RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 HECW2Q9P2P5 1572 aa24.07■■□□□ 1.44
PTPN20-203ENST00000374342 DIP2BQ9P265 1576 aa24.06■■□□□ 1.44
PTPN20-203ENST00000374342 E9PCH4 1651 aa24.02■■□□□ 1.44
PTPN20-203ENST00000374342 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
PTPN20-203ENST00000374342 ABCA6Q8N139 1617 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 TET3O43151 1660 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 RICTORQ6R327 1708 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 MIER1Q8N108 512 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 PRDM15P57071 1507 aaPredicted RBP23.99■■□□□ 1.43
PTPN20-203ENST00000374342 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
PTPN20-203ENST00000374342 CCDC144AA2RUR9 1427 aa23.98■■□□□ 1.43
PTPN20-203ENST00000374342 DHX29Q7Z478 1369 aaKnown RBP23.98■■□□□ 1.43
PTPN20-203ENST00000374342 TSPOAP1O95153 1857 aa23.97■■□□□ 1.43
PTPN20-203ENST00000374342 VWDEQ8N2E2 1590 aa23.97■■□□□ 1.43
PTPN20-203ENST00000374342 MLH3Q9UHC1 1453 aa23.97■■□□□ 1.43
PTPN20-203ENST00000374342 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
PTPN20-203ENST00000374342 PLA2R1Q13018 1463 aa23.96■■□□□ 1.43
PTPN20-203ENST00000374342 SPHKAPQ2M3C7 1700 aa23.96■■□□□ 1.43
PTPN20-203ENST00000374342 A2MP01023 1474 aa23.95■■□□□ 1.42
PTPN20-203ENST00000374342 RNF17Q9BXT8 1623 aaKnown RBP23.95■■□□□ 1.42
PTPN20-203ENST00000374342 FRMPD1Q5SYB0 1578 aa23.94■■□□□ 1.42
PTPN20-203ENST00000374342 PPRC1Q5VV67 1664 aaKnown RBP23.93■■□□□ 1.42
PTPN20-203ENST00000374342 KANK1Q14678 1352 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 ATP10AO60312 1499 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 CEP152O94986 1710 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 KIF3BO15066 747 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 DIP2CQ9Y2E4 1556 aa23.9■■□□□ 1.42
PTPN20-203ENST00000374342 BCORL1Q5H9F3 1711 aa23.9■■□□□ 1.42
PTPN20-203ENST00000374342 HSPA5P11021 654 aaKnown RBP23.89■■□□□ 1.42
PTPN20-203ENST00000374342 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.42
PTPN20-203ENST00000374342 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
PTPN20-203ENST00000374342 TRPM2O94759 1503 aa23.88■■□□□ 1.41
PTPN20-203ENST00000374342 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
PTPN20-203ENST00000374342 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
PTPN20-203ENST00000374342 UHRF1BP1Q6BDS2 1440 aa23.88■■□□□ 1.41
PTPN20-203ENST00000374342 RAPGEF3O95398 923 aa23.86■■□□□ 1.41
PTPN20-203ENST00000374342 EFCAB6Q5THR3 1501 aa23.86■■□□□ 1.41
PTPN20-203ENST00000374342 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
PTPN20-203ENST00000374342 POLR1AO95602 1720 aaPredicted RBP23.85■■□□□ 1.41
PTPN20-203ENST00000374342 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
PTPN20-203ENST00000374342 CLTCL1P53675 1640 aa23.84■■□□□ 1.41
PTPN20-203ENST00000374342 ZMYM4Q5VZL5 1548 aa23.81■■□□□ 1.4
PTPN20-203ENST00000374342 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 KDM2AQ9Y2K7 1162 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 PTPRTO14522 1441 aa23.79■■□□□ 1.4
PTPN20-203ENST00000374342 SPATA31E1Q6ZUB1 1445 aa23.77■■□□□ 1.4
PTPN20-203ENST00000374342 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
PTPN20-203ENST00000374342 YEATS2Q9ULM3 1422 aa23.76■■□□□ 1.39
PTPN20-203ENST00000374342 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
PTPN20-203ENST00000374342 CAMSAP1Q5T5Y3 1602 aa23.74■■□□□ 1.39
PTPN20-203ENST00000374342 USP47Q96K76 1375 aa23.74■■□□□ 1.39
PTPN20-203ENST00000374342 KIF1BO60333 1816 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 ABCC3O15438 1527 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 WASHC2AQ641Q2 1341 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 UGGT1Q9NYU2 1555 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 ZC3H13Q5T200 1668 aaKnown RBP23.71■■□□□ 1.39
PTPN20-203ENST00000374342 YTHDC1Q96MU7 727 aaKnown RBP23.7■■□□□ 1.38
PTPN20-203ENST00000374342 GGT6Q6P531 493 aa23.69■■□□□ 1.38
PTPN20-203ENST00000374342 CFAP65Q6ZU64 1925 aaKnown RBP23.68■■□□□ 1.38
PTPN20-203ENST00000374342 MADDQ8WXG6 1647 aa23.68■■□□□ 1.38
PTPN20-203ENST00000374342 MROH2AA6NES4 1674 aa23.68■■□□□ 1.38
PTPN20-203ENST00000374342 LAMC1P11047 1609 aa23.68■■□□□ 1.38
PTPN20-203ENST00000374342 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
PTPN20-203ENST00000374342 CCDC7Q96M83 1385 aa23.67■■□□□ 1.38
PTPN20-203ENST00000374342 CARD11Q9BXL7 1154 aa23.67■■□□□ 1.38
PTPN20-203ENST00000374342 NEURL4Q96JN8 1562 aa23.66■■□□□ 1.38
PTPN20-203ENST00000374342 NPATQ14207 1427 aa23.65■■□□□ 1.38
PTPN20-203ENST00000374342 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.37
PTPN20-203ENST00000374342 C11orf95C9JLR9 678 aaPredicted RBP23.63■■□□□ 1.37
PTPN20-203ENST00000374342 IFT172Q9UG01 1749 aa23.63■■□□□ 1.37
PTPN20-203ENST00000374342 CNTLNQ9NXG0 1405 aa23.62■■□□□ 1.37
PTPN20-203ENST00000374342 WASHC2CQ9Y4E1 1318 aa23.61■■□□□ 1.37
PTPN20-203ENST00000374342 REREQ9P2R6 1566 aa23.61■■□□□ 1.37
PTPN20-203ENST00000374342 CENPBP07199 599 aaPredicted RBP23.61■■□□□ 1.37
PTPN20-203ENST00000374342 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
PTPN20-203ENST00000374342 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
PTPN20-203ENST00000374342 GPRASP1Q5JY77 1395 aa23.58■■□□□ 1.37
PTPN20-203ENST00000374342 ANP32CO43423 234 aa23.58■■□□□ 1.37
PTPN20-203ENST00000374342 ADGRB3O60242 1522 aa23.58■■□□□ 1.37
PTPN20-203ENST00000374342 SYNMO15061 1565 aa23.55■■□□□ 1.36
PTPN20-203ENST00000374342 COL17A1Q9UMD9 1497 aaPredicted RBP23.55■■□□□ 1.36
PTPN20-203ENST00000374342 NBPF1Q3BBV0 1214 aa23.54■■□□□ 1.36
PTPN20-203ENST00000374342 PIK3C2BO00750 1634 aa23.54■■□□□ 1.36
PTPN20-203ENST00000374342 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 IQGAP1P46940 1657 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 AGLP35573 1532 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 MYOM2P54296 1465 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 PREX1Q8TCU6 1659 aa23.52■■□□□ 1.36
PTPN20-203ENST00000374342 PPLO60437 1756 aa23.51■■□□□ 1.35
PTPN20-203ENST00000374342 ST20-MTHFSA0A0A6YYL1 179 aa23.51■■□□□ 1.35
PTPN20-203ENST00000374342 NOS1P29475 1434 aa23.5■■□□□ 1.35
PTPN20-203ENST00000374342 ARHGAP31Q2M1Z3 1444 aa23.5■■□□□ 1.35
PTPN20-203ENST00000374342 CLTCQ00610 1675 aaKnown RBP23.49■■□□□ 1.35
PTPN20-203ENST00000374342 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
PTPN20-203ENST00000374342 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
PTPN20-203ENST00000374342 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.35
PTPN20-203ENST00000374342 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
PTPN20-203ENST00000374342 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms