RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
DDR1-227ENST00000376570 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
DDR1-227ENST00000376570 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
DDR1-227ENST00000376570 SLC4A3P48751 1232 aa15.36■□□□□ 0.05
DDR1-227ENST00000376570 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
DDR1-227ENST00000376570 APAF1O14727 1248 aa15.35■□□□□ 0.05
DDR1-227ENST00000376570 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
DDR1-227ENST00000376570 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
DDR1-227ENST00000376570 CAMSAP2Q08AD1 1489 aa15.35■□□□□ 0.05
DDR1-227ENST00000376570 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
DDR1-227ENST00000376570 ARHGAP5Q13017 1502 aa15.34■□□□□ 0.05
DDR1-227ENST00000376570 CUL7Q14999 1698 aa15.34■□□□□ 0.05
DDR1-227ENST00000376570 MSH5O43196 834 aa15.34■□□□□ 0.05
DDR1-227ENST00000376570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.34■□□□□ 0.05
DDR1-227ENST00000376570 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
DDR1-227ENST00000376570 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
DDR1-227ENST00000376570 TCERG1O14776 1098 aaKnown RBP15.32■□□□□ 0.04
DDR1-227ENST00000376570 KDM6BO15054 1643 aa15.32■□□□□ 0.04
DDR1-227ENST00000376570 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
DDR1-227ENST00000376570 MINK1Q8N4C8 1332 aaPredicted RBP15.32■□□□□ 0.04
DDR1-227ENST00000376570 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
DDR1-227ENST00000376570 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
DDR1-227ENST00000376570 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDR1-227ENST00000376570 MIA2Q96PC5 1412 aa15.31■□□□□ 0.04
DDR1-227ENST00000376570 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
DDR1-227ENST00000376570 CRBNQ96SW2 442 aa15.3■□□□□ 0.04
DDR1-227ENST00000376570 GPATCH8Q9UKJ3 1502 aaKnown RBP15.3■□□□□ 0.04
DDR1-227ENST00000376570 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
DDR1-227ENST00000376570 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
DDR1-227ENST00000376570 SLC12A5Q9H2X9 1139 aa15.29■□□□□ 0.04
DDR1-227ENST00000376570 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
DDR1-227ENST00000376570 ELL2O00472 640 aaPredicted RBP15.29■□□□□ 0.04
DDR1-227ENST00000376570 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
DDR1-227ENST00000376570 KANK1Q14678 1352 aa15.28■□□□□ 0.04
DDR1-227ENST00000376570 RALBP1Q15311 655 aa15.28■□□□□ 0.04
DDR1-227ENST00000376570 CABP2Q9NPB3 220 aa15.28■□□□□ 0.04
DDR1-227ENST00000376570 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.04
DDR1-227ENST00000376570 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
DDR1-227ENST00000376570 SYNJ2O15056 1496 aa15.27■□□□□ 0.04
DDR1-227ENST00000376570 ATP10BO94823 1461 aa15.27■□□□□ 0.03
DDR1-227ENST00000376570 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.03
DDR1-227ENST00000376570 NEFMP07197 916 aa15.26■□□□□ 0.03
DDR1-227ENST00000376570 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
DDR1-227ENST00000376570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.26■□□□□ 0.03
DDR1-227ENST00000376570 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
DDR1-227ENST00000376570 FBLN1P23142 703 aa15.25■□□□□ 0.03
DDR1-227ENST00000376570 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
DDR1-227ENST00000376570 DISP1Q96F81 1524 aa15.24■□□□□ 0.03
DDR1-227ENST00000376570 CDCA8Q53HL2 280 aa15.24■□□□□ 0.03
DDR1-227ENST00000376570 GGNBP2Q9H3C7 697 aa15.24■□□□□ 0.03
DDR1-227ENST00000376570 RSPH4AQ5TD94 716 aa15.23■□□□□ 0.03
DDR1-227ENST00000376570 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
DDR1-227ENST00000376570 C20orf194Q5TEA3 1177 aa15.23■□□□□ 0.03
DDR1-227ENST00000376570 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
DDR1-227ENST00000376570 LMOD2Q6P5Q4 547 aa15.22■□□□□ 0.03
DDR1-227ENST00000376570 APBB1O00213 710 aa15.21■□□□□ 0.03
DDR1-227ENST00000376570 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.02
DDR1-227ENST00000376570 COG6Q9Y2V7 657 aa15.2■□□□□ 0.02
DDR1-227ENST00000376570 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
DDR1-227ENST00000376570 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
DDR1-227ENST00000376570 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
DDR1-227ENST00000376570 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.19■□□□□ 0.02
DDR1-227ENST00000376570 GOLGA2Q08379 1002 aa15.19■□□□□ 0.02
DDR1-227ENST00000376570 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
DDR1-227ENST00000376570 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
DDR1-227ENST00000376570 BCAR3O75815 825 aa15.18■□□□□ 0.02
DDR1-227ENST00000376570 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
DDR1-227ENST00000376570 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
DDR1-227ENST00000376570 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
DDR1-227ENST00000376570 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.17■□□□□ 0.02
DDR1-227ENST00000376570 ADAMTS12P58397 1594 aa15.17■□□□□ 0.02
DDR1-227ENST00000376570 WDR62O43379 1518 aa15.17■□□□□ 0.02
DDR1-227ENST00000376570 ABCA5Q8WWZ7 1642 aa15.16■□□□□ 0.02
DDR1-227ENST00000376570 PANK1Q8TE04 598 aa15.16■□□□□ 0.02
DDR1-227ENST00000376570 ROCK1Q13464 1354 aa15.16■□□□□ 0.02
DDR1-227ENST00000376570 KIF14Q15058 1648 aa15.16■□□□□ 0.02
DDR1-227ENST00000376570 FBXO31Q5XUX0 539 aaPredicted RBP15.15■□□□□ 0.02
DDR1-227ENST00000376570 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
DDR1-227ENST00000376570 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
DDR1-227ENST00000376570 TPRNQ4KMQ1 711 aa15.15■□□□□ 0.02
DDR1-227ENST00000376570 HMOX1P09601 288 aa15.14■□□□□ 0.01
DDR1-227ENST00000376570 MTHFSP49914 203 aa15.14■□□□□ 0.01
DDR1-227ENST00000376570 RAPGEF6Q8TEU7 1601 aa15.13■□□□□ 0.01
DDR1-227ENST00000376570 TARBP1Q13395 1621 aaKnown RBP15.12■□□□□ 0.01
DDR1-227ENST00000376570 ZNF428Q96B54 188 aa15.12■□□□□ 0.01
DDR1-227ENST00000376570 KIAA0556O60303 1618 aa15.12■□□□□ 0.01
DDR1-227ENST00000376570 RBM33Q96EV2 1170 aaKnown RBP15.12■□□□□ 0.01
DDR1-227ENST00000376570 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
DDR1-227ENST00000376570 PZPP20742 1482 aa15.11■□□□□ 0.01
DDR1-227ENST00000376570 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
DDR1-227ENST00000376570 TRAPPC8Q9Y2L5 1435 aa15.11■□□□□ 0.01
DDR1-227ENST00000376570 TSR2Q969E8 191 aaKnown RBP15.1■□□□□ 0.01
DDR1-227ENST00000376570 SLKQ9H2G2 1235 aaPredicted RBP15.1■□□□□ 0.01
DDR1-227ENST00000376570 CENPJQ9HC77 1338 aaPredicted RBP15.1■□□□□ 0.01
DDR1-227ENST00000376570 PDE4AP27815 886 aa15.09■□□□□ 0.01
DDR1-227ENST00000376570 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
DDR1-227ENST00000376570 SYCP2Q9BX26 1530 aa15.08■□□□□ 0
DDR1-227ENST00000376570 SAMD9Q5K651 1589 aa15.07■□□□□ 0
DDR1-227ENST00000376570 WAPLQ7Z5K2 1190 aa15.07■□□□□ 0
DDR1-227ENST00000376570 ITPRIPQ8IWB1 547 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms