RNA–Protein interactions for RNA: ENST00000377351.8

UBA1-203, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-203ENST00000377351 C9orf84Q5VXU9 1444 aa12.8□□□□□ -0.36
UBA1-203ENST00000377351 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
UBA1-203ENST00000377351 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
UBA1-203ENST00000377351 USP35Q9P2H5 1018 aa12.79□□□□□ -0.36
UBA1-203ENST00000377351 ANKRD50Q9ULJ7 1429 aa12.79□□□□□ -0.36
UBA1-203ENST00000377351 RGS3P49796 1198 aa12.78□□□□□ -0.36
UBA1-203ENST00000377351 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
UBA1-203ENST00000377351 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
UBA1-203ENST00000377351 L3MBTL2Q969R5 705 aa12.77□□□□□ -0.36
UBA1-203ENST00000377351 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
UBA1-203ENST00000377351 CDC42BPBQ9Y5S2 1711 aa12.77□□□□□ -0.37
UBA1-203ENST00000377351 SHANK2Q9UPX8 1470 aa12.76□□□□□ -0.37
UBA1-203ENST00000377351 PREX2Q70Z35 1606 aa12.76□□□□□ -0.37
UBA1-203ENST00000377351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■□□□□ 8.3
UBA1-203ENST00000377351 TTC37Q6PGP7 1564 aa12.76□□□□□ -0.37
UBA1-203ENST00000377351 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
UBA1-203ENST00000377351 RSPH4AQ5TD94 716 aa12.76□□□□□ -0.37
UBA1-203ENST00000377351 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
UBA1-203ENST00000377351 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
UBA1-203ENST00000377351 PKD2Q13563 968 aa12.75□□□□□ -0.37
UBA1-203ENST00000377351 KIF15Q9NS87 1388 aa12.75□□□□□ -0.37
UBA1-203ENST00000377351 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
UBA1-203ENST00000377351 ARXQ96QS3 562 aa12.75□□□□□ -0.37
UBA1-203ENST00000377351 PZPP20742 1482 aa12.75□□□□□ -0.37
UBA1-203ENST00000377351 UHRF1BP1LA0JNW5 1464 aa12.74□□□□□ -0.37
UBA1-203ENST00000377351 KDM5BQ9UGL1 1544 aa12.74□□□□□ -0.37
UBA1-203ENST00000377351 RRP9O43818 475 aaKnown RBP12.74□□□□□ -0.37
UBA1-203ENST00000377351 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
UBA1-203ENST00000377351 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
UBA1-203ENST00000377351 NUP155O75694 1391 aa12.74□□□□□ -0.37
UBA1-203ENST00000377351 CCDC141Q6ZP82 1450 aa12.74□□□□□ -0.37
UBA1-203ENST00000377351 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
UBA1-203ENST00000377351 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
UBA1-203ENST00000377351 CNGB1Q14028 1251 aaPredicted RBP12.73□□□□□ -0.37
UBA1-203ENST00000377351 ANP32CO43423 234 aa12.72□□□□□ -0.37
UBA1-203ENST00000377351 IPO9Q96P70 1041 aaKnown RBP12.72□□□□□ -0.37
UBA1-203ENST00000377351 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
UBA1-203ENST00000377351 RPRD2Q5VT52 1461 aaKnown RBP12.72□□□□□ -0.37
UBA1-203ENST00000377351 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
UBA1-203ENST00000377351 PPP4R2Q9NY27 417 aa12.72□□□□□ -0.37
UBA1-203ENST00000377351 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
UBA1-203ENST00000377351 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
UBA1-203ENST00000377351 EFCAB2Q5VUJ9 269 aa12.71□□□□□ -0.37
UBA1-203ENST00000377351 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.37
UBA1-203ENST00000377351 MYO5CQ9NQX4 1742 aa12.71□□□□□ -0.37
UBA1-203ENST00000377351 GSE1Q14687 1217 aa12.71□□□□□ -0.37
UBA1-203ENST00000377351 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
UBA1-203ENST00000377351 PLCH2O75038 1416 aa12.69□□□□□ -0.38
UBA1-203ENST00000377351 HSPA5P11021 654 aaKnown RBP12.68□□□□□ -0.38
UBA1-203ENST00000377351 PLEKHH2Q8IVE3 1493 aa12.68□□□□□ -0.38
UBA1-203ENST00000377351 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBA1-203ENST00000377351 NBPF8Q3BBV2 869 aa12.67□□□□□ -0.38
UBA1-203ENST00000377351 FAM43AQ8N2R8 423 aa12.67□□□□□ -0.38
UBA1-203ENST00000377351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.381e-6■■□□□ 11.9
UBA1-203ENST00000377351 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
UBA1-203ENST00000377351 ARID3AQ99856 593 aa12.67□□□□□ -0.38
UBA1-203ENST00000377351 TEX14Q8IWB6 1497 aa12.65□□□□□ -0.38
UBA1-203ENST00000377351 WASHC2AQ641Q2 1341 aa12.65□□□□□ -0.38
UBA1-203ENST00000377351 ARHGEF12Q9NZN5 1544 aa12.65□□□□□ -0.38
UBA1-203ENST00000377351 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
UBA1-203ENST00000377351 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBA1-203ENST00000377351 BRD2P25440 801 aaKnown RBP12.63□□□□□ -0.39
UBA1-203ENST00000377351 WDR7Q9Y4E6 1490 aa12.63□□□□□ -0.39
UBA1-203ENST00000377351 MAST1Q9Y2H9 1570 aa12.62□□□□□ -0.39
UBA1-203ENST00000377351 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
UBA1-203ENST00000377351 KDM5DQ9BY66 1539 aa12.62□□□□□ -0.39
UBA1-203ENST00000377351 TRAPPC8Q9Y2L5 1435 aa12.62□□□□□ -0.39
UBA1-203ENST00000377351 SPAG9O60271 1321 aaKnown RBP12.61□□□□□ -0.39
UBA1-203ENST00000377351 FRAT1Q92837 279 aaPredicted RBP12.61□□□□□ -0.39
UBA1-203ENST00000377351 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
UBA1-203ENST00000377351 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
UBA1-203ENST00000377351 CDK11BP21127 795 aaKnown RBP12.6□□□□□ -0.39
UBA1-203ENST00000377351 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
UBA1-203ENST00000377351 ABCC1P33527 1531 aa12.6□□□□□ -0.39
UBA1-203ENST00000377351 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
UBA1-203ENST00000377351 PLXNC1O60486 1568 aa12.58□□□□□ -0.4
UBA1-203ENST00000377351 DUOX2Q9NRD8 1548 aa12.58□□□□□ -0.4
UBA1-203ENST00000377351 WASHC2CQ9Y4E1 1318 aa12.58□□□□□ -0.4
UBA1-203ENST00000377351 ZHX1Q9UKY1 873 aaPredicted RBP12.57□□□□□ -0.4
UBA1-203ENST00000377351 FANCAO15360 1455 aa12.57□□□□□ -0.4
UBA1-203ENST00000377351 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
UBA1-203ENST00000377351 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
UBA1-203ENST00000377351 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
UBA1-203ENST00000377351 ARAP3Q8WWN8 1544 aa12.56□□□□□ -0.4
UBA1-203ENST00000377351 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
UBA1-203ENST00000377351 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
UBA1-203ENST00000377351 ERBINQ96RT1 1412 aa12.55□□□□□ -0.4
UBA1-203ENST00000377351 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
UBA1-203ENST00000377351 UNC13BO14795 1591 aa12.54□□□□□ -0.4
UBA1-203ENST00000377351 C14orf37Q86TY3 774 aa12.54□□□□□ -0.4
UBA1-203ENST00000377351 CCDC144AA2RUR9 1427 aa12.54□□□□□ -0.4
UBA1-203ENST00000377351 ABCA9Q8IUA7 1624 aa12.54□□□□□ -0.4
UBA1-203ENST00000377351 SCAPERQ9BY12 1400 aa12.53□□□□□ -0.4
UBA1-203ENST00000377351 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
UBA1-203ENST00000377351 CCDC7Q96M83 1385 aa12.53□□□□□ -0.4
UBA1-203ENST00000377351 ADGRL1O94910 1474 aa12.52□□□□□ -0.4
UBA1-203ENST00000377351 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.4
UBA1-203ENST00000377351 RTEL1-TNFRSF6BF6WH68 1400 aa12.52□□□□□ -0.41
UBA1-203ENST00000377351 SPATA31E1Q6ZUB1 1445 aa12.52□□□□□ -0.41
UBA1-203ENST00000377351 CARD11Q9BXL7 1154 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms