RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 GCC2Q8IWJ2 1684 aa23.63■■□□□ 1.37
C9orf78-201ENST00000372447 SETD5Q9C0A6 1442 aa23.62■■□□□ 1.37
C9orf78-201ENST00000372447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.6■■□□□ 1.372e-7■■□□□ 14.5
C9orf78-201ENST00000372447 RNF17Q9BXT8 1623 aaKnown RBP23.58■■□□□ 1.37
C9orf78-201ENST00000372447 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
C9orf78-201ENST00000372447 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
C9orf78-201ENST00000372447 MROH1Q8NDA8 1641 aa23.56■■□□□ 1.36
C9orf78-201ENST00000372447 RAB3GAP2Q9H2M9 1393 aa23.56■■□□□ 1.36
C9orf78-201ENST00000372447 DEPDC5O75140 1603 aa23.55■■□□□ 1.36
C9orf78-201ENST00000372447 ADAMTSL3P82987 1691 aa23.54■■□□□ 1.36
C9orf78-201ENST00000372447 WASHC2CQ9Y4E1 1318 aa23.54■■□□□ 1.36
C9orf78-201ENST00000372447 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
C9orf78-201ENST00000372447 ESF1Q9H501 851 aaKnown RBP23.53■■□□□ 1.36
C9orf78-201ENST00000372447 PRDM15P57071 1507 aaPredicted RBP23.53■■□□□ 1.36
C9orf78-201ENST00000372447 CLSPNQ9HAW4 1339 aa23.52■■□□□ 1.36
C9orf78-201ENST00000372447 NUP155O75694 1391 aa23.52■■□□□ 1.36
C9orf78-201ENST00000372447 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
C9orf78-201ENST00000372447 KANK1Q14678 1352 aa23.51■■□□□ 1.35
C9orf78-201ENST00000372447 UNC13BO14795 1591 aa23.5■■□□□ 1.35
C9orf78-201ENST00000372447 MADDQ8WXG6 1647 aa23.5■■□□□ 1.35
C9orf78-201ENST00000372447 VWDEQ8N2E2 1590 aa23.49■■□□□ 1.35
C9orf78-201ENST00000372447 KDM5DQ9BY66 1539 aa23.48■■□□□ 1.35
C9orf78-201ENST00000372447 FER1L4A9Z1Z3 1794 aa23.47■■□□□ 1.35
C9orf78-201ENST00000372447 CNTLNQ9NXG0 1405 aa23.47■■□□□ 1.35
C9orf78-201ENST00000372447 ABCC3O15438 1527 aa23.47■■□□□ 1.35
C9orf78-201ENST00000372447 ZMYM3Q14202 1370 aa23.45■■□□□ 1.34
C9orf78-201ENST00000372447 CLTCQ00610 1675 aaKnown RBP23.45■■□□□ 1.34
C9orf78-201ENST00000372447 FAM135AQ9P2D6 1515 aa23.45■■□□□ 1.34
C9orf78-201ENST00000372447 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
C9orf78-201ENST00000372447 RIMS1Q86UR5 1692 aaKnown RBP23.43■■□□□ 1.34
C9orf78-201ENST00000372447 ACIN1Q9UKV3 1341 aaKnown RBP23.42■■□□□ 1.34
C9orf78-201ENST00000372447 LMTK2Q8IWU2 1503 aa23.42■■□□□ 1.34
C9orf78-201ENST00000372447 CEP152O94986 1710 aa23.42■■□□□ 1.34
C9orf78-201ENST00000372447 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
C9orf78-201ENST00000372447 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
C9orf78-201ENST00000372447 PTPRMP28827 1452 aa23.41■■□□□ 1.34
C9orf78-201ENST00000372447 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
C9orf78-201ENST00000372447 PZPP20742 1482 aa23.4■■□□□ 1.34
C9orf78-201ENST00000372447 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.33
C9orf78-201ENST00000372447 MROH2AA6NES4 1674 aa23.37■■□□□ 1.33
C9orf78-201ENST00000372447 MPHOSPH9Q99550 1183 aa23.37■■□□□ 1.33
C9orf78-201ENST00000372447 CAMSAP1Q5T5Y3 1602 aa23.37■■□□□ 1.33
C9orf78-201ENST00000372447 FBXO31Q5XUX0 539 aaPredicted RBP23.37■■□□□ 1.33
C9orf78-201ENST00000372447 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
C9orf78-201ENST00000372447 NPATQ14207 1427 aa23.36■■□□□ 1.33
C9orf78-201ENST00000372447 TET3O43151 1660 aa23.35■■□□□ 1.33
C9orf78-201ENST00000372447 EFCAB6Q5THR3 1501 aa23.34■■□□□ 1.33
C9orf78-201ENST00000372447 PKD2Q13563 968 aa23.34■■□□□ 1.33
C9orf78-201ENST00000372447 C3P01024 1663 aa23.34■■□□□ 1.33
C9orf78-201ENST00000372447 FOXD1Q16676 465 aa23.29■■□□□ 1.32
C9orf78-201ENST00000372447 E9PCH4 1651 aa23.29■■□□□ 1.32
C9orf78-201ENST00000372447 RPRD2Q5VT52 1461 aaKnown RBP23.28■■□□□ 1.32
C9orf78-201ENST00000372447 CFAP65Q6ZU64 1925 aaKnown RBP23.27■■□□□ 1.32
C9orf78-201ENST00000372447 ERVK-7P63135 1459 aa23.26■■□□□ 1.31
C9orf78-201ENST00000372447 ZNF316A6NFI3 1004 aaPredicted RBP23.25■■□□□ 1.31
C9orf78-201ENST00000372447 NOS1P29475 1434 aa23.24■■□□□ 1.31
C9orf78-201ENST00000372447 SPATA31D1Q6ZQQ2 1576 aa23.23■■□□□ 1.31
C9orf78-201ENST00000372447 TNRQ92752 1358 aa23.23■■□□□ 1.31
C9orf78-201ENST00000372447 PREX1Q8TCU6 1659 aa23.22■■□□□ 1.31
C9orf78-201ENST00000372447 PTPRTO14522 1441 aa23.21■■□□□ 1.31
C9orf78-201ENST00000372447 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
C9orf78-201ENST00000372447 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
C9orf78-201ENST00000372447 SYNMO15061 1565 aa23.17■■□□□ 1.3
C9orf78-201ENST00000372447 IDI1Q13907 227 aa23.17■■□□□ 1.3
C9orf78-201ENST00000372447 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
C9orf78-201ENST00000372447 SLC52A1Q9NWF4 448 aa23.15■■□□□ 1.3
C9orf78-201ENST00000372447 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.3
C9orf78-201ENST00000372447 ANKRD30BQ9BXX2 1392 aa23.14■■□□□ 1.29
C9orf78-201ENST00000372447 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.29
C9orf78-201ENST00000372447 UGGT1Q9NYU2 1555 aa23.13■■□□□ 1.29
C9orf78-201ENST00000372447 TRPM2O94759 1503 aa23.12■■□□□ 1.29
C9orf78-201ENST00000372447 NLRP1Q9C000 1473 aa23.12■■□□□ 1.29
C9orf78-201ENST00000372447 UHRF1BP1Q6BDS2 1440 aa23.11■■□□□ 1.29
C9orf78-201ENST00000372447 MYO3AQ8NEV4 1616 aa23.1■■□□□ 1.29
C9orf78-201ENST00000372447 PIK3C2BO00750 1634 aa23.08■■□□□ 1.29
C9orf78-201ENST00000372447 A2ML1A8K2U0 1454 aa23.07■■□□□ 1.28
C9orf78-201ENST00000372447 CCDC144AA2RUR9 1427 aa23.07■■□□□ 1.28
C9orf78-201ENST00000372447 CLTCL1P53675 1640 aa23.06■■□□□ 1.28
C9orf78-201ENST00000372447 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
C9orf78-201ENST00000372447 CHGAP10645 457 aaKnown RBP23.05■■□□□ 1.28
C9orf78-201ENST00000372447 STAG3Q9UJ98 1225 aa23.05■■□□□ 1.28
C9orf78-201ENST00000372447 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
C9orf78-201ENST00000372447 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
C9orf78-201ENST00000372447 HSPA2P54652 639 aa23.01■■□□□ 1.27
C9orf78-201ENST00000372447 THEMISQ8N1K5 641 aaPredicted RBP23.01■■□□□ 1.27
C9orf78-201ENST00000372447 ZNF142P52746 1687 aaPredicted RBP23.01■■□□□ 1.27
C9orf78-201ENST00000372447 TIMELESSQ9UNS1 1208 aa22.99■■□□□ 1.27
C9orf78-201ENST00000372447 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
C9orf78-201ENST00000372447 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
C9orf78-201ENST00000372447 ADGRB3O60242 1522 aa22.98■■□□□ 1.27
C9orf78-201ENST00000372447 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
C9orf78-201ENST00000372447 RGL3Q3MIN7 710 aa22.96■■□□□ 1.27
C9orf78-201ENST00000372447 KDM5AP29375 1690 aaKnown RBP22.95■■□□□ 1.27
C9orf78-201ENST00000372447 SPATA31E1Q6ZUB1 1445 aa22.95■■□□□ 1.26
C9orf78-201ENST00000372447 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
C9orf78-201ENST00000372447 TMEM2Q9UHN6 1383 aa22.94■■□□□ 1.26
C9orf78-201ENST00000372447 KIF1BO60333 1816 aa22.94■■□□□ 1.26
C9orf78-201ENST00000372447 MYO5BQ9ULV0 1848 aa22.93■■□□□ 1.26
C9orf78-201ENST00000372447 LTKP29376 864 aa22.9■■□□□ 1.26
C9orf78-201ENST00000372447 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms