RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 ERBINQ96RT1 1412 aa41.32■■■■■ 4.2
COMMD3-201ENST00000376836 EIF2AK4Q9P2K8 1649 aaKnown RBP41.31■■■■■ 4.2
COMMD3-201ENST00000376836 WASHC2CQ9Y4E1 1318 aa41.29■■■■■ 4.2
COMMD3-201ENST00000376836 ZMYM3Q14202 1370 aa41.29■■■■■ 4.2
COMMD3-201ENST00000376836 CLTCQ00610 1675 aaKnown RBP41.25■■■■■ 4.19
COMMD3-201ENST00000376836 MROH2AA6NES4 1674 aa41.25■■■■■ 4.19
COMMD3-201ENST00000376836 PTPRKQ15262 1439 aa41.24■■■■■ 4.19
COMMD3-201ENST00000376836 FAM135AQ9P2D6 1515 aa41.22■■■■■ 4.19
COMMD3-201ENST00000376836 ROCK1Q13464 1354 aa41.21■■■■■ 4.19
COMMD3-201ENST00000376836 ILDR1Q86SU0 546 aaPredicted RBP41.21■■■■■ 4.19
COMMD3-201ENST00000376836 C3P01024 1663 aa41.21■■■■■ 4.19
COMMD3-201ENST00000376836 RNF17Q9BXT8 1623 aaKnown RBP41.2■■■■■ 4.19
COMMD3-201ENST00000376836 KDM5DQ9BY66 1539 aa41.2■■■■■ 4.19
COMMD3-201ENST00000376836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP41.15■■■■■ 4.18
COMMD3-201ENST00000376836 ANKRD50Q9ULJ7 1429 aa41.14■■■■■ 4.18
COMMD3-201ENST00000376836 KANK1Q14678 1352 aa41.13■■■■■ 4.17
COMMD3-201ENST00000376836 NPATQ14207 1427 aa41.1■■■■■ 4.17
COMMD3-201ENST00000376836 UHRF1BP1Q6BDS2 1440 aa41.06■■■■■ 4.16
COMMD3-201ENST00000376836 LMTK3Q96Q04 1460 aa41.05■■■■■ 4.16
COMMD3-201ENST00000376836 ZC3H13Q5T200 1668 aaKnown RBP41.05■■■■■ 4.16
COMMD3-201ENST00000376836 MROH1Q8NDA8 1641 aa41.04■■■■■ 4.16
COMMD3-201ENST00000376836 ABCC3O15438 1527 aa41.04■■■■■ 4.16
COMMD3-201ENST00000376836 PREX1Q8TCU6 1659 aa41.03■■■■■ 4.16
COMMD3-201ENST00000376836 PRDM15P57071 1507 aaPredicted RBP41.03■■■■■ 4.16
COMMD3-201ENST00000376836 SETD1BQ9UPS6 1966 aaKnown RBP41.02■■■■■ 4.16
COMMD3-201ENST00000376836 DEPDC5O75140 1603 aa41■■■■■ 4.15
COMMD3-201ENST00000376836 PZPP20742 1482 aa40.98■■■■■ 4.15
COMMD3-201ENST00000376836 FBXO31Q5XUX0 539 aaPredicted RBP40.94■■■■■ 4.15
COMMD3-201ENST00000376836 HSPA2P54652 639 aa40.93■■■■■ 4.14
COMMD3-201ENST00000376836 CEP152O94986 1710 aa40.92■■■■■ 4.14
COMMD3-201ENST00000376836 TNRQ92752 1358 aa40.88■■■■■ 4.14
COMMD3-201ENST00000376836 CAMSAP1Q5T5Y3 1602 aa40.88■■■■■ 4.13
COMMD3-201ENST00000376836 LMTK2Q8IWU2 1503 aa40.84■■■■■ 4.13
COMMD3-201ENST00000376836 ARHGAP31Q2M1Z3 1444 aa40.84■■■■■ 4.13
COMMD3-201ENST00000376836 VWDEQ8N2E2 1590 aa40.83■■■■■ 4.13
COMMD3-201ENST00000376836 NAIPQ13075 1403 aa40.8■■■■■ 4.12
COMMD3-201ENST00000376836 UNC13BO14795 1591 aa40.79■■■■■ 4.12
COMMD3-201ENST00000376836 MYO3AQ8NEV4 1616 aa40.79■■■■■ 4.12
COMMD3-201ENST00000376836 HFM1A2PYH4 1435 aa40.78■■■■■ 4.12
COMMD3-201ENST00000376836 NUP155O75694 1391 aa40.77■■■■■ 4.12
COMMD3-201ENST00000376836 ERVK-7P63135 1459 aa40.76■■■■■ 4.12
COMMD3-201ENST00000376836 SPATA31D1Q6ZQQ2 1576 aa40.73■■■■■ 4.11
COMMD3-201ENST00000376836 GCC2Q8IWJ2 1684 aa40.72■■■■■ 4.11
COMMD3-201ENST00000376836 CEP170BQ9Y4F5 1589 aaPredicted RBP40.72■■■■■ 4.11
COMMD3-201ENST00000376836 A2ML1A8K2U0 1454 aa40.72■■■■■ 4.11
COMMD3-201ENST00000376836 NLRP1Q9C000 1473 aa40.72■■■■■ 4.11
COMMD3-201ENST00000376836 EFCAB6Q5THR3 1501 aa40.69■■■■■ 4.1
COMMD3-201ENST00000376836 ZNF142P52746 1687 aaPredicted RBP40.68■■■■■ 4.1
COMMD3-201ENST00000376836 TET3O43151 1660 aa40.64■■■■■ 4.1
COMMD3-201ENST00000376836 CFAP65Q6ZU64 1925 aaKnown RBP40.64■■■■■ 4.1
COMMD3-201ENST00000376836 IQGAP3Q86VI3 1631 aa40.63■■■■■ 4.1
COMMD3-201ENST00000376836 RPRD2Q5VT52 1461 aaKnown RBP40.63■■■■■ 4.1
COMMD3-201ENST00000376836 THEMISQ8N1K5 641 aaPredicted RBP40.63■■■■■ 4.09
COMMD3-201ENST00000376836 TRIM52Q96A61 297 aa40.63■■■■■ 4.09
COMMD3-201ENST00000376836 DMRT2Q9Y5R5 561 aa40.63■■■■■ 4.09
COMMD3-201ENST00000376836 UGGT1Q9NYU2 1555 aa40.56■■■■■ 4.08
COMMD3-201ENST00000376836 STAG3Q9UJ98 1225 aa40.53■■■■■ 4.08
COMMD3-201ENST00000376836 NOS1P29475 1434 aa40.53■■■■■ 4.08
COMMD3-201ENST00000376836 PLA2R1Q13018 1463 aa40.52■■■■■ 4.08
COMMD3-201ENST00000376836 PKD2Q13563 968 aa40.52■■■■■ 4.08
COMMD3-201ENST00000376836 SLC52A1Q9NWF4 448 aa40.51■■■■■ 4.08
COMMD3-201ENST00000376836 ACIN1Q9UKV3 1341 aaKnown RBP40.51■■■■■ 4.08
COMMD3-201ENST00000376836 NCKAP5LQ9HCH0 1330 aa40.48■■■■■ 4.07
COMMD3-201ENST00000376836 SETD5Q9C0A6 1442 aa40.47■■■■■ 4.07
COMMD3-201ENST00000376836 STRCQ7RTU9 1775 aa40.47■■■■■ 4.07
COMMD3-201ENST00000376836 IDI1Q13907 227 aa40.46■■■■■ 4.07
COMMD3-201ENST00000376836 E9PCH4 1651 aa40.45■■■■■ 4.07
COMMD3-201ENST00000376836 ANKLE2Q86XL3 938 aa40.44■■■■■ 4.06
COMMD3-201ENST00000376836 SYNMO15061 1565 aa40.43■■■■■ 4.06
COMMD3-201ENST00000376836 SLC4A1APQ9BWU0 796 aaKnown RBP40.42■■■■■ 4.06
COMMD3-201ENST00000376836 PTPRTO14522 1441 aa40.41■■■■■ 4.06
COMMD3-201ENST00000376836 FBXO41Q8TF61 875 aa40.39■■■■■ 4.06
COMMD3-201ENST00000376836 PIK3C2BO00750 1634 aa40.36■■■■■ 4.05
COMMD3-201ENST00000376836 UBR1Q8IWV7 1749 aa40.36■■■■■ 4.05
COMMD3-201ENST00000376836 EID1Q9Y6B2 187 aa40.31■■■■■ 4.04
COMMD3-201ENST00000376836 RAB3GAP2Q9H2M9 1393 aa40.3■■■■■ 4.04
COMMD3-201ENST00000376836 CHGAP10645 457 aaKnown RBP40.29■■■■■ 4.04
COMMD3-201ENST00000376836 KDM5AP29375 1690 aaKnown RBP40.28■■■■■ 4.04
COMMD3-201ENST00000376836 ADGRB3O60242 1522 aa40.27■■■■■ 4.04
COMMD3-201ENST00000376836 TXNDC2Q86VQ3 553 aa40.26■■■■■ 4.04
COMMD3-201ENST00000376836 MPHOSPH9Q99550 1183 aa40.26■■■■■ 4.04
COMMD3-201ENST00000376836 TMEM2Q9UHN6 1383 aa40.25■■■■■ 4.03
COMMD3-201ENST00000376836 POLR1AO95602 1720 aaPredicted RBP40.25■■■■■ 4.03
COMMD3-201ENST00000376836 SLIT1O75093 1534 aa40.23■■■■■ 4.03
COMMD3-201ENST00000376836 SPHKAPQ2M3C7 1700 aa40.22■■■■■ 4.03
COMMD3-201ENST00000376836 ARHGAP23Q9P227 1491 aa40.21■■■■■ 4.03
COMMD3-201ENST00000376836 HDGFP51858 240 aaKnown RBP40.2■■■■■ 4.03
COMMD3-201ENST00000376836 HRCP23327 699 aa40.19■■■■■ 4.02
COMMD3-201ENST00000376836 NPHP4O75161 1426 aaPredicted RBP40.19■■■■■ 4.02
COMMD3-201ENST00000376836 SCAF11Q99590 1463 aaKnown RBP40.18■■■■■ 4.02
COMMD3-201ENST00000376836 MED14O60244 1454 aa40.17■■■■■ 4.02
COMMD3-201ENST00000376836 NEURL4Q96JN8 1562 aa40.16■■■■■ 4.02
COMMD3-201ENST00000376836 LTKP29376 864 aa40.16■■■■■ 4.02
COMMD3-201ENST00000376836 TRPM2O94759 1503 aa40.14■■■■■ 4.02
COMMD3-201ENST00000376836 TMEM131LA2VDJ0 1609 aa40.12■■■■■ 4.01
COMMD3-201ENST00000376836 FOXD1Q16676 465 aa40.12■■■■■ 4.01
COMMD3-201ENST00000376836 PPP1R15AO75807 674 aaPredicted RBP40.09■■■■■ 4.01
COMMD3-201ENST00000376836 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.09■■■■■ 4.01
COMMD3-201ENST00000376836 RIMS2Q9UQ26 1411 aa40.06■■■■■ 4
COMMD3-201ENST00000376836 ZNF326Q5BKZ1 582 aaKnown RBP40.06■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms