RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
HDAC1-201ENST00000373548 CFAP74Q9C0B2 1584 aa27.54■■■□□ 2
HDAC1-201ENST00000373548 ZNF326Q5BKZ1 582 aaKnown RBP27.52■■■□□ 2
HDAC1-201ENST00000373548 ATP10AO60312 1499 aa27.51■■□□□ 1.99
HDAC1-201ENST00000373548 RALGAPBQ86X10 1494 aa27.5■■□□□ 1.99
HDAC1-201ENST00000373548 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
HDAC1-201ENST00000373548 ZNF518AQ6AHZ1 1483 aa27.48■■□□□ 1.99
HDAC1-201ENST00000373548 POLR1AO95602 1720 aaPredicted RBP27.48■■□□□ 1.99
HDAC1-201ENST00000373548 EIF2AK4Q9P2K8 1649 aaKnown RBP27.47■■□□□ 1.99
HDAC1-201ENST00000373548 C11orf95C9JLR9 678 aaPredicted RBP27.47■■□□□ 1.99
HDAC1-201ENST00000373548 E9PCH4 1651 aa27.47■■□□□ 1.99
HDAC1-201ENST00000373548 ANP32CO43423 234 aa27.46■■□□□ 1.99
HDAC1-201ENST00000373548 CCDC7Q96M83 1385 aa27.45■■□□□ 1.99
HDAC1-201ENST00000373548 DCAF11Q8TEB1 546 aa27.45■■□□□ 1.98
HDAC1-201ENST00000373548 KDM5CP41229 1560 aa27.45■■□□□ 1.98
HDAC1-201ENST00000373548 DHX29Q7Z478 1369 aaKnown RBP27.45■■□□□ 1.98
HDAC1-201ENST00000373548 MYT1LQ9UL68 1186 aa27.44■■□□□ 1.98
HDAC1-201ENST00000373548 RIMBP3CA6NJZ7 1639 aa27.44■■□□□ 1.98
HDAC1-201ENST00000373548 RIMBP3BA6NNM3 1639 aa27.44■■□□□ 1.98
HDAC1-201ENST00000373548 RIMBP3Q9UFD9 1639 aa27.44■■□□□ 1.98
HDAC1-201ENST00000373548 KDM2AQ9Y2K7 1162 aa27.43■■□□□ 1.98
HDAC1-201ENST00000373548 USP47Q96K76 1375 aa27.43■■□□□ 1.98
HDAC1-201ENST00000373548 VWDEQ8N2E2 1590 aa27.43■■□□□ 1.98
HDAC1-201ENST00000373548 POGZQ7Z3K3 1410 aa27.42■■□□□ 1.98
HDAC1-201ENST00000373548 TET3O43151 1660 aa27.41■■□□□ 1.98
HDAC1-201ENST00000373548 MROH1Q8NDA8 1641 aa27.4■■□□□ 1.98
HDAC1-201ENST00000373548 CYB5RLQ6IPT4 315 aa27.4■■□□□ 1.98
HDAC1-201ENST00000373548 A2MP01023 1474 aa27.39■■□□□ 1.98
HDAC1-201ENST00000373548 PRDM15P57071 1507 aaPredicted RBP27.39■■□□□ 1.98
HDAC1-201ENST00000373548 CCER2I3L3R5 266 aa27.38■■□□□ 1.97
HDAC1-201ENST00000373548 KIF3BO15066 747 aa27.38■■□□□ 1.97
HDAC1-201ENST00000373548 CNTLNQ9NXG0 1405 aa27.38■■□□□ 1.97
HDAC1-201ENST00000373548 BCORL1Q5H9F3 1711 aa27.37■■□□□ 1.97
HDAC1-201ENST00000373548 NEO1Q92859 1461 aa27.37■■□□□ 1.97
HDAC1-201ENST00000373548 PRAG1Q86YV5 1406 aa27.36■■□□□ 1.97
HDAC1-201ENST00000373548 SPHKAPQ2M3C7 1700 aa27.36■■□□□ 1.97
HDAC1-201ENST00000373548 KANK1Q14678 1352 aa27.36■■□□□ 1.97
HDAC1-201ENST00000373548 RGL3Q3MIN7 710 aa27.36■■□□□ 1.97
HDAC1-201ENST00000373548 TRPM1Q7Z4N2 1603 aa27.36■■□□□ 1.97
HDAC1-201ENST00000373548 KIF7Q2M1P5 1343 aa27.36■■□□□ 1.97
HDAC1-201ENST00000373548 TRPM2O94759 1503 aa27.35■■□□□ 1.97
HDAC1-201ENST00000373548 MLH3Q9UHC1 1453 aa27.35■■□□□ 1.97
HDAC1-201ENST00000373548 HECW2Q9P2P5 1572 aa27.35■■□□□ 1.97
HDAC1-201ENST00000373548 MAP3K4Q9Y6R4 1608 aa27.34■■□□□ 1.97
HDAC1-201ENST00000373548 GTF3C3Q9Y5Q9 886 aa27.34■■□□□ 1.97
HDAC1-201ENST00000373548 CARD11Q9BXL7 1154 aa27.33■■□□□ 1.97
HDAC1-201ENST00000373548 PTPRTO14522 1441 aa27.33■■□□□ 1.96
HDAC1-201ENST00000373548 CEP152O94986 1710 aa27.29■■□□□ 1.96
HDAC1-201ENST00000373548 RNF17Q9BXT8 1623 aaKnown RBP27.29■■□□□ 1.96
HDAC1-201ENST00000373548 GLI2P10070 1586 aa27.29■■□□□ 1.96
HDAC1-201ENST00000373548 FRMPD1Q5SYB0 1578 aa27.29■■□□□ 1.96
HDAC1-201ENST00000373548 ROCK2O75116 1388 aaKnown RBP27.28■■□□□ 1.96
HDAC1-201ENST00000373548 CLTCL1P53675 1640 aa27.28■■□□□ 1.96
HDAC1-201ENST00000373548 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
HDAC1-201ENST00000373548 EFCAB6Q5THR3 1501 aa27.24■■□□□ 1.95
HDAC1-201ENST00000373548 RICTORQ6R327 1708 aa27.23■■□□□ 1.95
HDAC1-201ENST00000373548 LMTK2Q8IWU2 1503 aa27.22■■□□□ 1.95
HDAC1-201ENST00000373548 PPRC1Q5VV67 1664 aaKnown RBP27.22■■□□□ 1.95
HDAC1-201ENST00000373548 LAMC1P11047 1609 aa27.22■■□□□ 1.95
HDAC1-201ENST00000373548 GPRASP1Q5JY77 1395 aa27.22■■□□□ 1.95
HDAC1-201ENST00000373548 RAPGEF3O95398 923 aa27.22■■□□□ 1.95
HDAC1-201ENST00000373548 ARID4BQ4LE39 1312 aaPredicted RBP27.21■■□□□ 1.95
HDAC1-201ENST00000373548 ST20-MTHFSA0A0A6YYL1 179 aa27.19■■□□□ 1.94
HDAC1-201ENST00000373548 NBPF1Q3BBV0 1214 aa27.19■■□□□ 1.94
HDAC1-201ENST00000373548 DIP2BQ9P265 1576 aa27.18■■□□□ 1.94
HDAC1-201ENST00000373548 DIP2CQ9Y2E4 1556 aa27.17■■□□□ 1.94
HDAC1-201ENST00000373548 MADDQ8WXG6 1647 aa27.15■■□□□ 1.94
HDAC1-201ENST00000373548 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.93
HDAC1-201ENST00000373548 UGGT1Q9NYU2 1555 aa27.12■■□□□ 1.93
HDAC1-201ENST00000373548 PRKRIP1Q9H875 184 aaPredicted RBP27.12■■□□□ 1.93
HDAC1-201ENST00000373548 FAM69CQ0P6D2 419 aa27.11■■□□□ 1.93
HDAC1-201ENST00000373548 POLR3GLQ9BT43 218 aa27.11■■□□□ 1.93
HDAC1-201ENST00000373548 KIF1BO60333 1816 aa27.09■■□□□ 1.93
HDAC1-201ENST00000373548 GGT6Q6P531 493 aa27.08■■□□□ 1.93
HDAC1-201ENST00000373548 STAC3Q96MF2 364 aa27.07■■□□□ 1.92
HDAC1-201ENST00000373548 ABCC3O15438 1527 aa27.07■■□□□ 1.92
HDAC1-201ENST00000373548 TSPOAP1O95153 1857 aa27.06■■□□□ 1.92
HDAC1-201ENST00000373548 NPATQ14207 1427 aa27.06■■□□□ 1.92
HDAC1-201ENST00000373548 YEATS2Q9ULM3 1422 aa27.05■■□□□ 1.92
HDAC1-201ENST00000373548 MROH2AA6NES4 1674 aa27.03■■□□□ 1.92
HDAC1-201ENST00000373548 CFAP65Q6ZU64 1925 aaKnown RBP27.03■■□□□ 1.92
HDAC1-201ENST00000373548 ZMYM4Q5VZL5 1548 aa27.02■■□□□ 1.92
HDAC1-201ENST00000373548 CAMSAP1Q5T5Y3 1602 aa27.02■■□□□ 1.92
HDAC1-201ENST00000373548 IFT172Q9UG01 1749 aa27.01■■□□□ 1.91
HDAC1-201ENST00000373548 IQGAP1P46940 1657 aa27.01■■□□□ 1.91
HDAC1-201ENST00000373548 CCDC184Q52MB2 194 aa27■■□□□ 1.91
HDAC1-201ENST00000373548 WASHC2CQ9Y4E1 1318 aa27■■□□□ 1.91
HDAC1-201ENST00000373548 TESK2Q96S53 571 aa26.99■■□□□ 1.91
HDAC1-201ENST00000373548 DNAJC5Q9H3Z4 198 aa26.99■■□□□ 1.91
HDAC1-201ENST00000373548 KIAA1210Q9ULL0 1709 aa26.99■■□□□ 1.91
HDAC1-201ENST00000373548 COL17A1Q9UMD9 1497 aaPredicted RBP26.99■■□□□ 1.91
HDAC1-201ENST00000373548 MYOM2P54296 1465 aa26.98■■□□□ 1.91
HDAC1-201ENST00000373548 ADGRB3O60242 1522 aa26.97■■□□□ 1.91
HDAC1-201ENST00000373548 SIGLEC1Q9BZZ2 1709 aa26.95■■□□□ 1.91
HDAC1-201ENST00000373548 ZC3H13Q5T200 1668 aaKnown RBP26.95■■□□□ 1.9
HDAC1-201ENST00000373548 DISP3Q9P2K9 1392 aa26.93■■□□□ 1.9
HDAC1-201ENST00000373548 KIF13AQ9H1H9 1805 aa26.92■■□□□ 1.9
HDAC1-201ENST00000373548 NOS1P29475 1434 aa26.91■■□□□ 1.9
HDAC1-201ENST00000373548 SCAF11Q99590 1463 aaKnown RBP26.91■■□□□ 1.9
HDAC1-201ENST00000373548 MRS2Q9HD23 443 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms