RNA–Protein interactions for RNA: ENST00000373956.7

PCDH15-204, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,931 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-204ENST00000373956 CALD1Q05682 793 aaKnown RBP8.41□□□□□ -1.06
PCDH15-204ENST00000373956 TRIM34Q9BYJ4 488 aa8.41□□□□□ -1.06
PCDH15-204ENST00000373956 ZNF592Q92610 1267 aa8.41□□□□□ -1.06
PCDH15-204ENST00000373956 SLC4A10Q6U841 1118 aa8.4□□□□□ -1.06
PCDH15-204ENST00000373956 CUX1P39880 1505 aa8.4□□□□□ -1.06
PCDH15-204ENST00000373956 DCAF11Q8TEB1 546 aa8.4□□□□□ -1.06
PCDH15-204ENST00000373956 GPS2Q13227 327 aa8.4□□□□□ -1.06
PCDH15-204ENST00000373956 SPAG9O60271 1321 aaKnown RBP8.4□□□□□ -1.07
PCDH15-204ENST00000373956 CWC22Q9HCG8 908 aaKnown RBP8.4□□□□□ -1.07
PCDH15-204ENST00000373956 TPM1P09493 284 aa8.4□□□□□ -1.07
PCDH15-204ENST00000373956 FBXW7Q969H0 707 aa8.4□□□□□ -1.07
PCDH15-204ENST00000373956 PMFBP1Q8TBY8 1022 aa8.39□□□□□ -1.07
PCDH15-204ENST00000373956 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.39□□□□□ -1.07
PCDH15-204ENST00000373956 STK31Q9BXU1 1019 aa8.39□□□□□ -1.07
PCDH15-204ENST00000373956 ABCA5Q8WWZ7 1642 aa8.39□□□□□ -1.07
PCDH15-204ENST00000373956 SIN3AQ96ST3 1273 aa8.39□□□□□ -1.07
PCDH15-204ENST00000373956 KTN1Q86UP2 1357 aaKnown RBP8.39□□□□□ -1.07
PCDH15-204ENST00000373956 AKAP17AQ02040 695 aaKnown RBP8.38□□□□□ -1.07
PCDH15-204ENST00000373956 GOLGA6L19H0YKK7 550 aa8.38□□□□□ -1.07
PCDH15-204ENST00000373956 TARBP1Q13395 1621 aaKnown RBP8.38□□□□□ -1.07
PCDH15-204ENST00000373956 MSH5O43196 834 aa8.38□□□□□ -1.07
PCDH15-204ENST00000373956 HSP90AA2PQ14568 343 aaPredicted RBP8.38□□□□□ -1.07
PCDH15-204ENST00000373956 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
PCDH15-204ENST00000373956 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
PCDH15-204ENST00000373956 FAM184AQ8NB25 1140 aa8.37□□□□□ -1.07
PCDH15-204ENST00000373956 RBM19Q9Y4C8 960 aaKnown RBP8.37□□□□□ -1.07
PCDH15-204ENST00000373956 TCERG1O14776 1098 aaKnown RBP8.37□□□□□ -1.07
PCDH15-204ENST00000373956 ERICH3Q5RHP9 1530 aa8.37□□□□□ -1.07
PCDH15-204ENST00000373956 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
PCDH15-204ENST00000373956 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
PCDH15-204ENST00000373956 PRXQ9BXM0 1461 aa8.36□□□□□ -1.07
PCDH15-204ENST00000373956 U2AF1L5P0DN76 240 aaPredicted RBP8.36□□□□□ -1.07
PCDH15-204ENST00000373956 U2AF1Q01081 240 aaKnown RBP eCLIP8.36□□□□□ -1.07
PCDH15-204ENST00000373956 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
PCDH15-204ENST00000373956 THOC2Q8NI27 1593 aaKnown RBP8.36□□□□□ -1.07
PCDH15-204ENST00000373956 HMMRO75330 724 aa8.36□□□□□ -1.07
PCDH15-204ENST00000373956 ST18O60284 1047 aa8.36□□□□□ -1.07
PCDH15-204ENST00000373956 AMOTL1Q8IY63 956 aa8.35□□□□□ -1.07
PCDH15-204ENST00000373956 RILPL2Q969X0 211 aa8.35□□□□□ -1.07
PCDH15-204ENST00000373956 NOL10Q9BSC4 688 aaKnown RBP8.35□□□□□ -1.07
PCDH15-204ENST00000373956 NAP1L1P55209 391 aaKnown RBP8.35□□□□□ -1.07
PCDH15-204ENST00000373956 GOLGA3Q08378 1498 aa8.35□□□□□ -1.07
PCDH15-204ENST00000373956 AK7Q96M32 723 aa8.35□□□□□ -1.07
PCDH15-204ENST00000373956 TEX35Q5T0J7 233 aa8.35□□□□□ -1.07
PCDH15-204ENST00000373956 RUFY1Q96T51 708 aa8.35□□□□□ -1.07
PCDH15-204ENST00000373956 CCDC146Q8IYE0 955 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 BCL11BQ9C0K0 894 aaPredicted RBP8.34□□□□□ -1.07
PCDH15-204ENST00000373956 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.34□□□□□ -1.07
PCDH15-204ENST00000373956 SYNE3Q6ZMZ3 975 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 RCAN3Q9UKA8 241 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 KIF3AQ9Y496 699 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 WDR62O43379 1518 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 EEA1Q15075 1411 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 BECN2A8MW95 431 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 MAP7D2Q96T17 732 aa8.34□□□□□ -1.07
PCDH15-204ENST00000373956 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 DHX16O60231 1041 aaKnown RBP8.33□□□□□ -1.08
PCDH15-204ENST00000373956 HSP90AB2PQ58FF8 381 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 SAMD1Q6SPF0 538 aaPredicted RBP8.33□□□□□ -1.08
PCDH15-204ENST00000373956 CCDC47Q96A33 483 aaKnown RBP8.33□□□□□ -1.08
PCDH15-204ENST00000373956 DNMBPQ6XZF7 1577 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 TRIM29Q14134 588 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 LTV1Q96GA3 475 aaPredicted RBP8.33□□□□□ -1.08
PCDH15-204ENST00000373956 FOSBP53539 338 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 ROCK2O75116 1388 aaKnown RBP8.33□□□□□ -1.08
PCDH15-204ENST00000373956 CCNB3Q8WWL7 1395 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 ODF2Q5BJF6 829 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 SKIDA1Q1XH10 827 aa8.33□□□□□ -1.08
PCDH15-204ENST00000373956 CCDC43Q96MW1 224 aaKnown RBP8.33□□□□□ -1.08
PCDH15-204ENST00000373956 CT47A1Q5JQC4 288 aaPredicted RBP8.32□□□□□ -1.08
PCDH15-204ENST00000373956 ABCA10Q8WWZ4 1543 aa8.32□□□□□ -1.08
PCDH15-204ENST00000373956 ANO2Q9NQ90 1003 aa8.32□□□□□ -1.08
PCDH15-204ENST00000373956 VSIG10Q8N0Z9 540 aa8.31□□□□□ -1.08
PCDH15-204ENST00000373956 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
PCDH15-204ENST00000373956 HOMER1Q86YM7 354 aa8.31□□□□□ -1.08
PCDH15-204ENST00000373956 CEP162Q5TB80 1403 aa8.31□□□□□ -1.08
PCDH15-204ENST00000373956 HSPA5P11021 654 aaKnown RBP8.31□□□□□ -1.08
PCDH15-204ENST00000373956 KLHL34Q8N239 644 aa8.31□□□□□ -1.08
PCDH15-204ENST00000373956 WRNQ14191 1432 aaPredicted RBP eCLIP8.31□□□□□ -1.08
PCDH15-204ENST00000373956 NOM1Q5C9Z4 860 aaKnown RBP8.31□□□□□ -1.08
PCDH15-204ENST00000373956 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
PCDH15-204ENST00000373956 ANKRD20A12PQ8NF67 263 aa8.31□□□□□ -1.08
PCDH15-204ENST00000373956 ZFYVE27Q5T4F4 411 aa8.3□□□□□ -1.08
PCDH15-204ENST00000373956 IPO7O95373 1038 aaKnown RBP8.3□□□□□ -1.08
PCDH15-204ENST00000373956 CDR1P51861 262 aa8.3□□□□□ -1.08
PCDH15-204ENST00000373956 HDAC5Q9UQL6 1122 aa8.3□□□□□ -1.08
PCDH15-204ENST00000373956 CADPSQ9ULU8 1353 aa8.3□□□□□ -1.08
PCDH15-204ENST00000373956 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
PCDH15-204ENST00000373956 MEX3CQ5U5Q3 659 aaKnown RBP8.29□□□□□ -1.08
PCDH15-204ENST00000373956 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
PCDH15-204ENST00000373956 EPS15P42566 896 aa8.29□□□□□ -1.08
PCDH15-204ENST00000373956 AMPHP49418 695 aa8.29□□□□□ -1.08
PCDH15-204ENST00000373956 GGT6Q6P531 493 aa8.29□□□□□ -1.08
PCDH15-204ENST00000373956 NFXL1Q6ZNB6 911 aa8.29□□□□□ -1.08
PCDH15-204ENST00000373956 NGEFQ8N5V2 710 aa8.29□□□□□ -1.08
PCDH15-204ENST00000373956 IPO9Q96P70 1041 aaKnown RBP8.29□□□□□ -1.08
PCDH15-204ENST00000373956 EIF3AQ14152 1382 aaKnown RBP8.29□□□□□ -1.08
PCDH15-204ENST00000373956 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
PCDH15-204ENST00000373956 HOOK1Q9UJC3 728 aaKnown RBP8.29□□□□□ -1.08
PCDH15-204ENST00000373956 CAGE1Q8TC20 777 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms