RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 RRP7AQ9Y3A4 280 aaKnown RBP21.34■■□□□ 1.01
PTP4A1-201ENST00000370651 COG6Q9Y2V7 657 aa21.34■■□□□ 1.01
PTP4A1-201ENST00000370651 TRIM6-TRIM34B2RNG4 842 aa21.34■■□□□ 1.01
PTP4A1-201ENST00000370651 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTP4A1-201ENST00000370651 EFCAB2Q5VUJ9 269 aa21.33■■□□□ 1.01
PTP4A1-201ENST00000370651 BCL2L13Q9BXK5 485 aa21.33■■□□□ 1.01
PTP4A1-201ENST00000370651 PHF14O94880 888 aa21.33■■□□□ 1.01
PTP4A1-201ENST00000370651 ERCC6Q03468 1493 aa21.33■■□□□ 1
PTP4A1-201ENST00000370651 CSPP1Q1MSJ5 1256 aa21.32■■□□□ 1
PTP4A1-201ENST00000370651 STK31Q9BXU1 1019 aa21.32■■□□□ 1
PTP4A1-201ENST00000370651 CCDC7Q96M83 1385 aa21.32■■□□□ 1
PTP4A1-201ENST00000370651 HDGFP51858 240 aaKnown RBP21.31■■□□□ 1
PTP4A1-201ENST00000370651 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
PTP4A1-201ENST00000370651 NOL8Q76FK4 1167 aaKnown RBP21.31■■□□□ 1
PTP4A1-201ENST00000370651 TERF2IPQ9NYB0 399 aa21.31■■□□□ 1
PTP4A1-201ENST00000370651 GNL2Q13823 731 aaKnown RBP21.3■■□□□ 1
PTP4A1-201ENST00000370651 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
PTP4A1-201ENST00000370651 ZKSCAN2Q63HK3 967 aa21.3■■□□□ 1
PTP4A1-201ENST00000370651 CCDC144AA2RUR9 1427 aa21.29■■□□□ 1
PTP4A1-201ENST00000370651 CNTLNQ9NXG0 1405 aa21.28■■□□□ 1
PTP4A1-201ENST00000370651 APAF1O14727 1248 aa21.28■■□□□ 1
PTP4A1-201ENST00000370651 NFKBIBQ15653 356 aa21.28■■□□□ 1
PTP4A1-201ENST00000370651 KIF7Q2M1P5 1343 aa21.27■■□□□ 1
PTP4A1-201ENST00000370651 FOXD4L5Q5VV16 416 aaPredicted RBP21.27■■□□□ 1
PTP4A1-201ENST00000370651 FOXD4L4Q8WXT5 416 aaPredicted RBP21.27■■□□□ 1
PTP4A1-201ENST00000370651 CHMP5Q9NZZ3 219 aa21.26■□□□□ 0.99
PTP4A1-201ENST00000370651 SPAG9O60271 1321 aaKnown RBP21.26■□□□□ 0.99
PTP4A1-201ENST00000370651 TULP1O00294 542 aaPredicted RBP21.26■□□□□ 0.99
PTP4A1-201ENST00000370651 LMOD3Q0VAK6 560 aa21.26■□□□□ 0.99
PTP4A1-201ENST00000370651 ANKRD45Q5TZF3 282 aa21.26■□□□□ 0.99
PTP4A1-201ENST00000370651 SLC4A10Q6U841 1118 aa21.25■□□□□ 0.99
PTP4A1-201ENST00000370651 KIF3BO15066 747 aa21.24■□□□□ 0.99
PTP4A1-201ENST00000370651 TPM4P67936 248 aa21.23■□□□□ 0.99
PTP4A1-201ENST00000370651 CHMP4AQ9BY43 222 aa21.23■□□□□ 0.99
PTP4A1-201ENST00000370651 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
PTP4A1-201ENST00000370651 GPATCH3Q96I76 525 aa21.22■□□□□ 0.99
PTP4A1-201ENST00000370651 UACAQ9BZF9 1416 aa21.21■□□□□ 0.99
PTP4A1-201ENST00000370651 WASHC2AQ641Q2 1341 aa21.21■□□□□ 0.99
PTP4A1-201ENST00000370651 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
PTP4A1-201ENST00000370651 TNNT3P45378 269 aaPredicted RBP21.2■□□□□ 0.98
PTP4A1-201ENST00000370651 KIF16BQ96L93 1317 aa21.19■□□□□ 0.98
PTP4A1-201ENST00000370651 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
PTP4A1-201ENST00000370651 MLECQ14165 292 aa21.18■□□□□ 0.98
PTP4A1-201ENST00000370651 HDAC5Q9UQL6 1122 aa21.18■□□□□ 0.98
PTP4A1-201ENST00000370651 DDX19BQ9UMR2 479 aa21.18■□□□□ 0.98
PTP4A1-201ENST00000370651 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
PTP4A1-201ENST00000370651 KIF21BO75037 1637 aa21.17■□□□□ 0.98
PTP4A1-201ENST00000370651 HSP90B1P14625 803 aaKnown RBP21.17■□□□□ 0.98
PTP4A1-201ENST00000370651 FGD6Q6ZV73 1430 aa21.16■□□□□ 0.98
PTP4A1-201ENST00000370651 ELL2O00472 640 aaPredicted RBP21.16■□□□□ 0.98
PTP4A1-201ENST00000370651 DZIP1LQ8IYY4 767 aaKnown RBP21.14■□□□□ 0.98
PTP4A1-201ENST00000370651 ATP6V1DQ9Y5K8 247 aa21.14■□□□□ 0.98
PTP4A1-201ENST00000370651 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
PTP4A1-201ENST00000370651 FAM43AQ8N2R8 423 aa21.13■□□□□ 0.97
PTP4A1-201ENST00000370651 PAK3O75914 559 aaPredicted RBP21.12■□□□□ 0.97
PTP4A1-201ENST00000370651 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
PTP4A1-201ENST00000370651 FOXD4L6Q3SYB3 417 aaPredicted RBP21.12■□□□□ 0.97
PTP4A1-201ENST00000370651 FOXD4L3Q6VB84 417 aaPredicted RBP21.12■□□□□ 0.97
PTP4A1-201ENST00000370651 RILPL2Q969X0 211 aa21.11■□□□□ 0.97
PTP4A1-201ENST00000370651 BRD4O60885 1362 aaPredicted RBP21.11■□□□□ 0.97
PTP4A1-201ENST00000370651 REC8O95072 547 aa21.1■□□□□ 0.97
PTP4A1-201ENST00000370651 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTP4A1-201ENST00000370651 C22orf23Q9BZE7 217 aa21.1■□□□□ 0.97
PTP4A1-201ENST00000370651 CCDC34Q96HJ3 373 aa21.1■□□□□ 0.97
PTP4A1-201ENST00000370651 NPHP1O15259 732 aa21.1■□□□□ 0.97
PTP4A1-201ENST00000370651 FAM13BQ9NYF5 915 aa21.1■□□□□ 0.97
PTP4A1-201ENST00000370651 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
PTP4A1-201ENST00000370651 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.09■□□□□ 0.97
PTP4A1-201ENST00000370651 KIF3AQ9Y496 699 aa21.09■□□□□ 0.97
PTP4A1-201ENST00000370651 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
PTP4A1-201ENST00000370651 MRE11P49959 708 aa21.08■□□□□ 0.97
PTP4A1-201ENST00000370651 AAMPQ13685 434 aa21.08■□□□□ 0.96
PTP4A1-201ENST00000370651 LRRC9Q6ZRR7 1453 aa21.08■□□□□ 0.96
PTP4A1-201ENST00000370651 BRPF3Q9ULD4 1205 aa21.07■□□□□ 0.96
PTP4A1-201ENST00000370651 GOLGA6L1Q8N7Z2 621 aa21.06■□□□□ 0.96
PTP4A1-201ENST00000370651 NUCB2P80303 420 aa21.05■□□□□ 0.96
PTP4A1-201ENST00000370651 GORABQ5T7V8 394 aa21.05■□□□□ 0.96
PTP4A1-201ENST00000370651 GOLGA6L19H0YKK7 550 aa21.05■□□□□ 0.96
PTP4A1-201ENST00000370651 SF3A1Q15459 793 aaKnown RBP21.05■□□□□ 0.96
PTP4A1-201ENST00000370651 RRBP1Q9P2E9 1410 aaKnown RBP21.05■□□□□ 0.96
PTP4A1-201ENST00000370651 IL27Q8NEV9 243 aa21.05■□□□□ 0.96
PTP4A1-201ENST00000370651 CDCA7LQ96GN5 454 aa21.04■□□□□ 0.96
PTP4A1-201ENST00000370651 IGF1RP08069 1367 aa21.04■□□□□ 0.96
PTP4A1-201ENST00000370651 PANK1Q8TE04 598 aa21.04■□□□□ 0.96
PTP4A1-201ENST00000370651 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
PTP4A1-201ENST00000370651 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
PTP4A1-201ENST00000370651 WASHC2CQ9Y4E1 1318 aa21.03■□□□□ 0.96
PTP4A1-201ENST00000370651 EVC2Q86UK5 1308 aa21.03■□□□□ 0.96
PTP4A1-201ENST00000370651 BECN2A8MW95 431 aa21.02■□□□□ 0.96
PTP4A1-201ENST00000370651 JPH4Q96JJ6 628 aa21.02■□□□□ 0.96
PTP4A1-201ENST00000370651 LNPKQ9C0E8 428 aa21.02■□□□□ 0.96
PTP4A1-201ENST00000370651 CHMP3Q9Y3E7 222 aa21.02■□□□□ 0.96
PTP4A1-201ENST00000370651 MIA2Q96PC5 1412 aa21.02■□□□□ 0.96
PTP4A1-201ENST00000370651 H3BQV1 296 aa21.01■□□□□ 0.95
PTP4A1-201ENST00000370651 IFFO2Q5TF58 517 aa21.01■□□□□ 0.95
PTP4A1-201ENST00000370651 BACH2Q9BYV9 841 aa21.01■□□□□ 0.95
PTP4A1-201ENST00000370651 API5Q9BZZ5 524 aaKnown RBP21.01■□□□□ 0.95
PTP4A1-201ENST00000370651 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
PTP4A1-201ENST00000370651 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
PTP4A1-201ENST00000370651 CUX1P39880 1505 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms