RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 TSR1Q2NL82 804 aaKnown RBP19.55■□□□□ 0.72
PRDM1-203ENST00000369096 TPD52L1Q16890 204 aaPredicted RBP19.55■□□□□ 0.72
PRDM1-203ENST00000369096 FRAT2O75474 233 aaPredicted RBP19.54■□□□□ 0.72
PRDM1-203ENST00000369096 ST18O60284 1047 aa19.54■□□□□ 0.72
PRDM1-203ENST00000369096 FBXO3Q9UK99 471 aa19.54■□□□□ 0.72
PRDM1-203ENST00000369096 CCNB3Q8WWL7 1395 aa19.53■□□□□ 0.72
PRDM1-203ENST00000369096 GGT6Q6P531 493 aa19.52■□□□□ 0.72
PRDM1-203ENST00000369096 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
PRDM1-203ENST00000369096 CCDC9Q9Y3X0 531 aaKnown RBP19.5■□□□□ 0.71
PRDM1-203ENST00000369096 BECN2A8MW95 431 aa19.5■□□□□ 0.71
PRDM1-203ENST00000369096 GOLGA6L19H0YKK7 550 aa19.5■□□□□ 0.71
PRDM1-203ENST00000369096 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
PRDM1-203ENST00000369096 TIMELESSQ9UNS1 1208 aa19.49■□□□□ 0.71
PRDM1-203ENST00000369096 GTF2E1P29083 439 aaPredicted RBP19.49■□□□□ 0.71
PRDM1-203ENST00000369096 SYNJ1O43426 1573 aa19.48■□□□□ 0.71
PRDM1-203ENST00000369096 H3BQV1 296 aa19.48■□□□□ 0.71
PRDM1-203ENST00000369096 IFFO2Q5TF58 517 aa19.48■□□□□ 0.71
PRDM1-203ENST00000369096 VPS8Q8N3P4 1428 aa19.48■□□□□ 0.71
PRDM1-203ENST00000369096 GPS2Q13227 327 aa19.48■□□□□ 0.71
PRDM1-203ENST00000369096 VSIG10Q8N0Z9 540 aa19.48■□□□□ 0.71
PRDM1-203ENST00000369096 DDX49Q9Y6V7 483 aaKnown RBP19.47■□□□□ 0.71
PRDM1-203ENST00000369096 FOXD4L6Q3SYB3 417 aaPredicted RBP19.47■□□□□ 0.71
PRDM1-203ENST00000369096 FOXD4L3Q6VB84 417 aaPredicted RBP19.47■□□□□ 0.71
PRDM1-203ENST00000369096 TPM1P09493 284 aa19.47■□□□□ 0.71
PRDM1-203ENST00000369096 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
PRDM1-203ENST00000369096 RALBP1Q15311 655 aa19.46■□□□□ 0.71
PRDM1-203ENST00000369096 CCDC70Q6NSX1 233 aa19.46■□□□□ 0.71
PRDM1-203ENST00000369096 DDX11L8A8MPP1 907 aa19.45■□□□□ 0.7
PRDM1-203ENST00000369096 FAM184AQ8NB25 1140 aa19.45■□□□□ 0.7
PRDM1-203ENST00000369096 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
PRDM1-203ENST00000369096 PKD2Q13563 968 aa19.44■□□□□ 0.7
PRDM1-203ENST00000369096 ZNF592Q92610 1267 aa19.43■□□□□ 0.7
PRDM1-203ENST00000369096 CALRP27797 417 aaKnown RBP19.43■□□□□ 0.7
PRDM1-203ENST00000369096 CENPJQ9HC77 1338 aaPredicted RBP19.43■□□□□ 0.7
PRDM1-203ENST00000369096 ZNF771Q7L3S4 317 aaPredicted RBP19.42■□□□□ 0.7
PRDM1-203ENST00000369096 AKAP17AQ02040 695 aaKnown RBP19.42■□□□□ 0.7
PRDM1-203ENST00000369096 TPM2P07951 284 aa19.41■□□□□ 0.7
PRDM1-203ENST00000369096 IPO7O95373 1038 aaKnown RBP19.41■□□□□ 0.7
PRDM1-203ENST00000369096 ATP6V1DQ9Y5K8 247 aa19.41■□□□□ 0.7
PRDM1-203ENST00000369096 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
PRDM1-203ENST00000369096 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
PRDM1-203ENST00000369096 KIF21BO75037 1637 aa19.41■□□□□ 0.7
PRDM1-203ENST00000369096 RSPH6AQ9H0K4 717 aa19.4■□□□□ 0.7
PRDM1-203ENST00000369096 RILPL2Q969X0 211 aa19.4■□□□□ 0.7
PRDM1-203ENST00000369096 FOXD1Q16676 465 aa19.4■□□□□ 0.7
PRDM1-203ENST00000369096 MCTP1Q6DN14 999 aa19.39■□□□□ 0.69
PRDM1-203ENST00000369096 PCMTD1Q96MG8 357 aaPredicted RBP19.38■□□□□ 0.69
PRDM1-203ENST00000369096 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
PRDM1-203ENST00000369096 RRP12Q5JTH9 1297 aaKnown RBP19.37■□□□□ 0.69
PRDM1-203ENST00000369096 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
PRDM1-203ENST00000369096 LMOD3Q0VAK6 560 aa19.36■□□□□ 0.69
PRDM1-203ENST00000369096 CHMP4CQ96CF2 233 aa19.36■□□□□ 0.69
PRDM1-203ENST00000369096 SLC4A3P48751 1232 aa19.36■□□□□ 0.69
PRDM1-203ENST00000369096 TERF2IPQ9NYB0 399 aa19.36■□□□□ 0.69
PRDM1-203ENST00000369096 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
PRDM1-203ENST00000369096 AMPHP49418 695 aa19.35■□□□□ 0.69
PRDM1-203ENST00000369096 CPLX2Q6PUV4 134 aaKnown RBP19.35■□□□□ 0.69
PRDM1-203ENST00000369096 SYNE3Q6ZMZ3 975 aa19.34■□□□□ 0.69
PRDM1-203ENST00000369096 SKOR2Q2VWA4 1001 aaPredicted RBP19.33■□□□□ 0.69
PRDM1-203ENST00000369096 NGDNQ8NEJ9 315 aaKnown RBP19.33■□□□□ 0.69
PRDM1-203ENST00000369096 HOMER1Q86YM7 354 aa19.33■□□□□ 0.69
PRDM1-203ENST00000369096 TCEAL9Q9UHQ7 104 aa19.33■□□□□ 0.68
PRDM1-203ENST00000369096 ELL2O00472 640 aaPredicted RBP19.32■□□□□ 0.68
PRDM1-203ENST00000369096 RAD21O60216 631 aa19.32■□□□□ 0.68
PRDM1-203ENST00000369096 ANKRD45Q5TZF3 282 aa19.32■□□□□ 0.68
PRDM1-203ENST00000369096 GSE1Q14687 1217 aa19.31■□□□□ 0.68
PRDM1-203ENST00000369096 ANKRD20A12PQ8NF67 263 aa19.31■□□□□ 0.68
PRDM1-203ENST00000369096 KRI1Q8N9T8 703 aaKnown RBP19.31■□□□□ 0.68
PRDM1-203ENST00000369096 FAM13BQ9NYF5 915 aa19.31■□□□□ 0.68
PRDM1-203ENST00000369096 TEX35Q5T0J7 233 aa19.3■□□□□ 0.68
PRDM1-203ENST00000369096 TOP2BQ02880 1626 aa19.3■□□□□ 0.68
PRDM1-203ENST00000369096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.3■□□□□ 0.68
PRDM1-203ENST00000369096 PDE3BQ13370 1112 aa19.3■□□□□ 0.68
PRDM1-203ENST00000369096 NLRP13Q86W25 1043 aa19.3■□□□□ 0.68
PRDM1-203ENST00000369096 CCDC47Q96A33 483 aaKnown RBP19.29■□□□□ 0.68
PRDM1-203ENST00000369096 DIAPH3Q9NSV4 1193 aa19.29■□□□□ 0.68
PRDM1-203ENST00000369096 TRIM29Q14134 588 aa19.28■□□□□ 0.68
PRDM1-203ENST00000369096 BCL2L13Q9BXK5 485 aa19.28■□□□□ 0.68
PRDM1-203ENST00000369096 RRP7AQ9Y3A4 280 aaKnown RBP19.28■□□□□ 0.68
PRDM1-203ENST00000369096 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
PRDM1-203ENST00000369096 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
PRDM1-203ENST00000369096 CUX2O14529 1486 aa19.27■□□□□ 0.67
PRDM1-203ENST00000369096 NUTM2FA1L443 756 aa19.26■□□□□ 0.67
PRDM1-203ENST00000369096 CPLX1O14810 134 aa19.26■□□□□ 0.67
PRDM1-203ENST00000369096 FAM161AQ3B820 660 aa19.26■□□□□ 0.67
PRDM1-203ENST00000369096 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.26■□□□□ 0.67
PRDM1-203ENST00000369096 BICD2Q8TD16 824 aa19.26■□□□□ 0.67
PRDM1-203ENST00000369096 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
PRDM1-203ENST00000369096 ZKSCAN1P17029 563 aaPredicted RBP19.25■□□□□ 0.67
PRDM1-203ENST00000369096 PDE4AP27815 886 aa19.25■□□□□ 0.67
PRDM1-203ENST00000369096 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
PRDM1-203ENST00000369096 CTDP1Q9Y5B0 961 aaPredicted RBP19.24■□□□□ 0.67
PRDM1-203ENST00000369096 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
PRDM1-203ENST00000369096 RUFY1Q96T51 708 aa19.24■□□□□ 0.67
PRDM1-203ENST00000369096 CDR1P51861 262 aa19.23■□□□□ 0.67
PRDM1-203ENST00000369096 EIF3AQ14152 1382 aaKnown RBP19.23■□□□□ 0.67
PRDM1-203ENST00000369096 CENPQQ7L2Z9 268 aaPredicted RBP19.23■□□□□ 0.67
PRDM1-203ENST00000369096 LRRFIP1Q32MZ4 808 aaKnown RBP19.23■□□□□ 0.67
PRDM1-203ENST00000369096 NUP155O75694 1391 aa19.23■□□□□ 0.67
PRDM1-203ENST00000369096 APPP05067 770 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms