RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
ECHDC1-202ENST00000368289 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
ECHDC1-202ENST00000368289 UACAQ9BZF9 1416 aa11.02□□□□□ -0.64
ECHDC1-202ENST00000368289 IER5LQ5T953 404 aa11.02□□□□□ -0.65
ECHDC1-202ENST00000368289 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
ECHDC1-202ENST00000368289 CD109Q6YHK3 1445 aa11.01□□□□□ -0.65
ECHDC1-202ENST00000368289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.653e-7■■□□□ 13.1
ECHDC1-202ENST00000368289 LTBP4Q8N2S1 1624 aa11.01□□□□□ -0.65
ECHDC1-202ENST00000368289 ARAP3Q8WWN8 1544 aa10.99□□□□□ -0.65
ECHDC1-202ENST00000368289 STRCQ7RTU9 1775 aa10.99□□□□□ -0.65
ECHDC1-202ENST00000368289 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
ECHDC1-202ENST00000368289 RAPGEF3O95398 923 aa10.98□□□□□ -0.65
ECHDC1-202ENST00000368289 RIMS1Q86UR5 1692 aaKnown RBP10.98□□□□□ -0.65
ECHDC1-202ENST00000368289 YEATS2Q9ULM3 1422 aa10.97□□□□□ -0.65
ECHDC1-202ENST00000368289 WDR7Q9Y4E6 1490 aa10.97□□□□□ -0.65
ECHDC1-202ENST00000368289 ZCCHC11Q5TAX3 1644 aaKnown RBP10.97□□□□□ -0.65
ECHDC1-202ENST00000368289 SLC39A7Q92504 469 aa10.96□□□□□ -0.65
ECHDC1-202ENST00000368289 MED1Q15648 1581 aaPredicted RBP10.95□□□□□ -0.66
ECHDC1-202ENST00000368289 OCEL1Q9H607 264 aa10.95□□□□□ -0.66
ECHDC1-202ENST00000368289 SEC24BO95487 1268 aa10.93□□□□□ -0.66
ECHDC1-202ENST00000368289 C7P10643 843 aa10.93□□□□□ -0.66
ECHDC1-202ENST00000368289 PLCG2P16885 1265 aa10.93□□□□□ -0.66
ECHDC1-202ENST00000368289 MS4A4AQ96JQ5 239 aa10.93□□□□□ -0.66
ECHDC1-202ENST00000368289 KCNH8Q96L42 1107 aa10.93□□□□□ -0.66
ECHDC1-202ENST00000368289 DISP1Q96F81 1524 aa10.93□□□□□ -0.66
ECHDC1-202ENST00000368289 ARID4BQ4LE39 1312 aaPredicted RBP10.92□□□□□ -0.66
ECHDC1-202ENST00000368289 IRX5P78411 483 aaPredicted RBP10.92□□□□□ -0.66
ECHDC1-202ENST00000368289 IGF1RP08069 1367 aa10.91□□□□□ -0.66
ECHDC1-202ENST00000368289 PPP1R37O75864 691 aa10.91□□□□□ -0.66
ECHDC1-202ENST00000368289 SIGLEC1Q9BZZ2 1709 aa10.91□□□□□ -0.66
ECHDC1-202ENST00000368289 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.66
ECHDC1-202ENST00000368289 CFAP43Q8NDM7 1665 aa10.9□□□□□ -0.66
ECHDC1-202ENST00000368289 IQSEC2Q5JU85 1478 aa10.9□□□□□ -0.66
ECHDC1-202ENST00000368289 G3V3G9 751 aa10.9□□□□□ -0.66
ECHDC1-202ENST00000368289 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
ECHDC1-202ENST00000368289 BIVM-ERCC5R4GMW8 1640 aa10.88□□□□□ -0.67
ECHDC1-202ENST00000368289 PTPRTO14522 1441 aa10.88□□□□□ -0.67
ECHDC1-202ENST00000368289 HSPA1LP34931 641 aa10.88□□□□□ -0.67
ECHDC1-202ENST00000368289 CARMIL2Q6F5E8 1435 aa10.88□□□□□ -0.67
ECHDC1-202ENST00000368289 L3MBTL3Q96JM7 780 aaPredicted RBP10.88□□□□□ -0.67
ECHDC1-202ENST00000368289 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
ECHDC1-202ENST00000368289 CEBPAP49715 358 aaPredicted RBP10.87□□□□□ -0.67
ECHDC1-202ENST00000368289 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
ECHDC1-202ENST00000368289 RGS17Q9UGC6 210 aaPredicted RBP10.87□□□□□ -0.67
ECHDC1-202ENST00000368289 UBAP1LF5GYI3 381 aa10.86□□□□□ -0.67
ECHDC1-202ENST00000368289 METRNQ9UJH8 293 aa10.86□□□□□ -0.67
ECHDC1-202ENST00000368289 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
ECHDC1-202ENST00000368289 WDR70Q9NW82 654 aa10.83□□□□□ -0.68
ECHDC1-202ENST00000368289 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
ECHDC1-202ENST00000368289 BOLA1Q9Y3E2 137 aa10.82□□□□□ -0.68
ECHDC1-202ENST00000368289 PDE4AP27815 886 aa10.81□□□□□ -0.68
ECHDC1-202ENST00000368289 TTC37Q6PGP7 1564 aa10.81□□□□□ -0.68
ECHDC1-202ENST00000368289 ARHGEF40Q8TER5 1519 aa10.8□□□□□ -0.68
ECHDC1-202ENST00000368289 COLQQ9Y215 455 aaPredicted RBP10.8□□□□□ -0.68
ECHDC1-202ENST00000368289 ZNF335Q9H4Z2 1342 aaPredicted RBP10.8□□□□□ -0.68
ECHDC1-202ENST00000368289 MLECQ14165 292 aa10.79□□□□□ -0.68
ECHDC1-202ENST00000368289 MICALL2Q8IY33 904 aa10.79□□□□□ -0.68
ECHDC1-202ENST00000368289 PREX1Q8TCU6 1659 aa10.79□□□□□ -0.68
ECHDC1-202ENST00000368289 PHLDB1Q86UU1 1377 aa10.78□□□□□ -0.68
ECHDC1-202ENST00000368289 CADPS2Q86UW7 1296 aa10.78□□□□□ -0.68
ECHDC1-202ENST00000368289 IQGAP2Q13576 1575 aa10.77□□□□□ -0.69
ECHDC1-202ENST00000368289 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
ECHDC1-202ENST00000368289 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
ECHDC1-202ENST00000368289 NEO1Q92859 1461 aa10.74□□□□□ -0.69
ECHDC1-202ENST00000368289 ARHGEF12Q9NZN5 1544 aa10.74□□□□□ -0.69
ECHDC1-202ENST00000368289 NCOA1Q15788 1441 aa10.74□□□□□ -0.69
ECHDC1-202ENST00000368289 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
ECHDC1-202ENST00000368289 FHOD3Q2V2M9 1422 aa10.73□□□□□ -0.69
ECHDC1-202ENST00000368289 ABCA8O94911 1581 aa10.73□□□□□ -0.69
ECHDC1-202ENST00000368289 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 LARP6Q9BRS8 491 aaKnown RBP10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 CRISPLD2Q9H0B8 497 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 UHRF1BP1Q6BDS2 1440 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 FANCAO15360 1455 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 KIAA0556O60303 1618 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 ABCA9Q8IUA7 1624 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 FER1L4A9Z1Z3 1794 aa10.72□□□□□ -0.69
ECHDC1-202ENST00000368289 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
ECHDC1-202ENST00000368289 POGZQ7Z3K3 1410 aa10.71□□□□□ -0.69
ECHDC1-202ENST00000368289 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
ECHDC1-202ENST00000368289 ALKQ9UM73 1620 aa10.7□□□□□ -0.7
ECHDC1-202ENST00000368289 NCKAP5LQ9HCH0 1330 aa10.7□□□□□ -0.7
ECHDC1-202ENST00000368289 PIP4K2BP78356 416 aa10.7□□□□□ -0.7
ECHDC1-202ENST00000368289 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
ECHDC1-202ENST00000368289 DDX27Q96GQ7 796 aaKnown RBP10.7□□□□□ -0.7
ECHDC1-202ENST00000368289 GPHNQ9NQX3 736 aaPredicted RBP10.7□□□□□ -0.7
ECHDC1-202ENST00000368289 RICTORQ6R327 1708 aa10.7□□□□□ -0.7
ECHDC1-202ENST00000368289 AKNAQ7Z591 1439 aa10.69□□□□□ -0.7
ECHDC1-202ENST00000368289 ARID3CA6NKF2 412 aa10.69□□□□□ -0.7
ECHDC1-202ENST00000368289 ATP10BO94823 1461 aa10.68□□□□□ -0.7
ECHDC1-202ENST00000368289 MFSD10Q14728 455 aa10.68□□□□□ -0.7
ECHDC1-202ENST00000368289 SETD1BQ9UPS6 1966 aaKnown RBP10.68□□□□□ -0.7
ECHDC1-202ENST00000368289 DENND4BO75064 1496 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-202ENST00000368289 BCANQ96GW7 911 aa10.66□□□□□ -0.7
ECHDC1-202ENST00000368289 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
ECHDC1-202ENST00000368289 ZMYM4Q5VZL5 1548 aa10.65□□□□□ -0.7
ECHDC1-202ENST00000368289 E2F4Q16254 413 aa10.65□□□□□ -0.7
ECHDC1-202ENST00000368289 ZFYVE16Q7Z3T8 1539 aa10.63□□□□□ -0.71
ECHDC1-202ENST00000368289 PPP1R15BQ5SWA1 713 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms