RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 BCAR3O75815 825 aa17.73■□□□□ 0.43
MCF2L-204ENST00000375608 ABCC5O15440 1437 aa17.73■□□□□ 0.43
MCF2L-204ENST00000375608 RNF123Q5XPI4 1314 aa17.73■□□□□ 0.43
MCF2L-204ENST00000375608 KDM6BO15054 1643 aa17.72■□□□□ 0.43
MCF2L-204ENST00000375608 HSP90AA1P07900 732 aaKnown RBP17.72■□□□□ 0.43
MCF2L-204ENST00000375608 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-204ENST00000375608 EPRSP07814 1512 aaKnown RBP17.71■□□□□ 0.43
MCF2L-204ENST00000375608 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.42
MCF2L-204ENST00000375608 ANKRD50Q9ULJ7 1429 aa17.71■□□□□ 0.42
MCF2L-204ENST00000375608 KIAA1107Q9UPP5 1409 aa17.7■□□□□ 0.42
MCF2L-204ENST00000375608 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
MCF2L-204ENST00000375608 MIA2Q96PC5 1412 aa17.69■□□□□ 0.42
MCF2L-204ENST00000375608 POGKQ9P215 609 aa17.68■□□□□ 0.42
MCF2L-204ENST00000375608 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
MCF2L-204ENST00000375608 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
MCF2L-204ENST00000375608 SPATA31E1Q6ZUB1 1445 aa17.65■□□□□ 0.42
MCF2L-204ENST00000375608 UGGT2Q9NYU1 1516 aa17.65■□□□□ 0.42
MCF2L-204ENST00000375608 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
MCF2L-204ENST00000375608 DENND4BO75064 1496 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-204ENST00000375608 MAGI3Q5TCQ9 1506 aa17.64■□□□□ 0.41
MCF2L-204ENST00000375608 CCDC144AA2RUR9 1427 aa17.63■□□□□ 0.41
MCF2L-204ENST00000375608 MFAP1P55081 439 aaKnown RBP17.63■□□□□ 0.41
MCF2L-204ENST00000375608 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
MCF2L-204ENST00000375608 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
MCF2L-204ENST00000375608 FTSJ3Q8IY81 847 aaKnown RBP17.61■□□□□ 0.41
MCF2L-204ENST00000375608 TEX14Q8IWB6 1497 aa17.61■□□□□ 0.41
MCF2L-204ENST00000375608 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
MCF2L-204ENST00000375608 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
MCF2L-204ENST00000375608 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
MCF2L-204ENST00000375608 CENPJQ9HC77 1338 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-204ENST00000375608 ROCK1Q13464 1354 aa17.58■□□□□ 0.41
MCF2L-204ENST00000375608 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.4
MCF2L-204ENST00000375608 CDCA8Q53HL2 280 aa17.57■□□□□ 0.4
MCF2L-204ENST00000375608 C8orf34Q49A92 452 aa17.57■□□□□ 0.4
MCF2L-204ENST00000375608 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
MCF2L-204ENST00000375608 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
MCF2L-204ENST00000375608 TRIM44Q96DX7 344 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-204ENST00000375608 WASHC2CQ9Y4E1 1318 aa17.56■□□□□ 0.4
MCF2L-204ENST00000375608 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
MCF2L-204ENST00000375608 IGHDP01880 384 aa17.55■□□□□ 0.4
MCF2L-204ENST00000375608 L1TD1Q5T7N2 865 aaKnown RBP17.55■□□□□ 0.4
MCF2L-204ENST00000375608 SEC24BO95487 1268 aa17.55■□□□□ 0.4
MCF2L-204ENST00000375608 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
MCF2L-204ENST00000375608 SAFB2Q14151 953 aaKnown RBP eCLIP17.54■□□□□ 0.4
MCF2L-204ENST00000375608 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
MCF2L-204ENST00000375608 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
MCF2L-204ENST00000375608 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
MCF2L-204ENST00000375608 GLIPR1L2Q4G1C9 344 aa17.53■□□□□ 0.4
MCF2L-204ENST00000375608 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-204ENST00000375608 NCLP19338 710 aaKnown RBP17.53■□□□□ 0.4
MCF2L-204ENST00000375608 RSPH6AQ9H0K4 717 aa17.53■□□□□ 0.4
MCF2L-204ENST00000375608 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-204ENST00000375608 HECW1Q76N89 1606 aa17.52■□□□□ 0.4
MCF2L-204ENST00000375608 E9PSI1 815 aa17.5■□□□□ 0.39
MCF2L-204ENST00000375608 PZPP20742 1482 aa17.5■□□□□ 0.39
MCF2L-204ENST00000375608 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
MCF2L-204ENST00000375608 CUL7Q14999 1698 aa17.49■□□□□ 0.39
MCF2L-204ENST00000375608 U2AF1L5P0DN76 240 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-204ENST00000375608 U2AF1Q01081 240 aaKnown RBP eCLIP17.49■□□□□ 0.39
MCF2L-204ENST00000375608 SLFN5Q08AF3 891 aa17.49■□□□□ 0.39
MCF2L-204ENST00000375608 PLEKHH1Q9ULM0 1364 aa17.48■□□□□ 0.39
MCF2L-204ENST00000375608 ARID3AQ99856 593 aa17.48■□□□□ 0.39
MCF2L-204ENST00000375608 CAMSAP2Q08AD1 1489 aa17.48■□□□□ 0.39
MCF2L-204ENST00000375608 C9orf84Q5VXU9 1444 aa17.48■□□□□ 0.39
MCF2L-204ENST00000375608 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
MCF2L-204ENST00000375608 ITPRIPQ8IWB1 547 aa17.48■□□□□ 0.39
MCF2L-204ENST00000375608 HSCBQ8IWL3 235 aa17.48■□□□□ 0.39
MCF2L-204ENST00000375608 VSIG10Q8N0Z9 540 aa17.48■□□□□ 0.39
MCF2L-204ENST00000375608 CGNL1Q0VF96 1302 aa17.47■□□□□ 0.39
MCF2L-204ENST00000375608 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
MCF2L-204ENST00000375608 TPRNQ4KMQ1 711 aa17.47■□□□□ 0.39
MCF2L-204ENST00000375608 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-204ENST00000375608 PARD3Q8TEW0 1356 aa17.46■□□□□ 0.39
MCF2L-204ENST00000375608 CTTNBP2Q8WZ74 1663 aa17.46■□□□□ 0.39
MCF2L-204ENST00000375608 PLB1Q6P1J6 1458 aa17.46■□□□□ 0.39
MCF2L-204ENST00000375608 TROQ12816 1431 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-204ENST00000375608 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-204ENST00000375608 PDZRN3Q9UPQ7 1066 aa17.46■□□□□ 0.39
MCF2L-204ENST00000375608 TNNQ9UQP3 1299 aa17.46■□□□□ 0.39
MCF2L-204ENST00000375608 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.39
MCF2L-204ENST00000375608 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.38
MCF2L-204ENST00000375608 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
MCF2L-204ENST00000375608 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
MCF2L-204ENST00000375608 TRAK1Q9UPV9 953 aa17.44■□□□□ 0.38
MCF2L-204ENST00000375608 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
MCF2L-204ENST00000375608 TESK2Q96S53 571 aa17.44■□□□□ 0.38
MCF2L-204ENST00000375608 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
MCF2L-204ENST00000375608 SMC4Q9NTJ3 1288 aa17.44■□□□□ 0.38
MCF2L-204ENST00000375608 ERBINQ96RT1 1412 aa17.43■□□□□ 0.38
MCF2L-204ENST00000375608 CFAP53Q96M91 514 aa17.43■□□□□ 0.38
MCF2L-204ENST00000375608 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
MCF2L-204ENST00000375608 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-204ENST00000375608 KDM2BQ8NHM5 1336 aa17.42■□□□□ 0.38
MCF2L-204ENST00000375608 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
MCF2L-204ENST00000375608 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
MCF2L-204ENST00000375608 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
MCF2L-204ENST00000375608 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
MCF2L-204ENST00000375608 TCP11L2Q8N4U5 519 aa17.4■□□□□ 0.38
MCF2L-204ENST00000375608 RALGAPBQ86X10 1494 aa17.39■□□□□ 0.38
MCF2L-204ENST00000375608 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms