RNA–Protein interactions for RNA: ENST00000375638.7

C6orf48-203, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-203ENST00000375638 ERBINQ96RT1 1412 aa26.49■■□□□ 1.83
C6orf48-203ENST00000375638 ROCK1Q13464 1354 aa26.49■■□□□ 1.83
C6orf48-203ENST00000375638 CEBPAP49715 358 aaPredicted RBP26.47■■□□□ 1.83
C6orf48-203ENST00000375638 WASHC2CQ9Y4E1 1318 aa26.45■■□□□ 1.83
C6orf48-203ENST00000375638 EIF2AK4Q9P2K8 1649 aaKnown RBP26.45■■□□□ 1.82
C6orf48-203ENST00000375638 ZMYM3Q14202 1370 aa26.43■■□□□ 1.82
C6orf48-203ENST00000375638 ANKRD50Q9ULJ7 1429 aa26.42■■□□□ 1.82
C6orf48-203ENST00000375638 RNF17Q9BXT8 1623 aaKnown RBP26.39■■□□□ 1.82
C6orf48-203ENST00000375638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.39■■□□□ 1.821e-10■□□□□ 10.7
C6orf48-203ENST00000375638 CLTCQ00610 1675 aaKnown RBP26.38■■□□□ 1.81
C6orf48-203ENST00000375638 KDM5DQ9BY66 1539 aa26.37■■□□□ 1.81
C6orf48-203ENST00000375638 FAM135AQ9P2D6 1515 aa26.37■■□□□ 1.81
C6orf48-203ENST00000375638 MROH2AA6NES4 1674 aa26.34■■□□□ 1.81
C6orf48-203ENST00000375638 KANK1Q14678 1352 aa26.34■■□□□ 1.81
C6orf48-203ENST00000375638 C3P01024 1663 aa26.33■■□□□ 1.81
C6orf48-203ENST00000375638 MROH1Q8NDA8 1641 aa26.32■■□□□ 1.8
C6orf48-203ENST00000375638 ABCC3O15438 1527 aa26.3■■□□□ 1.8
C6orf48-203ENST00000375638 PRDM15P57071 1507 aaPredicted RBP26.3■■□□□ 1.8
C6orf48-203ENST00000375638 NPATQ14207 1427 aa26.29■■□□□ 1.8
C6orf48-203ENST00000375638 DEPDC5O75140 1603 aa26.28■■□□□ 1.8
C6orf48-203ENST00000375638 NAIPQ13075 1403 aa26.26■■□□□ 1.79
C6orf48-203ENST00000375638 ZC3H13Q5T200 1668 aaKnown RBP26.25■■□□□ 1.79
C6orf48-203ENST00000375638 FBXO31Q5XUX0 539 aaPredicted RBP26.25■■□□□ 1.79
C6orf48-203ENST00000375638 PZPP20742 1482 aa26.24■■□□□ 1.79
C6orf48-203ENST00000375638 HFM1A2PYH4 1435 aa26.24■■□□□ 1.79
C6orf48-203ENST00000375638 SETD1BQ9UPS6 1966 aaKnown RBP26.24■■□□□ 1.79
C6orf48-203ENST00000375638 LMTK3Q96Q04 1460 aa26.22■■□□□ 1.79
C6orf48-203ENST00000375638 UHRF1BP1Q6BDS2 1440 aa26.22■■□□□ 1.79
C6orf48-203ENST00000375638 VWDEQ8N2E2 1590 aa26.2■■□□□ 1.79
C6orf48-203ENST00000375638 CEP152O94986 1710 aa26.19■■□□□ 1.78
C6orf48-203ENST00000375638 NUP155O75694 1391 aa26.19■■□□□ 1.78
C6orf48-203ENST00000375638 LMTK2Q8IWU2 1503 aa26.19■■□□□ 1.78
C6orf48-203ENST00000375638 ARHGAP31Q2M1Z3 1444 aa26.18■■□□□ 1.78
C6orf48-203ENST00000375638 TNRQ92752 1358 aa26.18■■□□□ 1.78
C6orf48-203ENST00000375638 PREX1Q8TCU6 1659 aa26.17■■□□□ 1.78
C6orf48-203ENST00000375638 CAMSAP1Q5T5Y3 1602 aa26.17■■□□□ 1.78
C6orf48-203ENST00000375638 UNC13BO14795 1591 aa26.16■■□□□ 1.78
C6orf48-203ENST00000375638 HSPA2P54652 639 aa26.16■■□□□ 1.78
C6orf48-203ENST00000375638 GCC2Q8IWJ2 1684 aa26.14■■□□□ 1.78
C6orf48-203ENST00000375638 ERVK-7P63135 1459 aa26.11■■□□□ 1.77
C6orf48-203ENST00000375638 TRIM52Q96A61 297 aa26.1■■□□□ 1.77
C6orf48-203ENST00000375638 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
C6orf48-203ENST00000375638 SPATA31D1Q6ZQQ2 1576 aa26.08■■□□□ 1.77
C6orf48-203ENST00000375638 IQGAP3Q86VI3 1631 aa26.06■■□□□ 1.76
C6orf48-203ENST00000375638 MYO3AQ8NEV4 1616 aa26.06■■□□□ 1.76
C6orf48-203ENST00000375638 SETD5Q9C0A6 1442 aa26.05■■□□□ 1.76
C6orf48-203ENST00000375638 RPRD2Q5VT52 1461 aaKnown RBP26.05■■□□□ 1.76
C6orf48-203ENST00000375638 NLRP1Q9C000 1473 aa26.05■■□□□ 1.76
C6orf48-203ENST00000375638 TET3O43151 1660 aa26.05■■□□□ 1.76
C6orf48-203ENST00000375638 A2ML1A8K2U0 1454 aa26.04■■□□□ 1.76
C6orf48-203ENST00000375638 CFAP65Q6ZU64 1925 aaKnown RBP26.04■■□□□ 1.76
C6orf48-203ENST00000375638 CEP170BQ9Y4F5 1589 aaPredicted RBP26.03■■□□□ 1.76
C6orf48-203ENST00000375638 ACIN1Q9UKV3 1341 aaKnown RBP26.01■■□□□ 1.75
C6orf48-203ENST00000375638 NOS1P29475 1434 aa26■■□□□ 1.75
C6orf48-203ENST00000375638 THEMISQ8N1K5 641 aaPredicted RBP25.98■■□□□ 1.75
C6orf48-203ENST00000375638 SLC4A1APQ9BWU0 796 aaKnown RBP25.98■■□□□ 1.75
C6orf48-203ENST00000375638 ZNF142P52746 1687 aaPredicted RBP25.98■■□□□ 1.75
C6orf48-203ENST00000375638 SLC52A1Q9NWF4 448 aa25.97■■□□□ 1.75
C6orf48-203ENST00000375638 IDI1Q13907 227 aa25.96■■□□□ 1.75
C6orf48-203ENST00000375638 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.75
C6orf48-203ENST00000375638 E9PCH4 1651 aa25.94■■□□□ 1.74
C6orf48-203ENST00000375638 UGGT1Q9NYU2 1555 aa25.94■■□□□ 1.74
C6orf48-203ENST00000375638 PKD2Q13563 968 aa25.93■■□□□ 1.74
C6orf48-203ENST00000375638 STAG3Q9UJ98 1225 aa25.93■■□□□ 1.74
C6orf48-203ENST00000375638 SYNMO15061 1565 aa25.92■■□□□ 1.74
C6orf48-203ENST00000375638 DMRT2Q9Y5R5 561 aa25.91■■□□□ 1.74
C6orf48-203ENST00000375638 MPHOSPH9Q99550 1183 aa25.9■■□□□ 1.74
C6orf48-203ENST00000375638 PLA2R1Q13018 1463 aa25.9■■□□□ 1.74
C6orf48-203ENST00000375638 HRCP23327 699 aa25.89■■□□□ 1.74
C6orf48-203ENST00000375638 NCKAP5LQ9HCH0 1330 aa25.88■■□□□ 1.73
C6orf48-203ENST00000375638 TRIM26Q12899 539 aaPredicted RBP25.87■■□□□ 1.73
C6orf48-203ENST00000375638 ANKLE2Q86XL3 938 aa25.86■■□□□ 1.73
C6orf48-203ENST00000375638 PTPRTO14522 1441 aa25.86■■□□□ 1.73
C6orf48-203ENST00000375638 STRCQ7RTU9 1775 aa25.84■■□□□ 1.73
C6orf48-203ENST00000375638 PIK3C2BO00750 1634 aa25.84■■□□□ 1.73
C6orf48-203ENST00000375638 CHGAP10645 457 aaKnown RBP25.82■■□□□ 1.72
C6orf48-203ENST00000375638 FOXD1Q16676 465 aa25.82■■□□□ 1.72
C6orf48-203ENST00000375638 UBR1Q8IWV7 1749 aa25.82■■□□□ 1.72
C6orf48-203ENST00000375638 EID1Q9Y6B2 187 aa25.79■■□□□ 1.72
C6orf48-203ENST00000375638 TMEM2Q9UHN6 1383 aa25.79■■□□□ 1.72
C6orf48-203ENST00000375638 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
C6orf48-203ENST00000375638 TXNDC2Q86VQ3 553 aa25.78■■□□□ 1.72
C6orf48-203ENST00000375638 SPHKAPQ2M3C7 1700 aa25.77■■□□□ 1.72
C6orf48-203ENST00000375638 KDM5AP29375 1690 aaKnown RBP25.77■■□□□ 1.72
C6orf48-203ENST00000375638 SLIT1O75093 1534 aa25.76■■□□□ 1.71
C6orf48-203ENST00000375638 TRPM2O94759 1503 aa25.76■■□□□ 1.71
C6orf48-203ENST00000375638 ARHGAP23Q9P227 1491 aa25.75■■□□□ 1.71
C6orf48-203ENST00000375638 LTKP29376 864 aa25.74■■□□□ 1.71
C6orf48-203ENST00000375638 HDGFP51858 240 aaKnown RBP25.72■■□□□ 1.71
C6orf48-203ENST00000375638 SCAF11Q99590 1463 aaKnown RBP25.72■■□□□ 1.71
C6orf48-203ENST00000375638 TMEM131LA2VDJ0 1609 aa25.71■■□□□ 1.71
C6orf48-203ENST00000375638 NPHP4O75161 1426 aaPredicted RBP25.71■■□□□ 1.71
C6orf48-203ENST00000375638 MED14O60244 1454 aa25.7■■□□□ 1.7
C6orf48-203ENST00000375638 NEURL4Q96JN8 1562 aa25.69■■□□□ 1.7
C6orf48-203ENST00000375638 POLR1AO95602 1720 aaPredicted RBP25.68■■□□□ 1.7
C6orf48-203ENST00000375638 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
C6orf48-203ENST00000375638 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
C6orf48-203ENST00000375638 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.67■■□□□ 1.72e-28■■□□□ 14
C6orf48-203ENST00000375638 RIMS2Q9UQ26 1411 aa25.67■■□□□ 1.7
C6orf48-203ENST00000375638 CCDC144AA2RUR9 1427 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms