RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 IQGAP3Q86VI3 1631 aa28.04■■■□□ 2.08
SRSF4-201ENST00000373795 PLA2R1Q13018 1463 aa28.04■■■□□ 2.08
SRSF4-201ENST00000373795 CCDC144AA2RUR9 1427 aa28■■■□□ 2.07
SRSF4-201ENST00000373795 MAGI2Q86UL8 1455 aa28■■■□□ 2.07
SRSF4-201ENST00000373795 RGL3Q3MIN7 710 aa28■■■□□ 2.07
SRSF4-201ENST00000373795 UHRF1BP1Q6BDS2 1440 aa27.97■■■□□ 2.07
SRSF4-201ENST00000373795 CCER2I3L3R5 266 aa27.97■■■□□ 2.07
SRSF4-201ENST00000373795 CCDC7Q96M83 1385 aa27.97■■■□□ 2.07
SRSF4-201ENST00000373795 ATP7AQ04656 1500 aa27.96■■■□□ 2.07
SRSF4-201ENST00000373795 CD109Q6YHK3 1445 aa27.95■■■□□ 2.06
SRSF4-201ENST00000373795 USP47Q96K76 1375 aa27.93■■■□□ 2.06
SRSF4-201ENST00000373795 INO80Q9ULG1 1556 aaPredicted RBP27.93■■■□□ 2.06
SRSF4-201ENST00000373795 KIF7Q2M1P5 1343 aa27.92■■■□□ 2.06
SRSF4-201ENST00000373795 CYB5RLQ6IPT4 315 aa27.92■■■□□ 2.06
SRSF4-201ENST00000373795 KIF3BO15066 747 aa27.91■■■□□ 2.06
SRSF4-201ENST00000373795 CARD11Q9BXL7 1154 aa27.91■■■□□ 2.06
SRSF4-201ENST00000373795 RALGAPBQ86X10 1494 aa27.88■■■□□ 2.05
SRSF4-201ENST00000373795 KDM5CP41229 1560 aa27.86■■■□□ 2.05
SRSF4-201ENST00000373795 CNTLNQ9NXG0 1405 aa27.85■■■□□ 2.05
SRSF4-201ENST00000373795 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
SRSF4-201ENST00000373795 ATP10AO60312 1499 aa27.85■■■□□ 2.05
SRSF4-201ENST00000373795 E9PCH4 1651 aa27.84■■■□□ 2.05
SRSF4-201ENST00000373795 BCORL1Q5H9F3 1711 aa27.84■■■□□ 2.05
SRSF4-201ENST00000373795 KIDINS220Q9ULH0 1771 aa27.83■■■□□ 2.05
SRSF4-201ENST00000373795 DEPDC5O75140 1603 aa27.82■■■□□ 2.04
SRSF4-201ENST00000373795 A2MP01023 1474 aa27.82■■■□□ 2.04
SRSF4-201ENST00000373795 BCANQ96GW7 911 aa27.82■■■□□ 2.04
SRSF4-201ENST00000373795 ZNF518AQ6AHZ1 1483 aa27.82■■■□□ 2.04
SRSF4-201ENST00000373795 FKBP8Q14318 412 aa27.81■■■□□ 2.04
SRSF4-201ENST00000373795 POLR3GLQ9BT43 218 aa27.81■■■□□ 2.04
SRSF4-201ENST00000373795 POLR1AO95602 1720 aaPredicted RBP27.8■■■□□ 2.04
SRSF4-201ENST00000373795 PRAG1Q86YV5 1406 aa27.8■■■□□ 2.04
SRSF4-201ENST00000373795 ROCK2O75116 1388 aaKnown RBP27.79■■■□□ 2.04
SRSF4-201ENST00000373795 ST20-MTHFSA0A0A6YYL1 179 aa27.79■■■□□ 2.04
SRSF4-201ENST00000373795 NBPF1Q3BBV0 1214 aa27.79■■■□□ 2.04
SRSF4-201ENST00000373795 KANK1Q14678 1352 aa27.77■■■□□ 2.04
SRSF4-201ENST00000373795 TSHZ2Q9NRE2 1034 aa27.75■■■□□ 2.03
SRSF4-201ENST00000373795 RAPGEF3O95398 923 aa27.75■■■□□ 2.03
SRSF4-201ENST00000373795 POGZQ7Z3K3 1410 aa27.75■■■□□ 2.03
SRSF4-201ENST00000373795 CFAP74Q9C0B2 1584 aa27.74■■■□□ 2.03
SRSF4-201ENST00000373795 TRPM1Q7Z4N2 1603 aa27.73■■■□□ 2.03
SRSF4-201ENST00000373795 VWDEQ8N2E2 1590 aa27.73■■■□□ 2.03
SRSF4-201ENST00000373795 MROH1Q8NDA8 1641 aa27.72■■■□□ 2.03
SRSF4-201ENST00000373795 TET3O43151 1660 aa27.71■■■□□ 2.03
SRSF4-201ENST00000373795 RIMBP3CA6NJZ7 1639 aa27.71■■■□□ 2.03
SRSF4-201ENST00000373795 RIMBP3BA6NNM3 1639 aa27.71■■■□□ 2.03
SRSF4-201ENST00000373795 EIF2AK4Q9P2K8 1649 aaKnown RBP27.71■■■□□ 2.03
SRSF4-201ENST00000373795 RIMBP3Q9UFD9 1639 aa27.71■■■□□ 2.03
SRSF4-201ENST00000373795 PRKRIP1Q9H875 184 aaPredicted RBP27.7■■■□□ 2.03
SRSF4-201ENST00000373795 PTPRTO14522 1441 aa27.7■■■□□ 2.02
SRSF4-201ENST00000373795 SPHKAPQ2M3C7 1700 aa27.69■■■□□ 2.02
SRSF4-201ENST00000373795 TRPM2O94759 1503 aa27.68■■■□□ 2.02
SRSF4-201ENST00000373795 PRDM15P57071 1507 aaPredicted RBP27.68■■■□□ 2.02
SRSF4-201ENST00000373795 CCDC184Q52MB2 194 aa27.68■■■□□ 2.02
SRSF4-201ENST00000373795 MLH3Q9UHC1 1453 aa27.67■■■□□ 2.02
SRSF4-201ENST00000373795 CLTCL1P53675 1640 aa27.65■■■□□ 2.02
SRSF4-201ENST00000373795 CNGB1Q14028 1251 aaPredicted RBP27.65■■■□□ 2.02
SRSF4-201ENST00000373795 GGT6Q6P531 493 aa27.65■■■□□ 2.02
SRSF4-201ENST00000373795 NEO1Q92859 1461 aa27.64■■■□□ 2.02
SRSF4-201ENST00000373795 NEFLP07196 543 aa27.64■■■□□ 2.02
SRSF4-201ENST00000373795 ARID4BQ4LE39 1312 aaPredicted RBP27.64■■■□□ 2.01
SRSF4-201ENST00000373795 HECW2Q9P2P5 1572 aa27.63■■■□□ 2.01
SRSF4-201ENST00000373795 FRMPD1Q5SYB0 1578 aa27.61■■■□□ 2.01
SRSF4-201ENST00000373795 GPRASP1Q5JY77 1395 aa27.61■■■□□ 2.01
SRSF4-201ENST00000373795 CEP152O94986 1710 aa27.6■■■□□ 2.01
SRSF4-201ENST00000373795 MAP3K4Q9Y6R4 1608 aa27.59■■■□□ 2.01
SRSF4-201ENST00000373795 MYT1Q01538 1121 aa27.59■■■□□ 2.01
SRSF4-201ENST00000373795 ABCA6Q8N139 1617 aa27.59■■■□□ 2.01
SRSF4-201ENST00000373795 UGGT1Q9NYU2 1555 aa27.58■■■□□ 2.01
SRSF4-201ENST00000373795 FAM69CQ0P6D2 419 aa27.58■■■□□ 2.01
SRSF4-201ENST00000373795 HNRNPUQ00839 825 aaKnown RBP eCLIP27.57■■■□□ 2
SRSF4-201ENST00000373795 PPRC1Q5VV67 1664 aaKnown RBP27.56■■■□□ 2
SRSF4-201ENST00000373795 EFCAB6Q5THR3 1501 aa27.55■■■□□ 2
SRSF4-201ENST00000373795 CFAP65Q6ZU64 1925 aaKnown RBP27.55■■■□□ 2
SRSF4-201ENST00000373795 RNF17Q9BXT8 1623 aaKnown RBP27.55■■■□□ 2
SRSF4-201ENST00000373795 MRS2Q9HD23 443 aa27.51■■□□□ 1.99
SRSF4-201ENST00000373795 WASHC2CQ9Y4E1 1318 aa27.51■■□□□ 1.99
SRSF4-201ENST00000373795 MADDQ8WXG6 1647 aa27.51■■□□□ 1.99
SRSF4-201ENST00000373795 LMTK2Q8IWU2 1503 aa27.5■■□□□ 1.99
SRSF4-201ENST00000373795 TESK2Q96S53 571 aa27.5■■□□□ 1.99
SRSF4-201ENST00000373795 RICTORQ6R327 1708 aa27.5■■□□□ 1.99
SRSF4-201ENST00000373795 GLI2P10070 1586 aa27.5■■□□□ 1.99
SRSF4-201ENST00000373795 LAMC1P11047 1609 aa27.5■■□□□ 1.99
SRSF4-201ENST00000373795 FAM9BQ8IZU0 186 aa27.48■■□□□ 1.99
SRSF4-201ENST00000373795 DIP2CQ9Y2E4 1556 aa27.47■■□□□ 1.99
SRSF4-201ENST00000373795 YEATS2Q9ULM3 1422 aa27.47■■□□□ 1.99
SRSF4-201ENST00000373795 NPATQ14207 1427 aa27.46■■□□□ 1.99
SRSF4-201ENST00000373795 DISP3Q9P2K9 1392 aa27.45■■□□□ 1.98
SRSF4-201ENST00000373795 TSPOAP1O95153 1857 aa27.45■■□□□ 1.98
SRSF4-201ENST00000373795 DIP2BQ9P265 1576 aa27.44■■□□□ 1.98
SRSF4-201ENST00000373795 STAC3Q96MF2 364 aa27.44■■□□□ 1.98
SRSF4-201ENST00000373795 KIF1BO60333 1816 aa27.44■■□□□ 1.98
SRSF4-201ENST00000373795 CHGAP10645 457 aaKnown RBP27.43■■□□□ 1.98
SRSF4-201ENST00000373795 ADGRF5Q8IZF2 1346 aa27.42■■□□□ 1.98
SRSF4-201ENST00000373795 ABCC3O15438 1527 aa27.41■■□□□ 1.98
SRSF4-201ENST00000373795 MROH2AA6NES4 1674 aa27.39■■□□□ 1.97
SRSF4-201ENST00000373795 CFAP70Q5T0N1 1121 aa27.38■■□□□ 1.97
SRSF4-201ENST00000373795 COL17A1Q9UMD9 1497 aaPredicted RBP27.38■■□□□ 1.97
SRSF4-201ENST00000373795 NEURL4Q96JN8 1562 aa27.37■■□□□ 1.97
SRSF4-201ENST00000373795 TMF1P82094 1093 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms