RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 RIMS1Q86UR5 1692 aaKnown RBP28.58■■■□□ 2.17
COL16A1-201ENST00000373667 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
COL16A1-201ENST00000373667 PPP6R1Q9UPN7 881 aa28.58■■■□□ 2.17
COL16A1-201ENST00000373667 WASHC2CQ9Y4E1 1318 aa28.56■■■□□ 2.16
COL16A1-201ENST00000373667 PTPRMP28827 1452 aa28.52■■■□□ 2.16
COL16A1-201ENST00000373667 NAIPQ13075 1403 aa28.52■■■□□ 2.16
COL16A1-201ENST00000373667 RNF17Q9BXT8 1623 aaKnown RBP28.51■■■□□ 2.15
COL16A1-201ENST00000373667 CEBPAP49715 358 aaPredicted RBP28.51■■■□□ 2.15
COL16A1-201ENST00000373667 CLTCQ00610 1675 aaKnown RBP28.5■■■□□ 2.15
COL16A1-201ENST00000373667 CNTLNQ9NXG0 1405 aa28.5■■■□□ 2.15
COL16A1-201ENST00000373667 KANK1Q14678 1352 aa28.5■■■□□ 2.15
COL16A1-201ENST00000373667 HFM1A2PYH4 1435 aa28.49■■■□□ 2.15
COL16A1-201ENST00000373667 ZMYM3Q14202 1370 aa28.46■■■□□ 2.15
COL16A1-201ENST00000373667 GCC2Q8IWJ2 1684 aa28.45■■■□□ 2.15
COL16A1-201ENST00000373667 MROH1Q8NDA8 1641 aa28.45■■■□□ 2.14
COL16A1-201ENST00000373667 KDM5DQ9BY66 1539 aa28.43■■■□□ 2.14
COL16A1-201ENST00000373667 TRIM26Q12899 539 aaPredicted RBP28.43■■■□□ 2.14
COL16A1-201ENST00000373667 DEPDC5O75140 1603 aa28.43■■■□□ 2.14
COL16A1-201ENST00000373667 TRIM52Q96A61 297 aa28.41■■■□□ 2.14
COL16A1-201ENST00000373667 PRDM15P57071 1507 aaPredicted RBP28.41■■■□□ 2.14
COL16A1-201ENST00000373667 NUP155O75694 1391 aa28.39■■■□□ 2.14
COL16A1-201ENST00000373667 ABCC3O15438 1527 aa28.39■■■□□ 2.14
COL16A1-201ENST00000373667 MROH2AA6NES4 1674 aa28.39■■■□□ 2.14
COL16A1-201ENST00000373667 CEP152O94986 1710 aa28.39■■■□□ 2.14
COL16A1-201ENST00000373667 SETD5Q9C0A6 1442 aa28.39■■■□□ 2.14
COL16A1-201ENST00000373667 FAM135AQ9P2D6 1515 aa28.38■■■□□ 2.13
COL16A1-201ENST00000373667 C3P01024 1663 aa28.38■■■□□ 2.13
COL16A1-201ENST00000373667 ZC3H13Q5T200 1668 aaKnown RBP28.35■■■□□ 2.13
COL16A1-201ENST00000373667 UNC13BO14795 1591 aa28.35■■■□□ 2.13
COL16A1-201ENST00000373667 FBXO31Q5XUX0 539 aaPredicted RBP28.33■■■□□ 2.13
COL16A1-201ENST00000373667 VWDEQ8N2E2 1590 aa28.32■■■□□ 2.12
COL16A1-201ENST00000373667 CAMSAP1Q5T5Y3 1602 aa28.3■■■□□ 2.12
COL16A1-201ENST00000373667 CFAP65Q6ZU64 1925 aaKnown RBP28.28■■■□□ 2.12
COL16A1-201ENST00000373667 RAB3GAP2Q9H2M9 1393 aa28.28■■■□□ 2.12
COL16A1-201ENST00000373667 LMTK2Q8IWU2 1503 aa28.28■■■□□ 2.12
COL16A1-201ENST00000373667 PZPP20742 1482 aa28.27■■■□□ 2.12
COL16A1-201ENST00000373667 IQGAP3Q86VI3 1631 aa28.25■■■□□ 2.11
COL16A1-201ENST00000373667 NPATQ14207 1427 aa28.23■■■□□ 2.11
COL16A1-201ENST00000373667 ARHGAP31Q2M1Z3 1444 aa28.23■■■□□ 2.11
COL16A1-201ENST00000373667 ACIN1Q9UKV3 1341 aaKnown RBP28.22■■■□□ 2.11
COL16A1-201ENST00000373667 SLC4A1APQ9BWU0 796 aaKnown RBP28.22■■■□□ 2.11
COL16A1-201ENST00000373667 TET3O43151 1660 aa28.22■■■□□ 2.11
COL16A1-201ENST00000373667 SETD1BQ9UPS6 1966 aaKnown RBP28.21■■■□□ 2.11
COL16A1-201ENST00000373667 EFCAB6Q5THR3 1501 aa28.21■■■□□ 2.11
COL16A1-201ENST00000373667 TNRQ92752 1358 aa28.21■■■□□ 2.11
COL16A1-201ENST00000373667 ERVK-7P63135 1459 aa28.17■■■□□ 2.1
COL16A1-201ENST00000373667 HRCP23327 699 aa28.17■■■□□ 2.1
COL16A1-201ENST00000373667 PKD2Q13563 968 aa28.16■■■□□ 2.1
COL16A1-201ENST00000373667 MPHOSPH9Q99550 1183 aa28.15■■■□□ 2.1
COL16A1-201ENST00000373667 PREX1Q8TCU6 1659 aa28.15■■■□□ 2.1
COL16A1-201ENST00000373667 UHRF1BP1Q6BDS2 1440 aa28.15■■■□□ 2.1
COL16A1-201ENST00000373667 E9PCH4 1651 aa28.13■■■□□ 2.09
COL16A1-201ENST00000373667 SPATA31D1Q6ZQQ2 1576 aa28.12■■■□□ 2.09
COL16A1-201ENST00000373667 PCGF6Q9BYE7 350 aa28.12■■■□□ 2.09
COL16A1-201ENST00000373667 RPRD2Q5VT52 1461 aaKnown RBP28.12■■■□□ 2.09
COL16A1-201ENST00000373667 HSPA2P54652 639 aa28.08■■■□□ 2.09
COL16A1-201ENST00000373667 FOXD1Q16676 465 aa28.08■■■□□ 2.09
COL16A1-201ENST00000373667 NOS1P29475 1434 aa28.07■■■□□ 2.08
COL16A1-201ENST00000373667 MYO3AQ8NEV4 1616 aa28.07■■■□□ 2.08
COL16A1-201ENST00000373667 LMTK3Q96Q04 1460 aa28.06■■■□□ 2.08
COL16A1-201ENST00000373667 IDI1Q13907 227 aa28.04■■■□□ 2.08
COL16A1-201ENST00000373667 NLRP1Q9C000 1473 aa28.03■■■□□ 2.08
COL16A1-201ENST00000373667 SLC52A1Q9NWF4 448 aa28.03■■■□□ 2.08
COL16A1-201ENST00000373667 STAG3Q9UJ98 1225 aa28.03■■■□□ 2.08
COL16A1-201ENST00000373667 A2ML1A8K2U0 1454 aa28.02■■■□□ 2.08
COL16A1-201ENST00000373667 SYNMO15061 1565 aa28.02■■■□□ 2.08
COL16A1-201ENST00000373667 CEP170BQ9Y4F5 1589 aaPredicted RBP28.01■■■□□ 2.07
COL16A1-201ENST00000373667 CHGAP10645 457 aaKnown RBP27.99■■■□□ 2.07
COL16A1-201ENST00000373667 THEMISQ8N1K5 641 aaPredicted RBP27.98■■■□□ 2.07
COL16A1-201ENST00000373667 SPHKAPQ2M3C7 1700 aa27.98■■■□□ 2.07
COL16A1-201ENST00000373667 PTPRTO14522 1441 aa27.97■■■□□ 2.07
COL16A1-201ENST00000373667 ZNF142P52746 1687 aaPredicted RBP27.96■■■□□ 2.07
COL16A1-201ENST00000373667 UGGT1Q9NYU2 1555 aa27.95■■■□□ 2.07
COL16A1-201ENST00000373667 PIK3C2BO00750 1634 aa27.93■■■□□ 2.06
COL16A1-201ENST00000373667 PLA2R1Q13018 1463 aa27.91■■■□□ 2.06
COL16A1-201ENST00000373667 TRPM2O94759 1503 aa27.89■■■□□ 2.06
COL16A1-201ENST00000373667 UBR1Q8IWV7 1749 aa27.88■■■□□ 2.05
COL16A1-201ENST00000373667 NCKAP5LQ9HCH0 1330 aa27.86■■■□□ 2.05
COL16A1-201ENST00000373667 CLTCL1P53675 1640 aa27.85■■■□□ 2.05
COL16A1-201ENST00000373667 ANKLE2Q86XL3 938 aa27.84■■■□□ 2.05
COL16A1-201ENST00000373667 ADGRB3O60242 1522 aa27.83■■■□□ 2.05
COL16A1-201ENST00000373667 ZNF326Q5BKZ1 582 aaKnown RBP27.83■■■□□ 2.05
COL16A1-201ENST00000373667 CCDC144AA2RUR9 1427 aa27.83■■■□□ 2.05
COL16A1-201ENST00000373667 ANKRD30BQ9BXX2 1392 aa27.81■■■□□ 2.04
COL16A1-201ENST00000373667 MYO5BQ9ULV0 1848 aa27.81■■■□□ 2.04
COL16A1-201ENST00000373667 TXNDC2Q86VQ3 553 aa27.8■■■□□ 2.04
COL16A1-201ENST00000373667 EID1Q9Y6B2 187 aa27.8■■■□□ 2.04
COL16A1-201ENST00000373667 TMEM131LA2VDJ0 1609 aa27.8■■■□□ 2.04
COL16A1-201ENST00000373667 KDM5AP29375 1690 aaKnown RBP27.79■■■□□ 2.04
COL16A1-201ENST00000373667 KIF1BO60333 1816 aa27.78■■■□□ 2.04
COL16A1-201ENST00000373667 TMEM2Q9UHN6 1383 aa27.78■■■□□ 2.04
COL16A1-201ENST00000373667 DHX57Q6P158 1386 aaKnown RBP27.77■■■□□ 2.04
COL16A1-201ENST00000373667 STRCQ7RTU9 1775 aa27.76■■■□□ 2.03
COL16A1-201ENST00000373667 HDGFP51858 240 aaKnown RBP27.76■■■□□ 2.03
COL16A1-201ENST00000373667 LTKP29376 864 aa27.75■■■□□ 2.03
COL16A1-201ENST00000373667 RGL3Q3MIN7 710 aa27.75■■■□□ 2.03
COL16A1-201ENST00000373667 DMRT2Q9Y5R5 561 aa27.75■■■□□ 2.03
COL16A1-201ENST00000373667 NUTM2DQ5VT03 806 aaPredicted RBP27.74■■■□□ 2.03
COL16A1-201ENST00000373667 SLIT1O75093 1534 aa27.73■■■□□ 2.03
COL16A1-201ENST00000373667 ARHGAP23Q9P227 1491 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms