RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 HECW2Q9P2P5 1572 aa27.7■■■□□ 2.02
NECAB3-202ENST00000375238 RPRD2Q5VT52 1461 aaKnown RBP27.69■■■□□ 2.02
NECAB3-202ENST00000375238 PPP1R15AO75807 674 aaPredicted RBP27.69■■■□□ 2.02
NECAB3-202ENST00000375238 MLH3Q9UHC1 1453 aa27.68■■■□□ 2.02
NECAB3-202ENST00000375238 KIF13AQ9H1H9 1805 aa27.67■■■□□ 2.02
NECAB3-202ENST00000375238 PPRC1Q5VV67 1664 aaKnown RBP27.67■■■□□ 2.02
NECAB3-202ENST00000375238 DHX29Q7Z478 1369 aaKnown RBP27.66■■■□□ 2.02
NECAB3-202ENST00000375238 RICTORQ6R327 1708 aa27.65■■■□□ 2.02
NECAB3-202ENST00000375238 RAPGEF3O95398 923 aa27.65■■■□□ 2.02
NECAB3-202ENST00000375238 YTHDC1Q96MU7 727 aaKnown RBP27.65■■■□□ 2.02
NECAB3-202ENST00000375238 EIF2AK4Q9P2K8 1649 aaKnown RBP27.65■■■□□ 2.02
NECAB3-202ENST00000375238 DEPDC5O75140 1603 aa27.63■■■□□ 2.01
NECAB3-202ENST00000375238 TEX14Q8IWB6 1497 aa27.63■■■□□ 2.01
NECAB3-202ENST00000375238 A2MP01023 1474 aa27.6■■■□□ 2.01
NECAB3-202ENST00000375238 ABCA6Q8N139 1617 aa27.6■■■□□ 2.01
NECAB3-202ENST00000375238 KIF3BO15066 747 aa27.59■■■□□ 2.01
NECAB3-202ENST00000375238 GTF3C3Q9Y5Q9 886 aa27.58■■■□□ 2.01
NECAB3-202ENST00000375238 FRMPD1Q5SYB0 1578 aa27.56■■■□□ 2
NECAB3-202ENST00000375238 L3MBTL2Q969R5 705 aa27.55■■■□□ 2
NECAB3-202ENST00000375238 KANK1Q14678 1352 aa27.53■■■□□ 2
NECAB3-202ENST00000375238 DIP2CQ9Y2E4 1556 aa27.52■■■□□ 2
NECAB3-202ENST00000375238 PRDM15P57071 1507 aaPredicted RBP27.52■■■□□ 2
NECAB3-202ENST00000375238 MROH1Q8NDA8 1641 aa27.52■■■□□ 2
NECAB3-202ENST00000375238 VWDEQ8N2E2 1590 aa27.5■■□□□ 1.99
NECAB3-202ENST00000375238 TET3O43151 1660 aa27.49■■□□□ 1.99
NECAB3-202ENST00000375238 RNF17Q9BXT8 1623 aaKnown RBP27.49■■□□□ 1.99
NECAB3-202ENST00000375238 ZMYM4Q5VZL5 1548 aa27.48■■□□□ 1.99
NECAB3-202ENST00000375238 E9PCH4 1651 aa27.48■■□□□ 1.99
NECAB3-202ENST00000375238 BCORL1Q5H9F3 1711 aa27.46■■□□□ 1.99
NECAB3-202ENST00000375238 CCDC144AA2RUR9 1427 aa27.46■■□□□ 1.99
NECAB3-202ENST00000375238 YEATS2Q9ULM3 1422 aa27.46■■□□□ 1.99
NECAB3-202ENST00000375238 PLA2R1Q13018 1463 aa27.45■■□□□ 1.99
NECAB3-202ENST00000375238 ATP10AO60312 1499 aa27.42■■□□□ 1.98
NECAB3-202ENST00000375238 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
NECAB3-202ENST00000375238 CEP152O94986 1710 aa27.4■■□□□ 1.98
NECAB3-202ENST00000375238 SPHKAPQ2M3C7 1700 aa27.38■■□□□ 1.97
NECAB3-202ENST00000375238 GGT6Q6P531 493 aa27.37■■□□□ 1.97
NECAB3-202ENST00000375238 EFCAB6Q5THR3 1501 aa27.36■■□□□ 1.97
NECAB3-202ENST00000375238 LMTK2Q8IWU2 1503 aa27.36■■□□□ 1.97
NECAB3-202ENST00000375238 NBPF8Q3BBV2 869 aa27.34■■□□□ 1.97
NECAB3-202ENST00000375238 TRPM2O94759 1503 aa27.34■■□□□ 1.97
NECAB3-202ENST00000375238 COL17A1Q9UMD9 1497 aaPredicted RBP27.33■■□□□ 1.97
NECAB3-202ENST00000375238 PTPRTO14522 1441 aa27.31■■□□□ 1.96
NECAB3-202ENST00000375238 DDX10Q13206 875 aaKnown RBP27.31■■□□□ 1.96
NECAB3-202ENST00000375238 ZNF326Q5BKZ1 582 aaKnown RBP27.28■■□□□ 1.96
NECAB3-202ENST00000375238 HIRIP3Q9BW71 556 aaPredicted RBP27.28■■□□□ 1.96
NECAB3-202ENST00000375238 ABCC3O15438 1527 aa27.28■■□□□ 1.96
NECAB3-202ENST00000375238 WASHC2CQ9Y4E1 1318 aa27.27■■□□□ 1.96
NECAB3-202ENST00000375238 DCAF11Q8TEB1 546 aa27.27■■□□□ 1.96
NECAB3-202ENST00000375238 CLTCL1P53675 1640 aa27.26■■□□□ 1.95
NECAB3-202ENST00000375238 RGL3Q3MIN7 710 aa27.26■■□□□ 1.95
NECAB3-202ENST00000375238 REREQ9P2R6 1566 aa27.26■■□□□ 1.95
NECAB3-202ENST00000375238 KDM2AQ9Y2K7 1162 aa27.25■■□□□ 1.95
NECAB3-202ENST00000375238 UHRF1BP1Q6BDS2 1440 aa27.24■■□□□ 1.95
NECAB3-202ENST00000375238 CAMSAP1Q5T5Y3 1602 aa27.24■■□□□ 1.95
NECAB3-202ENST00000375238 ARHGEF40Q8TER5 1519 aa27.24■■□□□ 1.95
NECAB3-202ENST00000375238 ZC3H13Q5T200 1668 aaKnown RBP27.23■■□□□ 1.95
NECAB3-202ENST00000375238 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
NECAB3-202ENST00000375238 NPATQ14207 1427 aa27.2■■□□□ 1.95
NECAB3-202ENST00000375238 EIF4G2P78344 907 aaKnown RBP eCLIP27.2■■□□□ 1.942e-6■■■■□ 22.4
NECAB3-202ENST00000375238 CFAP65Q6ZU64 1925 aaKnown RBP27.19■■□□□ 1.94
NECAB3-202ENST00000375238 AGLP35573 1532 aa27.19■■□□□ 1.94
NECAB3-202ENST00000375238 SPATA31E1Q6ZUB1 1445 aa27.19■■□□□ 1.94
NECAB3-202ENST00000375238 HSPA5P11021 654 aaKnown RBP27.18■■□□□ 1.94
NECAB3-202ENST00000375238 UGGT1Q9NYU2 1555 aa27.16■■□□□ 1.94
NECAB3-202ENST00000375238 RALGAPBQ86X10 1494 aa27.16■■□□□ 1.94
NECAB3-202ENST00000375238 SIGLEC1Q9BZZ2 1709 aa27.16■■□□□ 1.94
NECAB3-202ENST00000375238 KIF1BO60333 1816 aa27.14■■□□□ 1.94
NECAB3-202ENST00000375238 PRAG1Q86YV5 1406 aa27.13■■□□□ 1.93
NECAB3-202ENST00000375238 CNTLNQ9NXG0 1405 aa27.11■■□□□ 1.93
NECAB3-202ENST00000375238 ARHGAP31Q2M1Z3 1444 aa27.1■■□□□ 1.93
NECAB3-202ENST00000375238 NEURL4Q96JN8 1562 aa27.09■■□□□ 1.93
NECAB3-202ENST00000375238 TRPM1Q7Z4N2 1603 aa27.09■■□□□ 1.93
NECAB3-202ENST00000375238 NOS1P29475 1434 aa27.05■■□□□ 1.92
NECAB3-202ENST00000375238 MROH2AA6NES4 1674 aa27.05■■□□□ 1.92
NECAB3-202ENST00000375238 CARD11Q9BXL7 1154 aa27.04■■□□□ 1.92
NECAB3-202ENST00000375238 PPP6R1Q9UPN7 881 aa27.04■■□□□ 1.92
NECAB3-202ENST00000375238 USP47Q96K76 1375 aa27.04■■□□□ 1.92
NECAB3-202ENST00000375238 MLECQ14165 292 aa27.04■■□□□ 1.92
NECAB3-202ENST00000375238 ROCK2O75116 1388 aaKnown RBP27.04■■□□□ 1.92
NECAB3-202ENST00000375238 CLTCQ00610 1675 aaKnown RBP27.03■■□□□ 1.92
NECAB3-202ENST00000375238 SYNMO15061 1565 aa27.03■■□□□ 1.92
NECAB3-202ENST00000375238 CCER2I3L3R5 266 aa27.02■■□□□ 1.92
NECAB3-202ENST00000375238 PREX1Q8TCU6 1659 aa27.01■■□□□ 1.91
NECAB3-202ENST00000375238 MADDQ8WXG6 1647 aa27.01■■□□□ 1.91
NECAB3-202ENST00000375238 ADGRB3O60242 1522 aa27.01■■□□□ 1.91
NECAB3-202ENST00000375238 PIK3C2BO00750 1634 aa27■■□□□ 1.91
NECAB3-202ENST00000375238 ANP32CO43423 234 aa27■■□□□ 1.91
NECAB3-202ENST00000375238 CHGAP10645 457 aaKnown RBP27■■□□□ 1.91
NECAB3-202ENST00000375238 STAC3Q96MF2 364 aa27■■□□□ 1.91
NECAB3-202ENST00000375238 IFT172Q9UG01 1749 aa26.97■■□□□ 1.91
NECAB3-202ENST00000375238 ARID4BQ4LE39 1312 aaPredicted RBP26.97■■□□□ 1.91
NECAB3-202ENST00000375238 NBPF1Q3BBV0 1214 aa26.95■■□□□ 1.9
NECAB3-202ENST00000375238 WASHC2AQ641Q2 1341 aa26.95■■□□□ 1.9
NECAB3-202ENST00000375238 LAMC1P11047 1609 aa26.95■■□□□ 1.9
NECAB3-202ENST00000375238 GPRASP1Q5JY77 1395 aa26.94■■□□□ 1.9
NECAB3-202ENST00000375238 POLR1AO95602 1720 aaPredicted RBP26.94■■□□□ 1.9
NECAB3-202ENST00000375238 MYOM2P54296 1465 aa26.93■■□□□ 1.9
NECAB3-202ENST00000375238 PELP1Q8IZL8 1130 aaKnown RBP26.92■■□□□ 1.9
NECAB3-202ENST00000375238 ERVK-7P63135 1459 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms