RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
BRCC3-203ENST00000369459 FAM50AQ14320 339 aaKnown RBP10.58□□□□□ -0.72
BRCC3-203ENST00000369459 KDM2AQ9Y2K7 1162 aa10.58□□□□□ -0.72
BRCC3-203ENST00000369459 ABCC5O15440 1437 aa10.58□□□□□ -0.72
BRCC3-203ENST00000369459 PLXNC1O60486 1568 aa10.58□□□□□ -0.72
BRCC3-203ENST00000369459 CCDC141Q6ZP82 1450 aa10.57□□□□□ -0.72
BRCC3-203ENST00000369459 MBD5Q9P267 1494 aa10.57□□□□□ -0.72
BRCC3-203ENST00000369459 ZMYND15Q9H091 742 aa10.56□□□□□ -0.72
BRCC3-203ENST00000369459 PTPRKQ15262 1439 aa10.56□□□□□ -0.72
BRCC3-203ENST00000369459 DIP2BQ9P265 1576 aa10.55□□□□□ -0.72
BRCC3-203ENST00000369459 NAIPQ13075 1403 aa10.54□□□□□ -0.72
BRCC3-203ENST00000369459 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-203ENST00000369459 NEO1Q92859 1461 aa10.54□□□□□ -0.72
BRCC3-203ENST00000369459 SYCP2Q9BX26 1530 aa10.54□□□□□ -0.72
BRCC3-203ENST00000369459 EFCAB2Q5VUJ9 269 aa10.54□□□□□ -0.72
BRCC3-203ENST00000369459 KIF13AQ9H1H9 1805 aa10.52□□□□□ -0.72
BRCC3-203ENST00000369459 FANCAO15360 1455 aa10.52□□□□□ -0.73
BRCC3-203ENST00000369459 RTEL1-TNFRSF6BF6WH68 1400 aa10.52□□□□□ -0.73
BRCC3-203ENST00000369459 RAB3GAP2Q9H2M9 1393 aa10.52□□□□□ -0.73
BRCC3-203ENST00000369459 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
BRCC3-203ENST00000369459 NCOA1Q15788 1441 aa10.51□□□□□ -0.73
BRCC3-203ENST00000369459 C9orf84Q5VXU9 1444 aa10.51□□□□□ -0.73
BRCC3-203ENST00000369459 ANKRD30AQ9BXX3 1397 aa10.51□□□□□ -0.73
BRCC3-203ENST00000369459 CD109Q6YHK3 1445 aa10.5□□□□□ -0.73
BRCC3-203ENST00000369459 BRPF3Q9ULD4 1205 aa10.5□□□□□ -0.73
BRCC3-203ENST00000369459 PPRC1Q5VV67 1664 aaKnown RBP10.49□□□□□ -0.73
BRCC3-203ENST00000369459 CYB5RLQ6IPT4 315 aa10.49□□□□□ -0.73
BRCC3-203ENST00000369459 KDM5CP41229 1560 aa10.49□□□□□ -0.73
BRCC3-203ENST00000369459 KDM5DQ9BY66 1539 aa10.49□□□□□ -0.73
BRCC3-203ENST00000369459 EIF2AK4Q9P2K8 1649 aaKnown RBP10.49□□□□□ -0.73
BRCC3-203ENST00000369459 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
BRCC3-203ENST00000369459 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
BRCC3-203ENST00000369459 CCDC9Q9Y3X0 531 aaKnown RBP10.49□□□□□ -0.73
BRCC3-203ENST00000369459 ZNF644Q9H582 1327 aaPredicted RBP10.48□□□□□ -0.73
BRCC3-203ENST00000369459 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
BRCC3-203ENST00000369459 TEX14Q8IWB6 1497 aa10.48□□□□□ -0.73
BRCC3-203ENST00000369459 BCORL1Q5H9F3 1711 aa10.48□□□□□ -0.73
BRCC3-203ENST00000369459 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
BRCC3-203ENST00000369459 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
BRCC3-203ENST00000369459 ZFYVE16Q7Z3T8 1539 aa10.47□□□□□ -0.73
BRCC3-203ENST00000369459 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
BRCC3-203ENST00000369459 ADGRL1O94910 1474 aa10.47□□□□□ -0.73
BRCC3-203ENST00000369459 UNC13BO14795 1591 aa10.47□□□□□ -0.73
BRCC3-203ENST00000369459 RICTORQ6R327 1708 aa10.47□□□□□ -0.73
BRCC3-203ENST00000369459 ZNF518AQ6AHZ1 1483 aa10.47□□□□□ -0.73
BRCC3-203ENST00000369459 TSPY4P0CV99 314 aa10.46□□□□□ -0.73
BRCC3-203ENST00000369459 TSPY10P0CW01 314 aa10.46□□□□□ -0.73
BRCC3-203ENST00000369459 ATP7AQ04656 1500 aa10.45□□□□□ -0.74
BRCC3-203ENST00000369459 ITGAEP38570 1179 aa10.45□□□□□ -0.74
BRCC3-203ENST00000369459 GLIPR1L2Q4G1C9 344 aa10.45□□□□□ -0.74
BRCC3-203ENST00000369459 ERBINQ96RT1 1412 aa10.45□□□□□ -0.74
BRCC3-203ENST00000369459 KDM6BO15054 1643 aa10.45□□□□□ -0.74
BRCC3-203ENST00000369459 HMGB1P09429 215 aaKnown RBP10.45□□□□□ -0.74
BRCC3-203ENST00000369459 ZNF777Q9ULD5 760 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-203ENST00000369459 HECW2Q9P2P5 1572 aa10.45□□□□□ -0.74
BRCC3-203ENST00000369459 KIDINS220Q9ULH0 1771 aa10.44□□□□□ -0.74
BRCC3-203ENST00000369459 DEPDC5O75140 1603 aa10.44□□□□□ -0.74
BRCC3-203ENST00000369459 ZMYM4Q5VZL5 1548 aa10.44□□□□□ -0.74
BRCC3-203ENST00000369459 CCER1Q8TC90 406 aaPredicted RBP10.44□□□□□ -0.74
BRCC3-203ENST00000369459 MLH3Q9UHC1 1453 aa10.44□□□□□ -0.74
BRCC3-203ENST00000369459 POGZQ7Z3K3 1410 aa10.43□□□□□ -0.74
BRCC3-203ENST00000369459 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
BRCC3-203ENST00000369459 PUS7Q96PZ0 661 aaKnown RBP10.43□□□□□ -0.74
BRCC3-203ENST00000369459 ANKRD50Q9ULJ7 1429 aa10.43□□□□□ -0.74
BRCC3-203ENST00000369459 SCAPERQ9BY12 1400 aa10.42□□□□□ -0.74
BRCC3-203ENST00000369459 TRAPPC8Q9Y2L5 1435 aa10.42□□□□□ -0.74
BRCC3-203ENST00000369459 IQGAP3Q86VI3 1631 aa10.42□□□□□ -0.74
BRCC3-203ENST00000369459 HNRNPMP52272 730 aaKnown RBP eCLIP10.42□□□□□ -0.74
BRCC3-203ENST00000369459 NAP1L2Q9ULW6 460 aaPredicted RBP10.42□□□□□ -0.74
BRCC3-203ENST00000369459 KIF15Q9NS87 1388 aa10.41□□□□□ -0.74
BRCC3-203ENST00000369459 DENND4BO75064 1496 aaPredicted RBP10.41□□□□□ -0.74
BRCC3-203ENST00000369459 REREQ9P2R6 1566 aa10.4□□□□□ -0.74
BRCC3-203ENST00000369459 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.74
BRCC3-203ENST00000369459 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
BRCC3-203ENST00000369459 TSPOAP1O95153 1857 aa10.39□□□□□ -0.75
BRCC3-203ENST00000369459 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
BRCC3-203ENST00000369459 TMED8Q6PL24 325 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-203ENST00000369459 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.39□□□□□ -0.75
BRCC3-203ENST00000369459 RRP7BPQ9NSQ0 103 aa10.38□□□□□ -0.75
BRCC3-203ENST00000369459 CHIC2Q9UKJ5 165 aa10.38□□□□□ -0.75
BRCC3-203ENST00000369459 SPAG9O60271 1321 aaKnown RBP10.38□□□□□ -0.75
BRCC3-203ENST00000369459 PZPP20742 1482 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
BRCC3-203ENST00000369459 TICAM2Q86XR7 235 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 ZNF592Q92610 1267 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 PRDM10Q9NQV6 1147 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 ABCA6Q8N139 1617 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 VWDEQ8N2E2 1590 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 FAM135AQ9P2D6 1515 aa10.37□□□□□ -0.75
BRCC3-203ENST00000369459 PRDM15P57071 1507 aaPredicted RBP10.36□□□□□ -0.75
BRCC3-203ENST00000369459 DIP2CQ9Y2E4 1556 aa10.36□□□□□ -0.75
BRCC3-203ENST00000369459 CNPY4Q8N129 248 aa10.36□□□□□ -0.75
BRCC3-203ENST00000369459 TET3O43151 1660 aa10.35□□□□□ -0.75
BRCC3-203ENST00000369459 ZC3H13Q5T200 1668 aaKnown RBP10.35□□□□□ -0.75
BRCC3-203ENST00000369459 FAM69CQ0P6D2 419 aa10.35□□□□□ -0.75
BRCC3-203ENST00000369459 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
BRCC3-203ENST00000369459 LMTK2Q8IWU2 1503 aa10.34□□□□□ -0.75
BRCC3-203ENST00000369459 A2MP01023 1474 aa10.33□□□□□ -0.76
BRCC3-203ENST00000369459 PIAS4Q8N2W9 510 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms