RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RICTORQ6R327 1708 aa37.98■■■■□ 3.67
ATPAF1-202ENST00000371937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.98■■■■□ 3.678e-11■■■□□ 18.6
ATPAF1-202ENST00000371937 IQGAP3Q86VI3 1631 aa37.97■■■■□ 3.67
ATPAF1-202ENST00000371937 EIF2AK4Q9P2K8 1649 aaKnown RBP37.97■■■■□ 3.67
ATPAF1-202ENST00000371937 A2MP01023 1474 aa37.93■■■■□ 3.66
ATPAF1-202ENST00000371937 RPRD2Q5VT52 1461 aaKnown RBP37.91■■■■□ 3.66
ATPAF1-202ENST00000371937 DEPDC5O75140 1603 aa37.9■■■■□ 3.66
ATPAF1-202ENST00000371937 PPP1R15AO75807 674 aaPredicted RBP37.88■■■■□ 3.65
ATPAF1-202ENST00000371937 KIF3BO15066 747 aa37.87■■■■□ 3.65
ATPAF1-202ENST00000371937 ABCA6Q8N139 1617 aa37.85■■■■□ 3.65
ATPAF1-202ENST00000371937 FRMPD1Q5SYB0 1578 aa37.85■■■■□ 3.65
ATPAF1-202ENST00000371937 KANK1Q14678 1352 aa37.84■■■■□ 3.65
ATPAF1-202ENST00000371937 DNAJC5Q9H3Z4 198 aa37.84■■■■□ 3.65
ATPAF1-202ENST00000371937 ZMYM4Q5VZL5 1548 aa37.83■■■■□ 3.65
ATPAF1-202ENST00000371937 ZNF316A6NFI3 1004 aaPredicted RBP37.79■■■■□ 3.64
ATPAF1-202ENST00000371937 DIP2CQ9Y2E4 1556 aa37.78■■■■□ 3.64
ATPAF1-202ENST00000371937 PRDM15P57071 1507 aaPredicted RBP37.78■■■■□ 3.64
ATPAF1-202ENST00000371937 VWDEQ8N2E2 1590 aa37.76■■■■□ 3.63
ATPAF1-202ENST00000371937 BCORL1Q5H9F3 1711 aa37.74■■■■□ 3.63
ATPAF1-202ENST00000371937 RNF17Q9BXT8 1623 aaKnown RBP37.73■■■■□ 3.63
ATPAF1-202ENST00000371937 MROH1Q8NDA8 1641 aa37.72■■■■□ 3.63
ATPAF1-202ENST00000371937 YEATS2Q9ULM3 1422 aa37.71■■■■□ 3.63
ATPAF1-202ENST00000371937 L3MBTL2Q969R5 705 aa37.7■■■■□ 3.63
ATPAF1-202ENST00000371937 TET3O43151 1660 aa37.68■■■■□ 3.62
ATPAF1-202ENST00000371937 ATP10AO60312 1499 aa37.67■■■■□ 3.62
ATPAF1-202ENST00000371937 CCDC144AA2RUR9 1427 aa37.64■■■■□ 3.62
ATPAF1-202ENST00000371937 PLA2R1Q13018 1463 aa37.62■■■■□ 3.61
ATPAF1-202ENST00000371937 E9PCH4 1651 aa37.61■■■■□ 3.61
ATPAF1-202ENST00000371937 COL17A1Q9UMD9 1497 aaPredicted RBP37.61■■■■□ 3.61
ATPAF1-202ENST00000371937 LMTK2Q8IWU2 1503 aa37.6■■■■□ 3.61
ATPAF1-202ENST00000371937 GGT6Q6P531 493 aa37.58■■■■□ 3.61
ATPAF1-202ENST00000371937 REREQ9P2R6 1566 aa37.55■■■■□ 3.6
ATPAF1-202ENST00000371937 TRHP20396 242 aaPredicted RBP37.54■■■■□ 3.6
ATPAF1-202ENST00000371937 EFCAB6Q5THR3 1501 aa37.52■■■■□ 3.6
ATPAF1-202ENST00000371937 PTPRTO14522 1441 aa37.52■■■■□ 3.6
ATPAF1-202ENST00000371937 TRPM2O94759 1503 aa37.49■■■■□ 3.59
ATPAF1-202ENST00000371937 CEP152O94986 1710 aa37.48■■■■□ 3.59
ATPAF1-202ENST00000371937 WASHC2CQ9Y4E1 1318 aa37.48■■■■□ 3.59
ATPAF1-202ENST00000371937 SPHKAPQ2M3C7 1700 aa37.48■■■■□ 3.59
ATPAF1-202ENST00000371937 ARHGEF40Q8TER5 1519 aa37.45■■■■□ 3.59
ATPAF1-202ENST00000371937 ABCC3O15438 1527 aa37.45■■■■□ 3.59
ATPAF1-202ENST00000371937 AGLP35573 1532 aa37.45■■■■□ 3.59
ATPAF1-202ENST00000371937 ZC3H13Q5T200 1668 aaKnown RBP37.4■■■■□ 3.58
ATPAF1-202ENST00000371937 NBPF8Q3BBV2 869 aa37.38■■■■□ 3.57
ATPAF1-202ENST00000371937 DIEXFQ68CQ4 756 aaKnown RBP37.35■■■■□ 3.57
ATPAF1-202ENST00000371937 NPATQ14207 1427 aa37.34■■■■□ 3.57
ATPAF1-202ENST00000371937 UHRF1BP1Q6BDS2 1440 aa37.34■■■■□ 3.57
ATPAF1-202ENST00000371937 PPP6R1Q9UPN7 881 aa37.34■■■■□ 3.57
ATPAF1-202ENST00000371937 CAMSAP1Q5T5Y3 1602 aa37.34■■■■□ 3.57
ATPAF1-202ENST00000371937 DCAF11Q8TEB1 546 aa37.33■■■■□ 3.57
ATPAF1-202ENST00000371937 CLTCL1P53675 1640 aa37.31■■■■□ 3.56
ATPAF1-202ENST00000371937 RGL3Q3MIN7 710 aa37.31■■■■□ 3.56
ATPAF1-202ENST00000371937 ARHGAP31Q2M1Z3 1444 aa37.31■■■■□ 3.56
ATPAF1-202ENST00000371937 SPATA31E1Q6ZUB1 1445 aa37.29■■■■□ 3.56
ATPAF1-202ENST00000371937 KDM2AQ9Y2K7 1162 aa37.26■■■■□ 3.55
ATPAF1-202ENST00000371937 CNTLNQ9NXG0 1405 aa37.26■■■■□ 3.55
ATPAF1-202ENST00000371937 ZNF326Q5BKZ1 582 aaKnown RBP37.25■■■■□ 3.55
ATPAF1-202ENST00000371937 NEURL4Q96JN8 1562 aa37.24■■■■□ 3.55
ATPAF1-202ENST00000371937 SIGLEC1Q9BZZ2 1709 aa37.22■■■■□ 3.55
ATPAF1-202ENST00000371937 EIF4G2P78344 907 aaKnown RBP eCLIP37.2■■■■□ 3.55
ATPAF1-202ENST00000371937 STAC3Q96MF2 364 aa37.19■■■■□ 3.54
ATPAF1-202ENST00000371937 NOS1P29475 1434 aa37.19■■■■□ 3.54
ATPAF1-202ENST00000371937 RALGAPBQ86X10 1494 aa37.17■■■■□ 3.54
ATPAF1-202ENST00000371937 UGGT1Q9NYU2 1555 aa37.16■■■■□ 3.54
ATPAF1-202ENST00000371937 PRAG1Q86YV5 1406 aa37.16■■■■□ 3.54
ATPAF1-202ENST00000371937 KIF1BO60333 1816 aa37.15■■■■□ 3.54
ATPAF1-202ENST00000371937 CFAP65Q6ZU64 1925 aaKnown RBP37.14■■■■□ 3.54
ATPAF1-202ENST00000371937 HSPA5P11021 654 aaKnown RBP37.13■■■■□ 3.53
ATPAF1-202ENST00000371937 HIRIP3Q9BW71 556 aaPredicted RBP37.13■■■■□ 3.53
ATPAF1-202ENST00000371937 MLECQ14165 292 aa37.1■■■■□ 3.53
ATPAF1-202ENST00000371937 ARID4BQ4LE39 1312 aaPredicted RBP37.08■■■■□ 3.53
ATPAF1-202ENST00000371937 CLTCQ00610 1675 aaKnown RBP37.06■■■■□ 3.52
ATPAF1-202ENST00000371937 SYNMO15061 1565 aa37.05■■■■□ 3.52
ATPAF1-202ENST00000371937 ESF1Q9H501 851 aaKnown RBP37.05■■■■□ 3.52
ATPAF1-202ENST00000371937 PREX1Q8TCU6 1659 aa37.04■■■■□ 3.52
ATPAF1-202ENST00000371937 SLC52A1Q9NWF4 448 aa37.03■■■■□ 3.52
ATPAF1-202ENST00000371937 PIK3C2BO00750 1634 aa37.03■■■■□ 3.52
ATPAF1-202ENST00000371937 ADGRB3O60242 1522 aa37.03■■■■□ 3.52
ATPAF1-202ENST00000371937 TRPM1Q7Z4N2 1603 aa37.03■■■■□ 3.52
ATPAF1-202ENST00000371937 CARD11Q9BXL7 1154 aa37.01■■■■□ 3.52
ATPAF1-202ENST00000371937 ROCK2O75116 1388 aaKnown RBP37■■■■□ 3.51
ATPAF1-202ENST00000371937 USP47Q96K76 1375 aa36.98■■■■□ 3.51
ATPAF1-202ENST00000371937 CHGAP10645 457 aaKnown RBP36.97■■■■□ 3.51
ATPAF1-202ENST00000371937 ERVK-7P63135 1459 aa36.97■■■■□ 3.51
ATPAF1-202ENST00000371937 MROH2AA6NES4 1674 aa36.97■■■■□ 3.51
ATPAF1-202ENST00000371937 MADDQ8WXG6 1647 aa36.95■■■■□ 3.51
ATPAF1-202ENST00000371937 MYOM2P54296 1465 aa36.95■■■■□ 3.51
ATPAF1-202ENST00000371937 GPRASP1Q5JY77 1395 aa36.94■■■■□ 3.5
ATPAF1-202ENST00000371937 RPGRIP1LQ68CZ1 1315 aa36.93■■■■□ 3.5
ATPAF1-202ENST00000371937 IDI1Q13907 227 aa36.92■■■■□ 3.5
ATPAF1-202ENST00000371937 FBXO31Q5XUX0 539 aaPredicted RBP36.92■■■■□ 3.5
ATPAF1-202ENST00000371937 IFT172Q9UG01 1749 aa36.91■■■■□ 3.5
ATPAF1-202ENST00000371937 ZMYM3Q14202 1370 aa36.9■■■■□ 3.5
ATPAF1-202ENST00000371937 LAMC1P11047 1609 aa36.9■■■■□ 3.5
ATPAF1-202ENST00000371937 SPATA31D1Q6ZQQ2 1576 aa36.89■■■■□ 3.5
ATPAF1-202ENST00000371937 NBPF1Q3BBV0 1214 aa36.87■■■■□ 3.49
ATPAF1-202ENST00000371937 DDX10Q13206 875 aaKnown RBP36.85■■■■□ 3.49
ATPAF1-202ENST00000371937 PPLO60437 1756 aa36.82■■■■□ 3.48
ATPAF1-202ENST00000371937 NRXN1Q9ULB1 1477 aa36.81■■■■□ 3.48
ATPAF1-202ENST00000371937 KIAA1210Q9ULL0 1709 aa36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms