RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 KIF15Q9NS87 1388 aa16.95■□□□□ 0.3
SHC1-203ENST00000368449 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
SHC1-203ENST00000368449 ABCA8O94911 1581 aa16.95■□□□□ 0.3
SHC1-203ENST00000368449 ARHGEF12Q9NZN5 1544 aa16.95■□□□□ 0.3
SHC1-203ENST00000368449 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
SHC1-203ENST00000368449 LRPPRCP42704 1394 aaKnown RBP16.94■□□□□ 0.3
SHC1-203ENST00000368449 PTPRGP23470 1445 aa16.93■□□□□ 0.3
SHC1-203ENST00000368449 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
SHC1-203ENST00000368449 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
SHC1-203ENST00000368449 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
SHC1-203ENST00000368449 BRD4O60885 1362 aaPredicted RBP16.9■□□□□ 0.3
SHC1-203ENST00000368449 NBPF1Q3BBV0 1214 aa16.9■□□□□ 0.3
SHC1-203ENST00000368449 SALL2Q9Y467 1007 aaPredicted RBP16.9■□□□□ 0.3
SHC1-203ENST00000368449 RALBP1Q15311 655 aa16.88■□□□□ 0.29
SHC1-203ENST00000368449 RGL3Q3MIN7 710 aa16.88■□□□□ 0.29
SHC1-203ENST00000368449 E9PCH4 1651 aa16.87■□□□□ 0.29
SHC1-203ENST00000368449 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
SHC1-203ENST00000368449 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
SHC1-203ENST00000368449 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
SHC1-203ENST00000368449 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
SHC1-203ENST00000368449 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
SHC1-203ENST00000368449 PLA2R1Q13018 1463 aa16.84■□□□□ 0.29
SHC1-203ENST00000368449 EXOC6Q8TAG9 804 aa16.84■□□□□ 0.29
SHC1-203ENST00000368449 RRP1P56182 461 aaKnown RBP16.83■□□□□ 0.29
SHC1-203ENST00000368449 PARD3Q8TEW0 1356 aa16.83■□□□□ 0.29
SHC1-203ENST00000368449 KTN1Q86UP2 1357 aaKnown RBP16.83■□□□□ 0.28
SHC1-203ENST00000368449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
SHC1-203ENST00000368449 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.28
SHC1-203ENST00000368449 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
SHC1-203ENST00000368449 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
SHC1-203ENST00000368449 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
SHC1-203ENST00000368449 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
SHC1-203ENST00000368449 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
SHC1-203ENST00000368449 RCAN3Q9UKA8 241 aa16.8■□□□□ 0.28
SHC1-203ENST00000368449 DISP3Q9P2K9 1392 aa16.8■□□□□ 0.28
SHC1-203ENST00000368449 TESK2Q96S53 571 aa16.79■□□□□ 0.28
SHC1-203ENST00000368449 A2MP01023 1474 aa16.79■□□□□ 0.28
SHC1-203ENST00000368449 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
SHC1-203ENST00000368449 SYCP2Q9BX26 1530 aa16.77■□□□□ 0.28
SHC1-203ENST00000368449 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.28
SHC1-203ENST00000368449 IPO9Q96P70 1041 aaKnown RBP16.77■□□□□ 0.27
SHC1-203ENST00000368449 PREX2Q70Z35 1606 aa16.76■□□□□ 0.27
SHC1-203ENST00000368449 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
SHC1-203ENST00000368449 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
SHC1-203ENST00000368449 PANK3Q9H999 370 aa16.75■□□□□ 0.27
SHC1-203ENST00000368449 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
SHC1-203ENST00000368449 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
SHC1-203ENST00000368449 RSPH4AQ5TD94 716 aa16.74■□□□□ 0.27
SHC1-203ENST00000368449 PLIN1O60240 522 aa16.74■□□□□ 0.27
SHC1-203ENST00000368449 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
SHC1-203ENST00000368449 RTL5Q5HYW3 569 aaPredicted RBP16.73■□□□□ 0.27
SHC1-203ENST00000368449 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
SHC1-203ENST00000368449 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
SHC1-203ENST00000368449 PRDM15P57071 1507 aaPredicted RBP16.71■□□□□ 0.27
SHC1-203ENST00000368449 UNC13BO14795 1591 aa16.71■□□□□ 0.27
SHC1-203ENST00000368449 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
SHC1-203ENST00000368449 ERBINQ96RT1 1412 aa16.71■□□□□ 0.26
SHC1-203ENST00000368449 SKAP1Q86WV1 359 aa16.7■□□□□ 0.26
SHC1-203ENST00000368449 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
SHC1-203ENST00000368449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHC1-203ENST00000368449 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
SHC1-203ENST00000368449 BLMP54132 1417 aaPredicted RBP16.68■□□□□ 0.26
SHC1-203ENST00000368449 WASHC2CQ9Y4E1 1318 aa16.67■□□□□ 0.26
SHC1-203ENST00000368449 MAST1Q9Y2H9 1570 aa16.67■□□□□ 0.26
SHC1-203ENST00000368449 PDE4AP27815 886 aa16.67■□□□□ 0.26
SHC1-203ENST00000368449 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
SHC1-203ENST00000368449 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
SHC1-203ENST00000368449 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
SHC1-203ENST00000368449 TMF1P82094 1093 aa16.66■□□□□ 0.26
SHC1-203ENST00000368449 LAMC1P11047 1609 aa16.65■□□□□ 0.26
SHC1-203ENST00000368449 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
SHC1-203ENST00000368449 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
SHC1-203ENST00000368449 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
SHC1-203ENST00000368449 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
SHC1-203ENST00000368449 MAGI2Q86UL8 1455 aa16.63■□□□□ 0.25
SHC1-203ENST00000368449 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
SHC1-203ENST00000368449 ATP10AO60312 1499 aa16.63■□□□□ 0.25
SHC1-203ENST00000368449 PLXNC1O60486 1568 aa16.63■□□□□ 0.25
SHC1-203ENST00000368449 ERCC6L2Q5T890 1561 aa16.62■□□□□ 0.25
SHC1-203ENST00000368449 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
SHC1-203ENST00000368449 DUOX2Q9NRD8 1548 aa16.6■□□□□ 0.25
SHC1-203ENST00000368449 INSRP06213 1382 aa16.6■□□□□ 0.25
SHC1-203ENST00000368449 EIF2AK4Q9P2K8 1649 aaKnown RBP16.6■□□□□ 0.25
SHC1-203ENST00000368449 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
SHC1-203ENST00000368449 PLEKHH1Q9ULM0 1364 aa16.59■□□□□ 0.25
SHC1-203ENST00000368449 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
SHC1-203ENST00000368449 MS4A1P11836 297 aa16.58■□□□□ 0.25
SHC1-203ENST00000368449 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.24
SHC1-203ENST00000368449 RNF17Q9BXT8 1623 aaKnown RBP16.57■□□□□ 0.24
SHC1-203ENST00000368449 TRAPPC8Q9Y2L5 1435 aa16.57■□□□□ 0.24
SHC1-203ENST00000368449 LAS1LQ9Y4W2 734 aaKnown RBP16.57■□□□□ 0.24
SHC1-203ENST00000368449 CHD1O14646 1710 aa16.57■□□□□ 0.24
SHC1-203ENST00000368449 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
SHC1-203ENST00000368449 ABCC2Q92887 1545 aa16.55■□□□□ 0.24
SHC1-203ENST00000368449 DUSP27Q5VZP5 1158 aa16.55■□□□□ 0.24
SHC1-203ENST00000368449 PLCH2O75038 1416 aa16.54■□□□□ 0.24
SHC1-203ENST00000368449 NEFMP07197 916 aa16.54■□□□□ 0.24
SHC1-203ENST00000368449 MADDQ8WXG6 1647 aa16.54■□□□□ 0.24
SHC1-203ENST00000368449 SHROOM2Q13796 1616 aa16.53■□□□□ 0.24
SHC1-203ENST00000368449 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms