400 FAM135AQ9P2D6 1515 aa33.44■■■□□ 2.94
CBWD1-203ENST00000377400 CEP152O94986 1710 aa33.44■■■□□ 2.94
CBWD1-203ENST00000377400 ZC3H13Q5T200 1668 aaKnown RBP33.44■■■□□ 2.94
CBWD1-203ENST00000377400 ACIN1Q9UKV3 1341 aaKnown RBP33.43■■■□□ 2.94
CBWD1-203ENST00000377400 ZMYM3Q14202 1370 aa33.41■■■□□ 2.94
CBWD1-203ENST00000377400 CEBPAP49715 358 aaPredicted RBP33.39■■■□□ 2.94
CBWD1-203ENST00000377400 VWDEQ8N2E2 1590 aa33.39■■■□□ 2.94
CBWD1-203ENST00000377400 PTPRMP28827 1452 aa33.38■■■□□ 2.93
CBWD1-203ENST00000377400 IQGAP3Q86VI3 1631 aa33.38■■■□□ 2.93
CBWD1-203ENST00000377400 HRCP23327 699 aa33.37■■■□□ 2.93
CBWD1-203ENST00000377400 SLC4A1APQ9BWU0 796 aaKnown RBP33.37■■■□□ 2.93
CBWD1-203ENST00000377400 MROH2AA6NES4 1674 aa33.36■■■□□ 2.93
CBWD1-203ENST00000377400 CAMSAP1Q5T5Y3 1602 aa33.35■■■□□ 2.93
CBWD1-203ENST00000377400 LMTK2Q8IWU2 1503 aa33.34■■■□□ 2.93
CBWD1-203ENST00000377400 TET3O43151 1660 aa33.3■■■□□ 2.92
CBWD1-203ENST00000377400 C3P01024 1663 aa33.3■■■□□ 2.92
CBWD1-203ENST00000377400 EFCAB6Q5THR3 1501 aa33.29■■■□□ 2.92
CBWD1-203ENST00000377400 MPHOSPH9Q99550 1183 aa33.28■■■□□ 2.92
CBWD1-203ENST00000377400 PZPP20742 1482 aa33.27■■■□□ 2.92
CBWD1-203ENST00000377400 NPATQ14207 1427 aa33.26■■■□□ 2.91
CBWD1-203ENST00000377400 PKD2Q13563 968 aa33.26■■■□□ 2.91
CBWD1-203ENST00000377400 FBXO31Q5XUX0 539 aaPredicted RBP33.26■■■□□ 2.91
CBWD1-203ENST00000377400 ARHGAP31Q2M1Z3 1444 aa33.24■■■□□ 2.91
CBWD1-203ENST00000377400 CFAP65Q6ZU64 1925 aaKnown RBP33.21■■■□□ 2.91
CBWD1-203ENST00000377400 AEBP2Q6ZN18 517 aaPredicted RBP33.2■■■□□ 2.91
CBWD1-203ENST00000377400 RPRD2Q5VT52 1461 aaKnown RBP33.19■■■□□ 2.9
CBWD1-203ENST00000377400 E9PCH4 1651 aa33.19■■■□□ 2.9
CBWD1-203ENST00000377400 FOXD1Q16676 465 aa33.18■■■□□ 2.9
CBWD1-203ENST00000377400 ERVK-7P63135 1459 aa33.16■■■□□ 2.9
CBWD1-203ENST00000377400 TNRQ92752 1358 aa33.14■■■□□ 2.9
CBWD1-203ENST00000377400 PREX1Q8TCU6 1659 aa33.13■■■□□ 2.89
CBWD1-203ENST00000377400 SPATA31D1Q6ZQQ2 1576 aa33.1■■■□□ 2.89
CBWD1-203ENST00000377400 NOS1P29475 1434 aa33.06■■■□□ 2.88
CBWD1-203ENST00000377400 SPHKAPQ2M3C7 1700 aa33.03■■■□□ 2.88
CBWD1-203ENST00000377400 UHRF1BP1Q6BDS2 1440 aa33.03■■■□□ 2.88
CBWD1-203ENST00000377400 SETD1BQ9UPS6 1966 aaKnown RBP33.02■■■□□ 2.88
CBWD1-203ENST00000377400 SYNMO15061 1565 aa33.01■■■□□ 2.88
CBWD1-203ENST00000377400 SLC52A1Q9NWF4 448 aa33■■■□□ 2.87
CBWD1-203ENST00000377400 STAG3Q9UJ98 1225 aa33■■■□□ 2.87
CBWD1-203ENST00000377400 DHX57Q6P158 1386 aaKnown RBP33■■■□□ 2.87
CBWD1-203ENST00000377400 PTPRTO14522 1441 aa33■■■□□ 2.87
CBWD1-203ENST00000377400 MYO3AQ8NEV4 1616 aa32.99■■■□□ 2.87
CBWD1-203ENST00000377400 NLRP1Q9C000 1473 aa32.98■■■□□ 2.87
CBWD1-203ENST00000377400 IDI1Q13907 227 aa32.97■■■□□ 2.87
CBWD1-203ENST00000377400 TRPM2O94759 1503 aa32.96■■■□□ 2.87
CBWD1-203ENST00000377400 CHGAP10645 457 aaKnown RBP32.96■■■□□ 2.87
CBWD1-203ENST00000377400 UGGT1Q9NYU2 1555 aa32.96■■■□□ 2.87
CBWD1-203ENST00000377400 PLA2R1Q13018 1463 aa32.94■■■□□ 2.86
CBWD1-203ENST00000377400 CCDC144AA2RUR9 1427 aa32.94■■■□□ 2.86
CBWD1-203ENST00000377400 CEP170BQ9Y4F5 1589 aaPredicted RBP32.91■■■□□ 2.86
CBWD1-203ENST00000377400 A2ML1A8K2U0 1454 aa32.9■■■□□ 2.86
CBWD1-203ENST00000377400 ANKRD30BQ9BXX2 1392 aa32.89■■■□□ 2.86
CBWD1-203ENST00000377400 PIK3C2BO00750 1634 aa32.87■■■□□ 2.85
CBWD1-203ENST00000377400 CLTCL1P53675 1640 aa32.87■■■□□ 2.85
CBWD1-203ENST00000377400 CCER1Q8TC90 406 aaPredicted RBP32.85■■■□□ 2.85
CBWD1-203ENST00000377400 LMTK3Q96Q04 1460 aa32.85■■■□□ 2.85
CBWD1-203ENST00000377400 ZNF142P52746 1687 aaPredicted RBP32.84■■■□□ 2.85
CBWD1-203ENST00000377400 THEMISQ8N1K5 641 aaPredicted RBP32.84■■■□□ 2.85
CBWD1-203ENST00000377400 HSPA2P54652 639 aa32.83■■■□□ 2.85
CBWD1-203ENST00000377400 ZNF326Q5BKZ1 582 aaKnown RBP32.81■■■□□ 2.84
CBWD1-203ENST00000377400 ADGRB3O60242 1522 aa32.81■■■□□ 2.84
CBWD1-203ENST00000377400 UBR1Q8IWV7 1749 aa32.78■■■□□ 2.84
CBWD1-203ENST00000377400 KIF1BO60333 1816 aa32.77■■■□□ 2.84
CBWD1-203ENST00000377400 NEUROD1Q13562 356 aa32.75■■■□□ 2.83
CBWD1-203ENST00000377400 RGL3Q3MIN7 710 aa32.75■■■□□ 2.83
CBWD1-203ENST00000377400 TMEM131LA2VDJ0 1609 aa32.75■■■□□ 2.83
CBWD1-203ENST00000377400 SIN3AQ96ST3 1273 aa32.73■■■□□ 2.83
CBWD1-203ENST00000377400 KDM5AP29375 1690 aaKnown RBP32.72■■■□□ 2.83
CBWD1-203ENST00000377400 MYO5BQ9ULV0 1848 aa32.7■■■□□ 2.83
CBWD1-203ENST00000377400 TMEM2Q9UHN6 1383 aa32.68■■■□□ 2.82
CBWD1-203ENST00000377400 EID1Q9Y6B2 187 aa32.68■■■□□ 2.82
CBWD1-203ENST00000377400 PPP1R15AO75807 674 aaPredicted RBP32.66■■■□□ 2.82
CBWD1-203ENST00000377400 HDGFP51858 240 aaKnown RBP32.66■■■□□ 2.82
CBWD1-203ENST00000377400 ANKLE2Q86XL3 938 aa32.66■■■□□ 2.82
CBWD1-203ENST00000377400 NUTM2DQ5VT03 806 aaPredicted RBP32.65■■■□□ 2.82
CBWD1-203ENST00000377400 TXNDC2Q86VQ3 553 aa32.65■■■□□ 2.82
CBWD1-203ENST00000377400 SPATA31E1Q6ZUB1 1445 aa32.64■■■□□ 2.82
CBWD1-203ENST00000377400 RIMS2Q9UQ26 1411 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms