RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 MPHOSPH9Q99550 1183 aa26.98■■□□□ 1.91
VEGFA-206ENST00000372077 EIF2AK4Q9P2K8 1649 aaKnown RBP26.98■■□□□ 1.91
VEGFA-206ENST00000372077 YEATS2Q9ULM3 1422 aa26.96■■□□□ 1.91
VEGFA-206ENST00000372077 NUP155O75694 1391 aa26.96■■□□□ 1.91
VEGFA-206ENST00000372077 DEPDC5O75140 1603 aa26.92■■□□□ 1.9
VEGFA-206ENST00000372077 SLC4A1APQ9BWU0 796 aaKnown RBP26.91■■□□□ 1.9
VEGFA-206ENST00000372077 BCORL1Q5H9F3 1711 aa26.9■■□□□ 1.9
VEGFA-206ENST00000372077 IQGAP3Q86VI3 1631 aa26.88■■□□□ 1.89
VEGFA-206ENST00000372077 KIF3BO15066 747 aa26.88■■□□□ 1.89
VEGFA-206ENST00000372077 ATP10AO60312 1499 aa26.88■■□□□ 1.89
VEGFA-206ENST00000372077 FAM135AQ9P2D6 1515 aa26.87■■□□□ 1.89
VEGFA-206ENST00000372077 DIEXFQ68CQ4 756 aaKnown RBP26.86■■□□□ 1.89
VEGFA-206ENST00000372077 REREQ9P2R6 1566 aa26.86■■□□□ 1.89
VEGFA-206ENST00000372077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.85■■□□□ 1.891e-12■■□□□ 14.3
VEGFA-206ENST00000372077 RNF17Q9BXT8 1623 aaKnown RBP26.85■■□□□ 1.89
VEGFA-206ENST00000372077 MROH1Q8NDA8 1641 aa26.85■■□□□ 1.89
VEGFA-206ENST00000372077 PRDM15P57071 1507 aaPredicted RBP26.83■■□□□ 1.89
VEGFA-206ENST00000372077 ARHGEF40Q8TER5 1519 aa26.83■■□□□ 1.89
VEGFA-206ENST00000372077 VWDEQ8N2E2 1590 aa26.83■■□□□ 1.89
VEGFA-206ENST00000372077 PKD2Q13563 968 aa26.81■■□□□ 1.88
VEGFA-206ENST00000372077 NEUROD1Q13562 356 aa26.8■■□□□ 1.88
VEGFA-206ENST00000372077 YTHDC1Q96MU7 727 aaKnown RBP26.8■■□□□ 1.88
VEGFA-206ENST00000372077 FOXD1Q16676 465 aa26.79■■□□□ 1.88
VEGFA-206ENST00000372077 ANKRD30BQ9BXX2 1392 aa26.79■■□□□ 1.88
VEGFA-206ENST00000372077 KANK1Q14678 1352 aa26.78■■□□□ 1.88
VEGFA-206ENST00000372077 AGLP35573 1532 aa26.78■■□□□ 1.88
VEGFA-206ENST00000372077 SIN3AQ96ST3 1273 aa26.77■■□□□ 1.88
VEGFA-206ENST00000372077 LMTK2Q8IWU2 1503 aa26.72■■□□□ 1.87
VEGFA-206ENST00000372077 MYT1Q01538 1121 aa26.72■■□□□ 1.87
VEGFA-206ENST00000372077 TET3O43151 1660 aa26.71■■□□□ 1.87
VEGFA-206ENST00000372077 GGT6Q6P531 493 aa26.71■■□□□ 1.87
VEGFA-206ENST00000372077 SIGLEC1Q9BZZ2 1709 aa26.71■■□□□ 1.87
VEGFA-206ENST00000372077 TIMELESSQ9UNS1 1208 aa26.66■■□□□ 1.86
VEGFA-206ENST00000372077 E9PCH4 1651 aa26.66■■□□□ 1.86
VEGFA-206ENST00000372077 CEP152O94986 1710 aa26.65■■□□□ 1.86
VEGFA-206ENST00000372077 ABCC3O15438 1527 aa26.65■■□□□ 1.86
VEGFA-206ENST00000372077 EFCAB6Q5THR3 1501 aa26.63■■□□□ 1.85
VEGFA-206ENST00000372077 RPRD2Q5VT52 1461 aaKnown RBP26.63■■□□□ 1.85
VEGFA-206ENST00000372077 PLA2R1Q13018 1463 aa26.62■■□□□ 1.85
VEGFA-206ENST00000372077 ZC3H13Q5T200 1668 aaKnown RBP26.62■■□□□ 1.85
VEGFA-206ENST00000372077 PPP6R1Q9UPN7 881 aa26.61■■□□□ 1.85
VEGFA-206ENST00000372077 WASHC2CQ9Y4E1 1318 aa26.61■■□□□ 1.85
VEGFA-206ENST00000372077 PTPRTO14522 1441 aa26.58■■□□□ 1.85
VEGFA-206ENST00000372077 CAMSAP1Q5T5Y3 1602 aa26.56■■□□□ 1.84
VEGFA-206ENST00000372077 GTF3C3Q9Y5Q9 886 aa26.56■■□□□ 1.84
VEGFA-206ENST00000372077 TONSLQ96HA7 1378 aa26.55■■□□□ 1.84
VEGFA-206ENST00000372077 ARHGAP31Q2M1Z3 1444 aa26.54■■□□□ 1.84
VEGFA-206ENST00000372077 SPHKAPQ2M3C7 1700 aa26.54■■□□□ 1.84
VEGFA-206ENST00000372077 NPATQ14207 1427 aa26.54■■□□□ 1.84
VEGFA-206ENST00000372077 TRPM2O94759 1503 aa26.53■■□□□ 1.84
VEGFA-206ENST00000372077 CCDC144AA2RUR9 1427 aa26.51■■□□□ 1.84
VEGFA-206ENST00000372077 ARID4BQ4LE39 1312 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-206ENST00000372077 MLECQ14165 292 aa26.49■■□□□ 1.83
VEGFA-206ENST00000372077 PPP1R15AO75807 674 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-206ENST00000372077 ZNF316A6NFI3 1004 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-206ENST00000372077 CLTCQ00610 1675 aaKnown RBP26.46■■□□□ 1.83
VEGFA-206ENST00000372077 L3MBTL2Q969R5 705 aa26.45■■□□□ 1.83
VEGFA-206ENST00000372077 NOS1P29475 1434 aa26.44■■□□□ 1.82
VEGFA-206ENST00000372077 CNTLNQ9NXG0 1405 aa26.43■■□□□ 1.82
VEGFA-206ENST00000372077 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
VEGFA-206ENST00000372077 MIER1Q8N108 512 aa26.4■■□□□ 1.82
VEGFA-206ENST00000372077 CFAP65Q6ZU64 1925 aaKnown RBP26.38■■□□□ 1.81
VEGFA-206ENST00000372077 PREX1Q8TCU6 1659 aa26.37■■□□□ 1.81
VEGFA-206ENST00000372077 ESF1Q9H501 851 aaKnown RBP26.37■■□□□ 1.81
VEGFA-206ENST00000372077 SPATA31E1Q6ZUB1 1445 aa26.37■■□□□ 1.81
VEGFA-206ENST00000372077 SYNMO15061 1565 aa26.36■■□□□ 1.81
VEGFA-206ENST00000372077 UGGT1Q9NYU2 1555 aa26.36■■□□□ 1.81
VEGFA-206ENST00000372077 NEURL4Q96JN8 1562 aa26.35■■□□□ 1.81
VEGFA-206ENST00000372077 ZMYM3Q14202 1370 aa26.35■■□□□ 1.81
VEGFA-206ENST00000372077 MROH2AA6NES4 1674 aa26.34■■□□□ 1.81
VEGFA-206ENST00000372077 ERVK-7P63135 1459 aa26.34■■□□□ 1.81
VEGFA-206ENST00000372077 PIK3C2BO00750 1634 aa26.33■■□□□ 1.81
VEGFA-206ENST00000372077 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.8
VEGFA-206ENST00000372077 FBXO31Q5XUX0 539 aaPredicted RBP26.31■■□□□ 1.8
VEGFA-206ENST00000372077 SPATA31D1Q6ZQQ2 1576 aa26.31■■□□□ 1.8
VEGFA-206ENST00000372077 KIF1BO60333 1816 aa26.29■■□□□ 1.8
VEGFA-206ENST00000372077 FER1L4A9Z1Z3 1794 aa26.29■■□□□ 1.8
VEGFA-206ENST00000372077 RGL3Q3MIN7 710 aa26.28■■□□□ 1.8
VEGFA-206ENST00000372077 SLC52A1Q9NWF4 448 aa26.28■■□□□ 1.8
VEGFA-206ENST00000372077 UHRF1BP1Q6BDS2 1440 aa26.26■■□□□ 1.79
VEGFA-206ENST00000372077 ADGRB3O60242 1522 aa26.26■■□□□ 1.79
VEGFA-206ENST00000372077 DCAF11Q8TEB1 546 aa26.25■■□□□ 1.79
VEGFA-206ENST00000372077 NBPF8Q3BBV2 869 aa26.25■■□□□ 1.79
VEGFA-206ENST00000372077 IDI1Q13907 227 aa26.24■■□□□ 1.79
VEGFA-206ENST00000372077 ADAMTSL3P82987 1691 aa26.23■■□□□ 1.79
VEGFA-206ENST00000372077 STAC3Q96MF2 364 aa26.2■■□□□ 1.78
VEGFA-206ENST00000372077 C3P01024 1663 aa26.2■■□□□ 1.78
VEGFA-206ENST00000372077 KDM2AQ9Y2K7 1162 aa26.2■■□□□ 1.78
VEGFA-206ENST00000372077 MADDQ8WXG6 1647 aa26.19■■□□□ 1.78
VEGFA-206ENST00000372077 PRAG1Q86YV5 1406 aa26.16■■□□□ 1.78
VEGFA-206ENST00000372077 TMEM131LA2VDJ0 1609 aa26.16■■□□□ 1.78
VEGFA-206ENST00000372077 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
VEGFA-206ENST00000372077 TNRQ92752 1358 aa26.15■■□□□ 1.78
VEGFA-206ENST00000372077 IFT172Q9UG01 1749 aa26.15■■□□□ 1.78
VEGFA-206ENST00000372077 CEBPAP49715 358 aaPredicted RBP26.14■■□□□ 1.78
VEGFA-206ENST00000372077 RIMS1Q86UR5 1692 aaKnown RBP26.14■■□□□ 1.77
VEGFA-206ENST00000372077 RPGRIP1LQ68CZ1 1315 aa26.14■■□□□ 1.77
VEGFA-206ENST00000372077 MYOM2P54296 1465 aa26.12■■□□□ 1.77
VEGFA-206ENST00000372077 ZNF326Q5BKZ1 582 aaKnown RBP26.11■■□□□ 1.77
VEGFA-206ENST00000372077 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms