RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 SNAPC4Q5SXM2 1469 aa6.13□□□□□ -1.43
ECHDC1-205ENST00000368295 RYDENQ9NUL5 291 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-205ENST00000368295 RANGAP1P46060 587 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-205ENST00000368295 COL17A1Q9UMD9 1497 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-205ENST00000368295 HAP1P54257 671 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-205ENST00000368295 NKX1-1Q15270 411 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-205ENST00000368295 ERICH6Q7L0X2 663 aa6.1□□□□□ -1.43
ECHDC1-205ENST00000368295 HOMEZQ8IX15 550 aa6.1□□□□□ -1.43
ECHDC1-205ENST00000368295 CABP2Q9NPB3 220 aa6.1□□□□□ -1.43
ECHDC1-205ENST00000368295 BOLA1Q9Y3E2 137 aa6.09□□□□□ -1.43
ECHDC1-205ENST00000368295 TDRD9Q8NDG6 1382 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-205ENST00000368295 PEG3Q9GZU2 1588 aa6.09□□□□□ -1.43
ECHDC1-205ENST00000368295 TIMELESSQ9UNS1 1208 aa6.09□□□□□ -1.43
ECHDC1-205ENST00000368295 PBX2P40425 430 aa6.08□□□□□ -1.44
ECHDC1-205ENST00000368295 TOPBP1Q92547 1522 aa6.08□□□□□ -1.44
ECHDC1-205ENST00000368295 CFTRP13569 1480 aa6.08□□□□□ -1.44
ECHDC1-205ENST00000368295 SOX12O15370 315 aa6.07□□□□□ -1.44
ECHDC1-205ENST00000368295 GTPBP6O43824 516 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-205ENST00000368295 MROH2BQ7Z745 1585 aa6.07□□□□□ -1.44
ECHDC1-205ENST00000368295 Q6ZNB5 142 aa6.07□□□□□ -1.44
ECHDC1-205ENST00000368295 EFCAB3Q8N7B9 438 aa6.07□□□□□ -1.44
ECHDC1-205ENST00000368295 PCF11O94913 1555 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-205ENST00000368295 SRCAPQ6ZRS2 3230 aa6.06□□□□□ -1.44
ECHDC1-205ENST00000368295 NLRP6P59044 892 aa6.06□□□□□ -1.44
ECHDC1-205ENST00000368295 IFFO2Q5TF58 517 aa6.06□□□□□ -1.44
ECHDC1-205ENST00000368295 TARBP1Q13395 1621 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-205ENST00000368295 RAD54L2Q9Y4B4 1467 aa6.05□□□□□ -1.44
ECHDC1-205ENST00000368295 GPR153Q6NV75 609 aa6.05□□□□□ -1.44
ECHDC1-205ENST00000368295 MFRPQ9BY79 579 aa6.04□□□□□ -1.44
ECHDC1-205ENST00000368295 TOP2BQ02880 1626 aa6.04□□□□□ -1.44
ECHDC1-205ENST00000368295 PTPRMP28827 1452 aa6.03□□□□□ -1.44
ECHDC1-205ENST00000368295 MED1Q15648 1581 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-205ENST00000368295 TULP1O00294 542 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-205ENST00000368295 PHF8Q9UPP1 1060 aa6.03□□□□□ -1.44
ECHDC1-205ENST00000368295 CEP170Q5SW79 1584 aa6.03□□□□□ -1.44
ECHDC1-205ENST00000368295 VSIG10Q8N0Z9 540 aa6.02□□□□□ -1.45
ECHDC1-205ENST00000368295 DPY19L2Q6NUT2 758 aa6.02□□□□□ -1.45
ECHDC1-205ENST00000368295 FBXO22Q8NEZ5 403 aa6.02□□□□□ -1.45
ECHDC1-205ENST00000368295 MAPKBP1O60336 1514 aa6.01□□□□□ -1.45
ECHDC1-205ENST00000368295 ZNF316A6NFI3 1004 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-205ENST00000368295 TSHZ2Q9NRE2 1034 aa6.01□□□□□ -1.45
ECHDC1-205ENST00000368295 PPRC1Q5VV67 1664 aaKnown RBP6□□□□□ -1.45
ECHDC1-205ENST00000368295 TPRNQ4KMQ1 711 aa6□□□□□ -1.45
ECHDC1-205ENST00000368295 A0A0G2JS52 829 aa5.98□□□□□ -1.45
ECHDC1-205ENST00000368295 POLA1P09884 1462 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-205ENST00000368295 KIF21BO75037 1637 aa5.97□□□□□ -1.45
ECHDC1-205ENST00000368295 MS4A4AQ96JQ5 239 aa5.97□□□□□ -1.45
ECHDC1-205ENST00000368295 MAGI1Q96QZ7 1491 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-205ENST00000368295 ADCY10Q96PN6 1610 aa5.96□□□□□ -1.46
ECHDC1-205ENST00000368295 PPP1R37O75864 691 aa5.95□□□□□ -1.46
ECHDC1-205ENST00000368295 SUZ12Q15022 739 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-205ENST00000368295 HSPA1LP34931 641 aa5.95□□□□□ -1.46
ECHDC1-205ENST00000368295 LAPTM4AQ15012 233 aa5.94□□□□□ -1.46
ECHDC1-205ENST00000368295 GTF3C3Q9Y5Q9 886 aa5.94□□□□□ -1.46
ECHDC1-205ENST00000368295 ARSIQ5FYB1 569 aa5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 ADGRD1Q6QNK2 874 aa5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 KDM2AQ9Y2K7 1162 aa5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 PRG4Q92954 1404 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 DNMBPQ6XZF7 1577 aa5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 UBAP1LF5GYI3 381 aa5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 SOGA1O94964 1423 aa5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 GRIN2BQ13224 1484 aa5.93□□□□□ -1.46
ECHDC1-205ENST00000368295 WIZO95785 1651 aa5.92□□□□□ -1.46
ECHDC1-205ENST00000368295 RGS17Q9UGC6 210 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-205ENST00000368295 TK2O00142 265 aa5.91□□□□□ -1.46
ECHDC1-205ENST00000368295 CADPS2Q86UW7 1296 aa5.91□□□□□ -1.46
ECHDC1-205ENST00000368295 ADAMTSL3P82987 1691 aa5.91□□□□□ -1.46
ECHDC1-205ENST00000368295 SHROOM2Q13796 1616 aa5.9□□□□□ -1.46
ECHDC1-205ENST00000368295 MADDQ8WXG6 1647 aa5.9□□□□□ -1.47
ECHDC1-205ENST00000368295 MICALL2Q8IY33 904 aa5.89□□□□□ -1.47
ECHDC1-205ENST00000368295 WDR70Q9NW82 654 aa5.89□□□□□ -1.47
ECHDC1-205ENST00000368295 KCTD12Q96CX2 325 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-205ENST00000368295 LTBP4Q8N2S1 1624 aa5.88□□□□□ -1.47
ECHDC1-205ENST00000368295 GRIN2AQ12879 1464 aa5.87□□□□□ -1.47
ECHDC1-205ENST00000368295 SETD1AO15047 1707 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-205ENST00000368295 NUP160Q12769 1436 aa5.87□□□□□ -1.47
ECHDC1-205ENST00000368295 PDE4AP27815 886 aa5.87□□□□□ -1.47
ECHDC1-205ENST00000368295 PIP4K2BP78356 416 aa5.87□□□□□ -1.47
ECHDC1-205ENST00000368295 TRAF7Q6Q0C0 670 aa5.87□□□□□ -1.47
ECHDC1-205ENST00000368295 STAC3Q96MF2 364 aa5.87□□□□□ -1.47
ECHDC1-205ENST00000368295 ASXL2Q76L83 1435 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 ARHGAP33O14559 1287 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 POTEEQ6S8J3 1075 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 AXIN2Q9Y2T1 843 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 ABCC8Q09428 1581 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 HRO43593 1189 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 POTEAQ6S8J7 498 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 TMEM92Q6UXU6 159 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 CRISPLD2Q9H0B8 497 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 PODXL2Q9NZ53 605 aa5.86□□□□□ -1.47
ECHDC1-205ENST00000368295 P3H3Q8IVL6 736 aa5.85□□□□□ -1.47
ECHDC1-205ENST00000368295 ZNF775Q96BV0 537 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-205ENST00000368295 RIMS1Q86UR5 1692 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-205ENST00000368295 ARID4BQ4LE39 1312 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-205ENST00000368295 MFSD10Q14728 455 aa5.84□□□□□ -1.47
ECHDC1-205ENST00000368295 JPH4Q96JJ6 628 aa5.84□□□□□ -1.47
ECHDC1-205ENST00000368295 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
ECHDC1-205ENST00000368295 NCKAP5LQ9HCH0 1330 aa5.84□□□□□ -1.47
ECHDC1-205ENST00000368295 STRCQ7RTU9 1775 aa5.84□□□□□ -1.47
ECHDC1-205ENST00000368295 GLI2P10070 1586 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms